Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 0.0e+00 1207.6 671 100.0
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 4.0e-290 1001.1 671 83.2
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.9e-284 982.2 673 82.2
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 2.5e-284 981.9 671 82.0
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 9.9e-281 969.9 683 82.1
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 5.0e-232 808.1 675 69.9
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 3.2e-231 805.4 675 69.3
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 2.3e-229 799.3 680 67.9
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 2.8e-219 765.8 674 63.5
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 1.3e-216 756.9 677 66.3
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 1.8e-213 746.5 718 60.4
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 3.9e-213 745.3 694 62.2
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 4.4e-212 741.9 675 65.0
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 5.3e-210 734.9 680 65.0
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 1.6e-209 733.4 676 65.2
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 3.2e-207 725.7 625 64.3
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 9.4e-207 724.2 679 59.8
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 1.2e-206 723.8 699 60.2
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 2.1e-206 723.0 676 61.1
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 2.1e-206 723.0 720 60.3
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 1.8e-205 719.9 584 67.6
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.8e-205 719.9 710 59.9
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 3.3e-204 715.7 714 59.0
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 4.4e-204 715.3 678 60.9
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 5.7e-204 714.9 588 66.2
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 4.8e-203 711.8 679 59.6
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 6.3e-203 711.4 674 63.6
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 8.2e-203 711.1 681 60.1
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 1.8e-202 709.9 679 59.1
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 1.8e-202 709.9 677 60.4
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 7.0e-202 708.0 714 59.0
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.0e-200 704.1 677 59.4
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 1.9e-199 699.9 679 58.5
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 7.2e-199 698.0 680 58.4
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 1.2e-198 697.2 682 59.2
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.7e-198 696.0 712 56.9
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 5.2e-197 691.8 648 60.6
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 7.5e-196 688.0 679 58.9
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 9.8e-196 687.6 678 58.1
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 1.1e-191 674.1 678 59.3
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 5.5e-191 671.8 680 58.5
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 8.0e-190 667.9 675 57.3
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.0e-189 667.5 682 55.6
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 1.0e-189 667.5 676 56.1
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.4e-189 667.2 604 62.4
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 5.2e-189 665.2 681 59.2
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 2.0e-188 663.3 672 58.0
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 2.0e-188 663.3 685 57.1
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 3.7e-187 659.1 681 57.6
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 3.1e-186 656.0 679 56.0
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 3.1e-186 656.0 674 59.2
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 1.2e-185 654.1 679 55.1
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 5.9e-185 651.7 610 59.3
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 4.3e-183 645.6 729 52.4
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 3.1e-181 639.4 685 53.7
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 1.2e-180 637.5 626 56.7
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 1.7e-179 633.6 626 56.7
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 1.4e-178 630.6 681 52.3
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 5.4e-178 628.6 612 55.2
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 1.6e-177 627.1 626 56.1
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 7.8e-177 624.8 684 57.0
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 5.0e-176 622.1 724 49.9
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 7.3e-175 618.2 618 55.2
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 6.2e-174 615.1 611 56.0
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 1.1e-173 614.4 724 54.4
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 1.8e-173 613.6 596 56.5
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 4.0e-173 612.5 588 57.0
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 5.2e-173 612.1 594 56.2
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 2.0e-172 610.1 682 56.6
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 2.2e-171 606.7 554 68.2
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 4.9e-171 605.5 640 56.7
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 1.1e-170 604.4 594 56.6
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 5.4e-170 602.1 614 55.0
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 1.6e-169 600.5 683 51.7
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 2.7e-169 599.7 678 53.5
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 4.6e-169 599.0 599 56.3
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 4.6e-169 599.0 599 56.3
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 2.3e-168 596.7 641 54.9
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.8e-165 587.0 680 50.0
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 2.3e-165 586.6 681 52.0
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.7e-163 580.5 688 51.3
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 2.2e-163 580.1 598 53.2
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 1.6e-161 573.9 626 52.7
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.0e-160 571.2 688 51.3
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 1.6e-158 563.9 674 48.2
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 2.9e-155 553.1 615 52.5
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 1.1e-151 541.2 619 51.9
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 1.9e-151 540.4 696 47.8
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 3.6e-150 536.2 600 53.0
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 3.8e-147 526.2 673 47.3
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 2.4e-141 506.9 587 51.1
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 1.5e-140 504.2 680 47.1
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 4.5e-140 502.7 636 49.4
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 7.1e-138 495.4 674 46.4
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 6.9e-133 478.8 606 46.5
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 1.4e-130 471.1 681 46.3
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 2.5e-130 470.3 353 67.1
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 6.9e-109 399.1 273 72.5
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 4.5e-100 369.8 683 39.2
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 3.6e-97 360.1 382 57.6
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 3.7e-94 350.1 265 66.0
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 4.5e-92 343.2 265 64.9
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 1.0e-91 342.0 576 43.4
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 4.5e-68 263.5 579 35.4
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 2.3e-59 234.6 247 65.6
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 8.3e-54 216.1 672 29.9
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 2.0e-47 194.9 841 25.7
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 9.9e-47 192.6 543 29.1
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.1e-40 172.6 192 54.7
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 1.2e-36 159.1 100 76.0
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 1.6e-33 148.7 937 25.4
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 6.0e-20 103.6 69 71.0
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 3.4e-15 87.8 66 63.6
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 1.3e-09 69.3 61 54.1
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.0e-06 59.7 166 38.0


User provided reference genes

Program Settings