Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 1.2e-84 317.0 224 100.0
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 6.0e-73 278.1 224 87.9
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.6e-70 270.0 224 89.3
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 4.1e-66 255.4 224 84.8
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 5.4e-66 255.0 224 84.4
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 7.8e-65 251.1 224 83.5
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 2.5e-47 193.0 200 83.0
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 3.3e-47 192.6 222 72.1
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 4.3e-47 192.2 225 69.8
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 9.6e-47 191.0 180 87.8
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 1.3e-46 190.7 218 76.1
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 3.6e-46 189.1 176 89.8
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 3.6e-46 189.1 220 75.5
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 1.8e-45 186.8 231 73.6
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 1.8e-45 186.8 176 88.6
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 2.4e-45 186.4 176 89.2
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 3.1e-45 186.0 217 75.6
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.0e-44 183.3 225 72.9
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 7.6e-44 181.4 174 87.4
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 1.7e-43 180.3 222 72.1
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.7e-43 180.3 176 87.5
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 2.9e-43 179.5 224 74.1
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 2.9e-43 179.5 184 84.8
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 3.8e-43 179.1 172 89.0
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 6.4e-43 178.3 225 68.4
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 6.4e-43 178.3 179 85.5
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 1.4e-42 177.2 237 70.9
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 1.9e-42 176.8 194 78.9
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 1.9e-42 176.8 232 73.7
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 4.2e-42 175.6 170 86.5
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 5.4e-42 175.3 228 71.5
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 5.4e-42 175.3 184 83.7
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 9.3e-42 174.5 227 70.5
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 3.5e-41 172.6 171 85.4
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 3.5e-41 172.6 220 68.2
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 4.6e-41 172.2 239 70.7
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.0e-40 171.0 177 82.5
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.3e-40 169.9 225 69.8
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 5.1e-40 168.7 167 85.0
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 1.1e-39 167.5 219 70.8
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 1.1e-39 167.5 171 89.5
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.5e-39 167.2 220 63.6
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 1.9e-39 166.8 172 87.8
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 2.5e-39 166.4 172 86.6
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 3.3e-39 166.0 223 66.8
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 3.3e-39 166.0 233 70.4
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 3.3e-39 166.0 168 82.1
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 5.6e-39 165.2 198 78.8
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 5.6e-39 165.2 172 86.0
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.4e-39 164.9 229 69.0
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 9.6e-39 164.5 223 69.1
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 9.6e-39 164.5 188 79.3
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 2.1e-38 163.3 171 85.4
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 2.1e-38 163.3 230 67.8
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.8e-38 162.2 189 75.7
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 4.8e-38 162.2 166 88.6
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 6.2e-38 161.8 215 72.1
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 1.1e-37 161.0 183 77.6
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 1.1e-37 161.0 208 66.3
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.4e-37 159.8 189 75.1
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.2e-36 157.5 221 67.9
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 1.2e-36 157.5 172 84.9
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 1.5e-36 157.1 165 82.4
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 2.0e-36 156.8 176 83.0
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 9.9e-36 154.5 170 81.2
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 1.7e-35 153.7 173 78.6
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 1.7e-35 153.7 171 81.3
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.7e-35 153.7 231 59.7
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 8.4e-35 151.4 186 72.6
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.4e-34 150.6 210 54.3
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 2.4e-34 149.8 234 68.4
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 3.2e-34 149.4 165 78.8
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 3.5e-33 146.0 162 82.1
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 4.6e-33 145.6 144 93.1
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 1.0e-32 144.4 169 79.3
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 1.8e-32 143.7 228 64.0
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 1.8e-32 143.7 228 64.0
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 1.8e-32 143.7 228 64.0
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 6.7e-32 141.7 142 93.0
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 6.7e-32 141.7 169 78.7
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 5.6e-31 138.7 205 66.3
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 9.6e-31 137.9 207 70.5
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 1.3e-30 137.5 175 66.3
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 1.6e-30 137.1 209 67.0
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 6.2e-30 135.2 169 78.7
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 1.1e-29 134.4 224 62.5
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.4e-29 133.3 172 75.0
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 3.1e-29 132.9 230 63.9
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 4.0e-29 132.5 224 62.1
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 1.2e-28 131.0 180 71.1
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 4.5e-28 129.0 224 63.4
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 1.0e-27 127.9 177 71.8
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 1.7e-27 127.1 170 67.1
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 8.4e-27 124.8 166 72.3
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 1.6e-25 120.6 177 71.2
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 1.1e-23 114.4 242 45.9
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 4.3e-23 112.5 154 77.9
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 3.7e-22 109.4 126 92.9
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 8.2e-22 108.2 109 57.8
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 1.4e-21 107.5 147 72.1
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 1.4e-21 107.5 56 87.5
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 7.6e-20 101.7 107 55.1
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 5.0e-19 99.0 50 90.0
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 8.5e-19 98.2 107 56.1
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 1.4e-18 97.4 107 55.1
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 9.3e-18 94.7 165 70.9
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.3e-16 90.9 64 71.9
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 2.3e-16 90.1 69 68.1
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 4.8e-14 82.4 173 66.5
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 1.1e-13 81.3 38 94.7
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 3.1e-13 79.7 56 75.0
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 4.1e-13 79.3 49 73.5
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 2.0e-12 77.0 38 89.5
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.4e-08 64.3 37 75.7
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 5.1e-08 62.4 56 53.6
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 1.1e-07 61.2 37 75.7


User provided reference genes

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