Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 2.3e-287 991.5 490 100.0
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 1.4e-239 832.8 497 84.3
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 4.1e-228 794.7 492 82.3
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 4.6e-227 791.2 491 82.5
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 6.0e-227 790.8 493 81.7
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 1.5e-225 786.2 493 81.9
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 5.6e-209 731.1 492 77.2
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 5.6e-209 731.1 492 77.2
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 5.3e-207 724.5 490 76.3
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 5.4e-204 714.5 491 76.8
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 1.2e-203 713.4 491 75.8
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 2.7e-203 712.2 474 75.1
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 5.8e-198 694.5 498 71.3
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.9e-180 636.3 478 66.7
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 4.2e-180 635.2 494 65.4
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 3.7e-176 622.1 478 64.6
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 1.1e-175 620.5 497 64.0
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 5.3e-175 618.2 478 64.4
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.2e-174 617.1 498 62.9
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.5e-174 616.7 478 65.1
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.5e-174 616.7 480 64.4
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 7.7e-174 614.4 492 64.0
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.0e-173 614.0 478 64.9
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 1.9e-172 609.8 487 63.4
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 1.9e-172 609.8 484 63.4
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.5e-172 609.4 478 64.0
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 9.4e-172 607.4 493 63.7
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 7.9e-171 604.4 500 61.2
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 1.0e-170 604.0 473 63.2
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 1.0e-170 604.0 492 62.2
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 1.0e-170 604.0 495 62.8
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 1.4e-170 603.6 498 62.7
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 2.3e-170 602.8 493 62.1
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 5.1e-170 601.7 491 63.1
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 1.1e-169 600.5 473 63.0
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 4.4e-169 598.6 495 61.6
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 9.7e-169 597.4 494 61.5
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 1.3e-168 597.0 492 62.8
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 3.7e-168 595.5 482 62.7
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 9.1e-167 590.9 490 61.8
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.2e-166 590.5 493 60.6
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.6e-166 589.3 456 64.7
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.3e-165 587.0 470 63.6
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 4.2e-164 582.0 496 60.9
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 4.2e-164 582.0 532 58.6
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 7.2e-164 581.3 491 61.1
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 1.6e-163 580.1 494 60.1
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 2.1e-163 579.7 496 59.7
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 3.6e-163 578.9 496 59.7
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 1.4e-162 577.0 494 59.7
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 2.3e-162 576.2 507 59.4
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 3.9e-162 575.5 494 58.9
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 2.6e-161 572.8 515 58.6
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 1.7e-160 570.1 492 59.1
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 3.7e-160 568.9 479 59.7
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 1.8e-159 566.6 496 59.1
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 2.4e-159 566.2 497 59.2
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.6e-158 563.5 499 58.7
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 2.6e-158 562.8 502 57.6
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 7.7e-158 561.2 489 60.3
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 1.0e-157 560.8 503 57.3
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 1.0e-157 560.8 491 59.3
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 3.2e-156 555.8 492 57.9
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 3.2e-156 555.8 491 57.8
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 3.2e-156 555.8 526 57.6
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 8.0e-155 551.2 490 58.4
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.8e-154 550.1 480 59.6
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 2.3e-154 549.7 500 55.8
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 6.8e-154 548.1 484 57.6
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 1.5e-153 547.0 464 62.9
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 2.0e-153 546.6 449 63.0
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 4.4e-153 545.4 498 58.4
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 1.7e-152 543.5 495 57.2
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.1e-151 540.8 502 57.0
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.1e-151 540.8 493 56.2
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 1.4e-151 540.4 484 57.6
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 1.4e-151 540.4 457 60.0
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 5.4e-151 538.5 494 62.6
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 5.4e-151 538.5 521 54.9
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.5e-150 535.4 452 61.1
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 7.7e-150 534.6 491 57.8
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 3.8e-149 532.3 503 56.3
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 5.0e-149 531.9 508 56.1
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 5.0e-149 531.9 448 61.4
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 2.5e-148 529.6 490 56.3
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 4.2e-148 528.9 470 59.4
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 5.5e-148 528.5 497 56.7
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.2e-145 520.8 491 58.0
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 2.0e-145 520.0 455 59.3
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 2.6e-145 519.6 491 55.0
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.9e-144 515.4 416 61.8
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 4.9e-144 515.4 493 55.4
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 2.8e-139 499.6 510 51.4
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 6.4e-136 488.4 507 52.1
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 4.6e-134 482.3 492 53.9
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 4.6e-134 482.3 431 58.2
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.3e-133 480.7 510 51.0
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.3e-133 480.7 510 51.0
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 7.1e-119 431.8 563 43.9
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 4.6e-118 429.1 487 50.1
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 8.6e-117 424.9 416 57.7
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 5.6e-116 422.2 487 46.6
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 4.1e-111 406.0 313 65.8
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 4.6e-110 402.5 352 59.7
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 5.1e-109 399.1 546 42.3
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 8.7e-101 371.7 416 50.0
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 4.9e-96 355.9 483 42.2
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 6.0e-94 349.0 272 65.4
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.5e-92 343.6 316 57.3
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 1.5e-73 281.2 286 53.8
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.2e-57 228.4 403 35.0
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 1.0e-56 225.3 338 38.5
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 2.5e-55 220.7 304 44.4
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 7.2e-55 219.2 143 71.3
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 8.2e-43 179.1 796 23.7
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 1.4e-37 161.8 334 32.6
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 8.3e-35 152.5 146 54.8
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.6e-33 148.3 95 71.6
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.9e-23 114.8 135 49.6
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 5.7e-20 103.2 74 64.9
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.7e-19 101.7 127 46.5
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 2.3e-13 81.3 60 65.0


User provided reference genes

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