Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G003200 Theobroma cacao HOM05D005035 ORTHO05D006141 3.2e-83 311.6 146 100.0
Duzib147G0557 Durio zibethinus HOM05D005035 ORTHO05D006141 3.1e-78 295.0 146 93.8
Gohir.D07G224700 Gossypium hirsutum HOM05D005035 ORTHO05D006141 4.4e-77 291.2 146 93.8
Gohir.A07G217600 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.3e-76 289.7 146 93.2
Gohir.A09G024500 Gossypium hirsutum HOM05D005035 ORTHO05D006141 3.8e-76 288.1 146 93.2
COL.COLO4_06152 Corchorus olitorius HOM05D005035 ORTHO05D006141 3.9e-73 278.1 132 96.2
Duzib264G0892 Durio zibethinus HOM05D005035 ORTHO05D006141 1.1e-72 276.6 131 96.2
Thhalv10027982m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 9.6e-72 273.5 146 87.7
Manes.15G180500 Manihot esculenta HOM05D005035 ORTHO05D006141 1.2e-71 273.1 150 86.0
Sp7g01920 Schrenkiella parvula HOM05D005035 ORTHO05D006141 1.2e-71 273.1 146 87.0
AL3G42320 Arabidopsis lyrata HOM05D005035 ORTHO05D006141 3.6e-71 271.6 147 87.1
AT2G04700 Arabidopsis thaliana HOM05D005035 ORTHO05D006141 4.7e-71 271.2 147 87.1
Carub.0003s2630 Capsella rubella HOM05D005035 ORTHO05D006141 4.7e-71 271.2 147 86.4
Gorai.001G259100 Gossypium raimondii HOM05D005035 ORTHO05D006141 3.1e-70 268.5 131 94.7
Manes.17G120300 Manihot esculenta HOM05D005035 ORTHO05D006141 4.4e-69 264.6 150 82.7
Aa31LG9G1530 Aethionema arabicum HOM05D005035 ORTHO05D006141 1.3e-68 263.1 146 82.9
BcaB06g27429 Brassica carinata HOM05D005035 ORTHO05D006141 1.7e-68 262.7 146 84.9
BraA04t16958Z Brassica rapa HOM05D005035 ORTHO05D006141 1.7e-68 262.7 146 84.9
A04p12970 Brassica napus HOM05D005035 ORTHO05D006141 2.2e-68 262.3 146 84.2
TWI56G1217 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 8.4e-68 260.4 146 81.5
TWI36G0797 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 1.4e-67 259.6 146 80.8
Sp2g17120 Schrenkiella parvula HOM05D005035 ORTHO05D006141 1.9e-67 259.2 147 84.4
BolC4t26254H Brassica oleracea HOM05D005035 ORTHO05D006141 4.2e-67 258.1 147 84.4
Thhalv10005082m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 4.2e-67 258.1 148 84.5
THA.LOC104805419 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 7.1e-67 257.3 146 82.2
GSVIVG01032540001 Vitis vinifera HOM05D005035 ORTHO05D006141 2.7e-66 255.4 146 81.5
CANSAT21G0423 Cannabis sativa HOM05D005035 ORTHO05D006141 4.6e-66 254.6 146 82.9
Nitab4.5_0007185g0060 Nicotiana tabacum HOM05D005035 ORTHO05D006141 6.0e-66 254.2 147 84.4
vmacro05790 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 6.0e-66 254.2 145 82.1
CAN.G206.60 Capsicum annuum HOM05D005035 ORTHO05D006141 7.8e-66 253.8 147 84.4
Potri.001G350900 Populus trichocarpa HOM05D005035 ORTHO05D006141 3.0e-65 251.9 144 82.6
RcHm_v2.0_Chr2g0170331 Rosa chinensis HOM05D005035 ORTHO05D006141 3.0e-65 251.9 147 81.0
Nitab4.5_0001952g0210 Nicotiana tabacum HOM05D005035 ORTHO05D006141 3.9e-65 251.5 147 84.4
CiPaw.03G034300 Carya illinoinensis HOM05D005035 ORTHO05D006141 6.6e-65 250.8 148 81.1
Cfa007472 Carpinus fangiana HOM05D005035 ORTHO05D006141 1.9e-64 249.2 148 80.4
FvH4_6g50060 Fragaria vesca HOM05D005035 ORTHO05D006141 1.9e-64 249.2 147 79.6
Solyc02g087230.3 Solanum lycopersicum HOM05D005035 ORTHO05D006141 2.5e-64 248.8 148 83.8
Sopen02g031970 Solanum pennellii HOM05D005035 ORTHO05D006141 2.5e-64 248.8 148 83.8
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 4.3e-64 248.1 146 78.8
Eucgr.J02172 Eucalyptus grandis HOM05D005035 ORTHO05D006141 2.1e-63 245.7 146 80.8
Sc06g0002600 Simmondsia chinensis HOM05D005035 ORTHO05D006141 2.8e-63 245.4 144 79.2
Nn4g22913 Nelumbo nucifera HOM05D005035 ORTHO05D006141 3.6e-63 245.0 146 78.1
Peaxi162Scf00129g00821 Petunia axillaris HOM05D005035 ORTHO05D006141 3.6e-63 245.0 148 83.1
Prupe.3G278500 Prunus persica HOM05D005035 ORTHO05D006141 4.8e-63 244.6 147 78.2
TAR371G0568 Trochodendron aralioides HOM05D005035 ORTHO05D006141 4.8e-63 244.6 146 80.8
Aqoxy3G00882 Aquilegia oxysepala HOM05D005035 ORTHO05D006141 6.2e-63 244.2 126 89.7
TAR484G0003 Trochodendron aralioides HOM05D005035 ORTHO05D006141 6.2e-63 244.2 146 80.1
TAR629G3150 Trochodendron aralioides HOM05D005035 ORTHO05D006141 6.2e-63 244.2 146 80.1
MD09G1039900 Malus domestica HOM05D005035 ORTHO05D006141 1.1e-62 243.4 147 78.2
Actinidia06042 Actinidia chinensis HOM05D005035 ORTHO05D006141 1.4e-62 243.0 145 80.0
PGR083G2790 Punica granatum HOM05D005035 ORTHO05D006141 1.4e-62 243.0 148 79.1
CSS0048749 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.4e-62 242.3 148 77.7
PSO591G0214 Papaver somniferum HOM05D005035 ORTHO05D006141 2.4e-62 242.3 146 78.8
MD17G1040500 Malus domestica HOM05D005035 ORTHO05D006141 3.1e-62 241.9 147 77.6
PSO832G3976 Papaver somniferum HOM05D005035 ORTHO05D006141 3.1e-62 241.9 146 78.8
Ciclev10013034m.g Citrus clementina HOM05D005035 ORTHO05D006141 4.0e-62 241.5 150 76.0
MSTRG.3309 Avicennia marina HOM05D005035 ORTHO05D006141 5.3e-62 241.1 147 78.9
Glyma.19G013800 Glycine max HOM05D005035 ORTHO05D006141 5.3e-62 241.1 146 76.7
Lalb_Chr21g0319261 Lupinus albus HOM05D005035 ORTHO05D006141 6.9e-62 240.7 146 75.3
Glyma.13G069100 Glycine max HOM05D005035 ORTHO05D006141 9.0e-62 240.4 146 76.7
MELO3C021510.2 Cucumis melo HOM05D005035 ORTHO05D006141 2.0e-61 239.2 149 77.2
Actinidia33975 Actinidia chinensis HOM05D005035 ORTHO05D006141 2.6e-61 238.8 148 76.4
Migut.H00159 Erythranthe guttata HOM05D005035 ORTHO05D006141 2.6e-61 238.8 144 79.9
Lalb_Chr02g0159811 Lupinus albus HOM05D005035 ORTHO05D006141 3.4e-61 238.4 146 75.3
CsaV3_5G037480 Cucumis sativus L. HOM05D005035 ORTHO05D006141 4.5e-61 238.0 151 76.8
Migut.K01356 Erythranthe guttata HOM05D005035 ORTHO05D006141 5.8e-61 237.7 135 83.0
MBI14_g12780_MAGBIO Magnolia biondii HOM05D005035 ORTHO05D006141 5.8e-61 237.7 146 79.5
DCAR_011194 Daucus carota HOM05D005035 ORTHO05D006141 9.9e-61 236.9 127 86.6
Rhsim10G0028700 Rhododendron simsii HOM05D005035 ORTHO05D006141 1.3e-60 236.5 157 73.2
Cc07_g02630 Coffea canephora HOM05D005035 ORTHO05D006141 2.9e-60 235.3 143 76.9
Sabra16G0230300 Salix brachista HOM05D005035 ORTHO05D006141 3.8e-60 235.0 144 77.8
Ca_04227_v3 Cicer arietinum L. HOM05D005035 ORTHO05D006141 6.4e-60 234.2 146 74.7
Phvul.004G020500 Phaseolus vulgaris HOM05D005035 ORTHO05D006141 6.4e-60 234.2 146 73.3
Lalb_Chr06g0176451 Lupinus albus HOM05D005035 ORTHO05D006141 1.1e-59 233.4 146 74.7
HanXRQChr17g0548081 Helianthus annuus HOM05D005035 ORTHO05D006141 1.4e-59 233.0 137 81.0
Lj2g0024232 Lotus japonicus HOM05D005035 ORTHO05D006141 1.4e-59 233.0 147 74.1
Rhsim10G0028000 Rhododendron simsii HOM05D005035 ORTHO05D006141 1.4e-59 233.0 166 69.3
SalBow1G8037 Salvia bowleyana HOM05D005035 ORTHO05D006141 1.4e-59 233.0 151 74.8
SGA_v2.0_scaffold30G12503 Striga asiatica HOM05D005035 ORTHO05D006141 1.9e-59 232.6 135 80.7
Lsat_1_v5_gn_0_16560 Lactuca sativa HOM05D005035 ORTHO05D006141 3.2e-59 231.9 135 78.5
MSTRG.23981 Avicennia marina HOM05D005035 ORTHO05D006141 5.4e-59 231.1 146 76.7
TPR.G31460 Trifolium pratense HOM05D005035 ORTHO05D006141 7.1e-59 230.7 146 74.0
EL10Ac7g18004 Beta vulgaris HOM05D005035 ORTHO05D006141 1.6e-58 229.6 147 75.5
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.6e-58 229.6 134 79.1
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.6e-58 229.6 134 79.1
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.6e-58 229.6 134 79.1
CDE04G0448 Ceratophyllum demersum HOM05D005035 ORTHO05D006141 2.1e-58 229.2 146 76.0
Medtr6g008220 Medicago truncatula HOM05D005035 ORTHO05D006141 2.1e-58 229.2 146 74.0
QL93p0205_0142 Quercus lobata HOM05D005035 ORTHO05D006141 4.6e-58 228.0 152 70.4
ECA246G3539 Erigeron canadensis HOM05D005035 ORTHO05D006141 1.3e-57 226.5 135 78.5
HPP92_003737 Vanilla planifolia HOM05D005035 ORTHO05D006141 3.9e-57 224.9 141 73.0
Hund20034 Selenicereus undatus HOM05D005035 ORTHO05D006141 1.1e-56 223.4 129 79.1
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis HOM05D005035 ORTHO05D006141 1.5e-56 223.0 118 83.9
Mapoly0037s0068 Marchantia polymorpha HOM05D005035 ORTHO05D006141 2.5e-56 222.2 125 80.0
Lsat_1_v5_gn_4_180660 Lactuca sativa HOM05D005035 ORTHO05D006141 4.3e-56 221.5 132 79.5
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla HOM05D005035 ORTHO05D006141 5.6e-56 221.1 134 76.1
unitig_62.g23432 Utricularia gibba HOM05D005035 ORTHO05D006141 9.6e-56 220.3 131 79.4
ClCG00G001700 Citrullus lanatus HOM05D005035 ORTHO05D006141 2.1e-55 219.2 157 66.9
ClCG09G018640 Citrullus lanatus HOM05D005035 ORTHO05D006141 2.1e-55 219.2 157 66.9
unitig_52.g17602 Utricularia gibba HOM05D005035 ORTHO05D006141 6.2e-55 217.6 131 76.3
Gorai.006G028000 Gossypium raimondii HOM05D005035 ORTHO05D006141 1.1e-54 216.9 111 91.0
Psat1g079560 Pisum sativum HOM05D005035 ORTHO05D006141 4.0e-54 214.9 121 78.5
Sed0002098 Sechium edule HOM05D005035 ORTHO05D006141 4.0e-54 214.9 137 75.9
SMO147G0038 Selaginella moellendorffii HOM05D005035 ORTHO05D006141 4.0e-54 214.9 112 83.9
Pp3c4_19340 Physcomitrium patens HOM05D005035 ORTHO05D006141 1.2e-53 213.4 136 73.5
ATR1101G065 Amborella trichopoda HOM05D005035 ORTHO05D006141 2.0e-53 212.6 104 92.3
Os09g0249900 Oryza sativa ssp. japonica HOM05D005035 ORTHO05D006141 5.8e-53 211.1 116 81.0
VMungo0464G2121 Vigna mungo HOM05D005035 ORTHO05D006141 2.9e-52 208.8 150 68.0
Zm00001eb373700 Zea mays HOM05D005035 ORTHO05D006141 4.9e-52 208.0 111 82.9
Pp3c3_28450 Physcomitrium patens HOM05D005035 ORTHO05D006141 8.4e-52 207.2 138 68.8
MCO16G017 Micromonas commoda HOM05D005035 ORTHO05D006141 9.3e-51 203.8 118 75.4
CARHR102650 Cardamine hirsuta HOM05D005035 ORTHO05D006141 4.6e-50 201.4 112 84.8
THA.LOC104822811 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 4.6e-50 201.4 105 85.7
Cre03.g193950 Chlamydomonas reinhardtii HOM05D005035 ORTHO05D006141 1.0e-49 200.3 120 74.2
Haze_14625 Corylus avellana HOM05D005035 ORTHO05D006141 3.9e-49 198.4 153 68.0
AUR62022118 Chenopodium quinoa HOM05D005035 ORTHO05D006141 5.6e-48 194.5 104 80.8
AUR62041855 Chenopodium quinoa HOM05D005035 ORTHO05D006141 7.4e-48 194.1 168 59.5
AUR62001211 Chenopodium quinoa HOM05D005035 ORTHO05D006141 1.6e-47 193.0 104 79.8
PRCOL_00001533 Prasinoderma coloniale HOM05D005035 ORTHO05D006141 4.0e-46 188.3 108 75.0
CSS0001095 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.0e-45 186.0 149 65.1
CSS0000898 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 3.8e-44 181.8 153 63.4
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea HOM05D005035 ORTHO05D006141 8.4e-44 180.6 149 61.7
CBR_g4436 Chara braunii HOM05D005035 ORTHO05D006141 7.1e-43 177.6 89 85.4
Atru.chr8.2413 Acer truncatum HOM05D005035 ORTHO05D006141 1.3e-41 173.3 152 61.8
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea HOM05D005035 ORTHO05D006141 2.5e-40 169.1 83 89.2
SEGI_15320 Sequoiadendron giganteum HOM05D005035 ORTHO05D006141 1.6e-39 166.4 94 84.0
Gohir.D09G023800 Gossypium hirsutum HOM05D005035 ORTHO05D006141 3.4e-37 158.7 86 89.5
AUR62032082 Chenopodium quinoa HOM05D005035 ORTHO05D006141 5.9e-37 157.9 108 71.3
QL02p078168 Quercus lobata HOM05D005035 ORTHO05D006141 2.2e-36 156.0 78 82.1
Nn3g17009 Nelumbo nucifera HOM05D005035 ORTHO05D006141 1.6e-34 149.8 75 92.0
C04p46660 Brassica napus HOM05D005035 ORTHO05D006141 3.4e-29 132.1 61 91.8
AUR62026990 Chenopodium quinoa HOM05D005035 ORTHO05D006141 3.8e-28 128.6 104 59.6
Rhsim08G0061500 Rhododendron simsii HOM05D005035 ORTHO05D006141 3.6e-26 122.1 143 44.8
BcaB02g11482 Brassica carinata HOM05D005035 ORTHO05D006141 7.0e-22 107.8 72 66.7
Oeu031509.1 Olea europaea HOM05D005035 ORTHO05D006141 2.6e-21 105.9 305 28.9
BcaC04g21225 Brassica carinata HOM05D005035 ORTHO05D006141 4.2e-19 98.6 52 84.6
vmacro18227 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 5.2e-17 91.7 74 70.3
QL02p078176 Quercus lobata HOM05D005035 ORTHO05D006141 8.8e-17 90.9 57 77.2
CSS0035672 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 3.7e-15 85.5 52 69.2
CARHR102660 Cardamine hirsuta HOM05D005035 ORTHO05D006141 3.8e-12 75.5 42 81.0
Nn1g06334 Nelumbo nucifera HOM05D005035 ORTHO05D006141 3.2e-11 72.4 38 89.5
CSS0020716 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.7e-10 69.3 40 70.0
CSS0048463 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 4.7e-10 68.6 49 63.3
Dinv33674 Davidia involucrata HOM05D005035 ORTHO05D006141 2.3e-09 66.2 44 70.5
CSS0011814 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.7e-07 60.1 53 49.1


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