Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 5.8e-192 674.1 350 100.0
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 4.2e-166 588.2 348 87.6
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.1e-153 547.0 328 86.3
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 5.9e-144 514.6 333 80.8
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 5.5e-142 508.1 328 80.2
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.6e-141 506.5 333 79.6
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 8.8e-140 500.7 344 75.9
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.6e-139 499.2 347 75.5
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 7.5e-139 497.7 345 77.1
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 1.3e-138 496.9 344 76.5
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.7e-138 496.5 352 76.4
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 2.0e-136 489.6 342 75.1
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.7e-135 486.5 349 75.6
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 3.3e-134 482.3 340 76.5
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 4.7e-133 478.4 334 76.3
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 4.0e-132 475.3 324 75.9
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 4.9e-130 468.4 335 72.2
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 4.9e-130 468.4 317 74.8
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 6.3e-130 468.0 337 72.4
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 2.9e-127 459.1 323 74.9
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.6e-127 458.0 331 72.2
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 1.5e-126 456.8 330 72.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.5e-126 456.8 330 73.0
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.5e-126 456.8 330 73.0
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.9e-126 456.4 330 72.7
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.3e-126 455.7 330 72.4
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.2e-125 453.8 330 72.4
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 6.1e-125 451.4 334 70.7
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 4.0e-124 448.7 321 69.5
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.5e-123 446.8 329 70.5
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 7.5e-123 444.5 323 69.7
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.3e-122 443.7 346 67.9
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 8.3e-122 441.0 344 65.7
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 2.4e-121 439.5 341 68.0
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 1.6e-120 436.8 327 68.5
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 2.0e-120 436.4 317 69.4
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 4.6e-120 435.3 328 68.9
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 6.0e-120 434.9 327 69.4
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 7.8e-120 434.5 319 69.9
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.0e-119 434.1 320 69.4
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.0e-119 434.1 323 68.4
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.3e-119 433.7 320 69.4
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.3e-119 433.7 317 70.0
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.3e-119 433.7 320 68.8
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.3e-119 433.7 320 68.8
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.7e-119 433.3 344 70.1
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 3.0e-119 432.6 320 69.4
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 4.3e-118 428.7 334 68.6
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 5.6e-118 428.3 320 67.5
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 7.3e-118 427.9 323 68.4
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 1.2e-117 427.2 317 68.5
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 2.8e-117 426.0 340 65.0
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 2.8e-117 426.0 320 66.9
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 4.7e-117 425.2 321 68.5
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 4.7e-117 425.2 336 68.5
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 8.0e-117 424.5 317 67.8
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 1.5e-115 420.2 317 66.9
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 1.5e-115 420.2 317 66.9
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 3.4e-115 419.1 319 66.5
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 6.4e-114 414.8 327 66.7
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.1e-113 414.1 326 66.9
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 4.1e-113 412.1 340 64.4
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 9.2e-113 411.0 336 65.8
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.6e-112 410.2 317 66.9
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 2.1e-112 409.8 301 69.4
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 8.6e-111 404.4 332 64.5
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 5.6e-110 401.7 346 62.7
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 2.1e-109 399.8 340 61.8
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 4.7e-109 398.7 330 62.4
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 1.1e-108 397.5 323 63.2
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.4e-108 397.1 321 64.5
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 8.9e-108 394.4 317 62.8
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 2.6e-107 392.9 326 63.5
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 3.7e-106 389.0 330 63.3
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 3.7e-106 389.0 285 68.4
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 9.2e-105 384.4 269 70.3
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.2e-104 384.0 321 62.6
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 1.6e-104 383.6 324 62.7
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 3.3e-102 375.9 330 58.8
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.4e-100 370.5 320 60.0
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 2.9e-98 362.8 336 58.9
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 1.4e-97 360.5 319 59.6
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.1e-96 356.7 265 69.4
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 2.1e-96 356.7 325 58.8
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 2.7e-96 356.3 334 57.8
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 3.6e-93 345.9 326 57.7
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.2e-90 336.7 236 71.2
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 3.9e-87 325.9 333 55.3
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 1.2e-83 314.3 328 52.4
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 2.6e-83 313.2 288 55.9
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.1e-81 307.8 324 51.5
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 1.1e-78 297.7 334 52.1
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 7.4e-78 295.0 322 51.2
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 4.8e-77 292.4 316 49.7
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 1.1e-76 291.2 334 50.9
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 9.0e-68 261.5 176 74.4
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 2.6e-67 260.0 186 69.9
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 2.9e-66 256.5 322 44.7
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 6.5e-66 255.4 204 63.7
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.9e-65 253.8 319 46.4
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.1e-64 250.4 225 61.8
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 1.5e-62 244.2 163 75.5
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.7e-53 214.2 200 55.0
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 4.4e-46 189.5 255 43.5
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 3.9e-39 166.4 112 74.1
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 8.8e-39 165.2 112 73.2
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 9.4e-33 145.2 86 84.9
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 5.5e-25 119.4 269 27.9
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 4.4e-22 109.8 110 57.3
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 4.5e-19 99.8 122 42.6
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 4.7e-16 89.7 82 62.2
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 8.0e-08 62.4 79 50.6


User provided reference genes

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