Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 6.2e-100 367.5 187 100.0
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 8.5e-73 277.3 185 78.4
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 1.4e-67 260.0 187 70.6
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 4.5e-66 255.0 185 69.7
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 4.5e-66 255.0 187 68.4
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 7.7e-66 254.2 178 73.0
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 7.7e-66 254.2 178 73.0
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 3.8e-65 251.9 185 68.6
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 5.0e-65 251.5 185 70.3
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 5.0e-65 251.5 185 70.3
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 1.1e-64 250.4 178 71.9
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 1.5e-64 250.0 187 66.8
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 3.2e-64 248.8 185 69.7
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 9.4e-64 247.3 187 69.0
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 9.4e-64 247.3 183 68.9
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 1.6e-63 246.5 181 71.8
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 1.0e-62 243.8 181 69.1
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 1.4e-62 243.4 185 67.6
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 6.7e-62 241.1 185 66.5
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 6.7e-62 241.1 185 67.6
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 1.1e-61 240.4 184 67.4
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 1.5e-61 240.0 184 65.8
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 2.8e-60 235.7 183 68.9
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 1.1e-59 233.8 179 67.0
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 1.4e-59 233.4 183 68.3
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 1.8e-59 233.0 182 66.5
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 1.8e-59 233.0 175 68.6
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 9.1e-59 230.7 176 67.0
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 1.2e-58 230.3 179 63.1
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.6e-58 229.9 183 66.1
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 5.0e-57 224.9 180 63.9
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 5.0e-57 224.9 176 66.5
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 1.1e-56 223.8 186 63.4
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 3.2e-56 222.2 176 65.3
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 3.2e-56 222.2 220 55.5
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 4.2e-56 221.9 170 67.6
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 4.2e-56 221.9 170 67.6
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 1.2e-55 220.3 183 60.7
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 2.1e-55 219.5 170 68.8
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 8.0e-55 217.6 175 64.0
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 8.0e-55 217.6 175 63.4
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 1.0e-54 217.2 183 61.7
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 3.0e-54 215.7 187 61.0
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 6.8e-54 214.5 182 62.1
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 8.8e-54 214.2 163 68.7
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 2.0e-53 213.0 170 63.5
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.0e-53 213.0 184 59.2
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 9.8e-53 210.7 183 60.7
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 3.7e-52 208.8 176 60.2
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 8.3e-52 207.6 187 60.4
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 8.3e-52 207.6 182 59.9
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 5.4e-51 204.9 183 59.0
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 5.4e-51 204.9 182 59.3
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 9.1e-51 204.1 170 63.5
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 2.7e-50 202.6 196 56.1
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 2.7e-50 202.6 175 60.6
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 5.9e-50 201.4 184 57.1
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 7.7e-50 201.1 175 60.0
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.7e-49 199.9 185 58.4
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 2.2e-49 199.5 175 59.4
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 3.8e-49 198.7 185 58.4
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 3.2e-48 195.7 185 54.6
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 9.4e-48 194.1 175 57.7
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 1.6e-47 193.4 182 56.0
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 2.1e-47 193.0 176 60.2
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 2.1e-47 193.0 184 57.1
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 1.0e-46 190.7 183 55.2
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 1.0e-46 190.7 183 55.2
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 1.4e-46 190.3 185 54.6
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 2.3e-46 189.5 183 54.6
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 2.3e-46 189.5 183 54.6
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 2.3e-46 189.5 183 54.6
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 2.3e-46 189.5 185 57.3
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 6.8e-46 188.0 182 53.3
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 6.8e-46 188.0 185 54.6
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 8.8e-46 187.6 182 54.4
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.2e-45 187.2 182 56.6
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 2.6e-45 186.0 184 54.3
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 4.4e-45 185.3 185 53.5
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 5.7e-45 184.9 185 51.9
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 7.5e-45 184.5 180 52.8
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 7.5e-45 184.5 185 51.9
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 7.5e-45 184.5 132 69.7
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 9.8e-45 184.1 184 53.3
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 1.3e-44 183.7 185 53.0
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 1.7e-44 183.3 186 53.2
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 2.2e-44 183.0 142 65.5
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 2.2e-44 183.0 186 53.2
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 6.3e-44 181.4 179 52.5
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 3.1e-43 179.1 188 53.2
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 7.0e-43 177.9 188 53.2
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 7.0e-43 177.9 188 53.2
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.6e-42 176.8 170 58.2
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 5.9e-42 174.9 179 53.1
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 9.5e-40 167.5 186 49.5
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 1.8e-38 163.3 176 52.3
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 1.7e-36 156.8 130 60.0
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.7e-34 149.4 185 44.3
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 3.5e-34 149.1 186 44.1
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 3.5e-34 149.1 185 47.6
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 5.9e-34 148.3 183 45.9
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 5.6e-32 141.7 173 43.9
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 1.7e-28 130.2 188 43.6
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 2.9e-28 129.4 188 43.1
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-28 129.0 187 39.0
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 2.0e-26 123.2 173 43.9
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 6.0e-26 121.7 130 56.2
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 5.0e-25 118.6 183 43.2
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 2.1e-23 113.2 124 46.8
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 4.7e-23 112.1 196 35.7
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 1.1e-22 110.9 70 78.6
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-22 110.2 186 37.6
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-21 107.1 199 36.2
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-21 105.9 182 34.1
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 8.3e-20 101.3 76 67.1
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 7.1e-19 98.2 185 36.8
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 1.6e-18 97.1 132 41.7
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 7.8e-18 94.7 153 35.3
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 1.0e-17 94.4 174 35.1
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 1.3e-17 94.0 90 52.2
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 3.9e-17 92.4 183 31.1
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 1.9e-16 90.1 129 40.3
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 2.5e-16 89.7 123 47.2
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 7.3e-16 88.2 71 67.6
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 1.2e-15 87.4 175 34.3
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 3.1e-14 82.8 135 37.8
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 4.0e-14 82.4 182 34.1
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-13 80.5 152 32.9
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 2.0e-13 80.1 141 38.3
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 1.7e-12 77.0 185 31.9
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-12 76.6 122 41.0
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 2.2e-12 76.6 169 30.2
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 1.9e-11 73.6 160 31.2
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 5.4e-11 72.0 178 28.7
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 9.2e-11 71.2 133 32.3
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-10 70.9 161 31.1
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 6.0e-10 68.6 139 29.5
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 2.3e-09 66.6 60 58.3
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 5.1e-09 65.5 152 30.9
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 5.1e-09 65.5 73 45.2
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-08 64.3 127 29.9
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 2.5e-08 63.2 194 27.8
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 2.5e-08 63.2 153 30.7
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 3.3e-08 62.8 125 34.4
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 3.3e-08 62.8 121 35.5
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 1.2e-07 60.8 103 36.9
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 1.2e-07 60.8 130 31.5
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.6e-07 60.5 166 26.5
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 6.2e-07 58.5 117 29.1
Atru.chr8.1290 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-06 57.8 128 31.2
Atru.chr6.94 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-06 57.4 64 48.4
Atru.chr12.1394 Acer truncatum HOM05D004737 ORTHO05D005623 2.4e-06 56.6 155 26.5


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