Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 7.5e-80 300.4 150 100.0
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 4.9e-63 244.6 175 76.6
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 5.4e-62 241.1 171 75.4
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 2.3e-60 235.7 158 78.5
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 2.2e-55 219.2 157 75.8
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 3.9e-52 208.4 143 74.1
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 6.6e-52 207.6 113 87.6
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 4.7e-50 201.4 128 78.1
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 4.7e-50 201.4 113 84.1
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 6.2e-50 201.1 112 84.8
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.1e-49 200.3 112 85.7
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 1.4e-49 199.9 112 84.8
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 1.8e-49 199.5 143 67.8
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 1.8e-49 199.5 112 83.9
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 5.2e-49 198.0 145 67.6
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 5.2e-49 198.0 136 73.5
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 5.2e-49 198.0 112 83.9
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 1.2e-48 196.8 135 74.1
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 2.0e-48 196.1 112 80.4
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 2.6e-48 195.7 125 80.0
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 5.8e-48 194.5 136 72.1
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 9.9e-48 193.7 138 71.7
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 3.8e-47 191.8 144 66.0
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 4.9e-47 191.4 132 72.0
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 4.9e-47 191.4 126 76.2
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.4e-46 189.9 112 77.7
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 2.4e-46 189.1 113 81.4
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 3.2e-46 188.7 136 69.1
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 5.4e-46 188.0 140 67.9
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 5.4e-46 188.0 140 65.7
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 7.1e-46 187.6 126 73.0
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 9.3e-46 187.2 126 73.0
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 9.3e-46 187.2 126 73.0
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 9.3e-46 187.2 126 73.0
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 9.3e-46 187.2 126 73.0
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 1.2e-45 186.8 140 65.7
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 1.2e-45 186.8 133 69.2
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 1.6e-45 186.4 112 75.9
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.1e-45 186.0 112 75.0
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 4.6e-45 184.9 108 83.3
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 6.0e-45 184.5 145 65.5
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 1.0e-44 183.7 126 71.4
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 1.7e-44 183.0 140 65.7
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.7e-44 183.0 162 61.1
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.7e-44 183.0 136 66.2
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 2.3e-44 182.6 106 87.7
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 3.9e-44 181.8 140 64.3
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 3.9e-44 181.8 154 63.0
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 6.6e-44 181.0 109 78.0
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 6.6e-44 181.0 126 69.8
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 8.7e-44 180.6 107 79.4
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 8.7e-44 180.6 109 76.1
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 8.7e-44 180.6 109 79.8
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 1.1e-43 180.3 136 69.1
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 1.5e-43 179.9 140 63.6
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 5.6e-43 177.9 140 63.6
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 5.6e-43 177.9 107 75.7
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 5.6e-43 177.9 111 74.8
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 9.6e-43 177.2 164 57.9
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 9.6e-43 177.2 109 80.7
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 9.6e-43 177.2 109 78.9
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 9.6e-43 177.2 109 78.9
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 9.6e-43 177.2 109 78.9
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 1.6e-42 176.4 108 79.6
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.6e-42 176.4 109 75.2
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 3.6e-42 175.3 159 58.5
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 3.6e-42 175.3 161 56.5
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 4.8e-42 174.9 102 77.5
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 4.8e-42 174.9 102 77.5
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 4.0e-41 171.8 109 75.2
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 9.0e-41 170.6 123 73.2
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 2.6e-40 169.1 138 60.1
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 3.4e-40 168.7 170 55.3
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 5.8e-40 167.9 112 72.3
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.2e-39 166.0 142 59.2
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.2e-39 166.0 111 71.2
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 2.9e-39 165.6 109 70.6
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 1.1e-38 163.7 110 70.0
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 1.4e-38 163.3 112 70.5
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.2e-37 160.2 155 54.8
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 7.9e-37 157.5 128 64.1
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 1.0e-36 157.1 108 69.4
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.3e-36 156.0 140 57.9
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 3.0e-36 155.6 109 68.8
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 1.5e-35 153.3 112 66.1
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 2.0e-32 142.9 113 68.1
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 3.4e-32 142.1 99 74.7
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 7.6e-32 141.0 105 66.7
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 1.7e-31 139.8 109 60.6
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 2.2e-31 139.4 100 68.0
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 3.8e-31 138.7 109 60.6
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 6.4e-31 137.9 126 54.8
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 7.1e-30 134.4 100 65.0
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 9.3e-30 134.0 100 65.0
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.1e-27 127.1 99 60.6
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 6.2e-26 121.3 102 57.8
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 5.3e-25 118.2 86 62.8
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 2.1e-21 106.3 72 77.8
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.8e-12 76.6 48 81.2
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 2.5e-11 72.8 74 51.4
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 5.9e-08 61.6 83 36.1
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 1.0e-07 60.8 42 66.7
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 1.0e-07 60.8 42 66.7
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 2.5e-06 56.2 98 31.6


User provided reference genes

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