Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 7.4e-153 543.9 283 100.0
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 1.6e-99 366.7 252 78.2
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 1.0e-90 337.4 254 73.2
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 1.5e-84 317.0 253 70.8
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.9e-84 316.6 253 70.8
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 3.3e-84 315.8 253 70.4
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 3.4e-73 279.3 253 62.5
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 3.5e-70 269.2 250 59.2
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 1.1e-68 264.2 258 59.7
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 2.8e-67 259.6 257 58.8
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 1.8e-66 256.9 257 58.0
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 8.9e-66 254.6 252 57.1
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 1.5e-65 253.8 254 59.1
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 1.3e-64 250.8 252 57.5
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 4.9e-64 248.8 254 56.3
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 1.1e-63 247.7 252 56.0
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 1.4e-63 247.3 259 55.2
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 4.1e-63 245.7 218 60.1
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 7.1e-63 245.0 257 56.8
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 3.5e-62 242.7 253 54.5
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.1e-60 237.7 260 55.0
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 1.9e-60 236.9 257 55.3
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 9.5e-60 234.6 254 55.5
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 1.2e-59 234.2 248 55.6
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 6.2e-59 231.9 260 54.2
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 8.1e-59 231.5 252 54.8
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 1.1e-58 231.1 283 50.5
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 1.4e-58 230.7 259 52.5
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.4e-58 230.7 268 49.3
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 3.1e-58 229.6 268 48.9
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 8.9e-58 228.0 254 53.5
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 8.9e-58 228.0 260 52.7
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 1.2e-57 227.6 262 53.4
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 6.4e-56 221.9 166 68.1
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 8.4e-56 221.5 257 49.8
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.4e-55 220.7 193 62.7
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 3.2e-55 219.5 200 61.5
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 1.2e-54 217.6 254 51.6
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 2.1e-54 216.9 252 49.6
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 3.5e-54 216.1 256 53.1
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 6.0e-54 215.3 257 52.1
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 6.0e-54 215.3 255 51.8
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 1.3e-53 214.2 204 58.8
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 6.6e-53 211.8 259 51.0
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 6.6e-53 211.8 220 56.8
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 2.5e-52 209.9 249 50.2
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 7.3e-52 208.4 259 50.6
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 7.3e-52 208.4 256 50.8
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 2.1e-51 206.8 259 50.2
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 4.7e-51 205.7 259 48.6
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 4.7e-51 205.7 257 50.2
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 6.2e-51 205.3 251 49.8
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 1.1e-50 204.5 190 60.0
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 1.4e-50 204.1 252 50.4
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 2.4e-50 203.4 256 54.7
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 6.9e-50 201.8 257 47.1
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 9.0e-50 201.4 258 48.8
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 1.5e-49 200.7 253 49.8
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 2.0e-49 200.3 260 51.2
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 2.0e-49 200.3 187 60.4
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 2.6e-49 199.9 227 52.0
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 3.4e-49 199.5 255 49.0
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 3.4e-49 199.5 293 45.1
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 4.4e-49 199.1 173 60.1
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.7e-48 197.2 255 45.9
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 2.9e-48 196.4 187 55.6
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 6.4e-48 195.3 269 45.7
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 1.4e-47 194.1 162 61.7
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.4e-47 194.1 222 49.5
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 2.4e-47 193.4 310 40.6
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 2.4e-47 193.4 251 47.8
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 7.1e-47 191.8 257 47.5
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 7.1e-47 191.8 247 48.2
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 7.1e-47 191.8 260 50.4
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 7.1e-47 191.8 196 54.6
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 9.3e-47 191.4 204 52.9
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 9.3e-47 191.4 231 50.6
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 2.1e-46 190.3 161 60.2
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 2.7e-46 189.9 196 54.6
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 3.5e-46 189.5 251 50.6
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 4.6e-46 189.1 260 48.5
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 1.0e-45 188.0 196 53.1
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 8.7e-45 184.9 282 44.3
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 8.7e-45 184.9 163 60.1
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 1.1e-44 184.5 206 51.5
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.6e-44 182.2 267 47.9
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.1e-42 177.9 267 48.3
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 1.4e-42 177.6 259 45.9
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.5e-41 174.1 144 63.2
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 2.6e-41 173.3 260 46.2
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 5.8e-41 172.2 256 44.9
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.7e-40 170.6 155 60.0
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 9.3e-39 164.9 155 60.6
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 3.0e-37 159.8 144 58.3
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 8.7e-37 158.3 308 38.3
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 1.1e-36 157.9 274 40.9
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 6.9e-34 148.7 162 52.5
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 3.4e-33 146.4 129 61.2
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.3e-32 144.4 227 43.2
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 8.2e-27 125.2 167 44.3
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 4.9e-24 115.9 161 49.1
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.1e-23 114.8 140 51.4
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 8.7e-21 105.1 124 50.8
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 8.7e-21 105.1 164 36.6
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 1.5e-20 104.4 128 55.5
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 5.3e-18 95.9 248 32.7
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 9.0e-18 95.1 62 72.6
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 1.7e-16 90.9 138 43.5
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 8.5e-16 88.6 122 40.2
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.1e-14 82.4 125 44.0
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 1.0e-13 81.6 119 37.0
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 5.1e-13 79.3 96 43.8
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.5e-12 77.8 82 54.9
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 2.0e-12 77.4 128 33.6
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.0e-12 77.4 99 43.4
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.5e-09 67.8 41 80.5
Sabra02G0016800 Salix brachista HOM05D006975 ORTHO05D008736 3.2e-07 60.1 79 53.2
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 3.6e-06 56.6 54 53.7


User provided reference genes

Program Settings