Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 9.4e-211 736.5 344 100.0
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 2.2e-191 672.2 348 90.5
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 3.4e-176 621.7 372 78.2
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 7.5e-176 620.5 373 76.4
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 6.6e-172 607.4 372 77.7
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 1.1e-171 606.7 372 75.8
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 9.5e-171 603.6 372 76.1
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 9.5e-171 603.6 370 76.8
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 3.6e-170 601.7 372 76.1
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 4.7e-170 601.3 372 76.3
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 6.2e-170 600.9 372 75.8
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 1.1e-169 600.1 372 76.1
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 2.3e-169 599.0 372 74.5
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 2.3e-169 599.0 372 76.3
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 3.1e-169 598.6 372 77.2
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 8.9e-169 597.0 373 74.3
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 1.2e-168 596.7 372 74.7
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 1.2e-168 596.7 370 75.7
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 1.5e-168 596.3 373 76.1
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 1.5e-168 596.3 372 75.0
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 2.0e-168 595.9 373 73.7
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 2.6e-168 595.5 372 74.5
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 3.7e-167 591.7 372 76.1
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 4.9e-167 591.3 372 73.7
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 4.9e-167 591.3 371 74.9
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 1.9e-166 589.3 366 75.7
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 2.4e-166 589.0 368 74.2
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.4e-166 589.0 372 72.8
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.1e-166 588.2 372 72.8
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 4.1e-166 588.2 390 71.5
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 7.1e-166 587.4 372 73.4
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 9.2e-166 587.0 372 74.2
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.6e-165 586.3 365 75.3
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 2.7e-165 585.5 372 73.1
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 4.6e-165 584.7 371 73.6
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 7.8e-165 583.9 382 72.3
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 7.8e-165 583.9 372 72.6
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.0e-164 583.6 372 72.6
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 3.9e-164 581.6 368 73.4
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 8.6e-164 580.5 374 71.7
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 1.1e-163 580.1 372 72.6
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 1.5e-163 579.7 368 72.8
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 2.5e-163 578.9 371 71.4
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 2.5e-163 578.9 373 72.1
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 2.5e-163 578.9 372 72.3
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 3.3e-163 578.6 373 72.1
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 4.3e-163 578.2 372 71.2
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 5.6e-163 577.8 365 74.5
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 5.6e-163 577.8 365 74.5
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 5.6e-163 577.8 373 70.8
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 5.6e-163 577.8 371 71.4
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 7.3e-163 577.4 372 72.3
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 1.2e-162 576.6 371 72.2
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 1.6e-162 576.2 369 72.9
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 1.6e-162 576.2 372 73.1
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 1.6e-162 576.2 379 71.2
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 2.1e-162 575.9 371 71.7
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 6.2e-162 574.3 372 72.6
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 6.2e-162 574.3 372 72.3
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 6.2e-162 574.3 372 71.8
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 6.2e-162 574.3 372 71.8
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 3.1e-161 572.0 373 70.0
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 4.0e-161 571.6 368 72.3
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 2.0e-160 569.3 372 69.9
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 1.3e-159 566.6 367 71.7
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 1.7e-159 566.2 366 71.6
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 2.2e-159 565.8 380 70.5
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 3.7e-159 565.1 368 71.5
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 8.3e-159 563.9 372 70.4
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 2.4e-158 562.4 372 69.6
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 3.2e-158 562.0 370 70.3
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 2.7e-157 558.9 372 69.9
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 4.6e-157 558.1 372 68.5
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 3.9e-156 555.1 372 70.4
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 5.6e-155 551.2 372 68.5
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 6.2e-154 547.7 365 70.1
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 2.4e-153 545.8 372 67.5
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 3.1e-153 545.4 357 70.9
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 6.8e-153 544.3 371 67.7
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 5.8e-152 541.2 371 69.0
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 2.2e-151 539.3 368 67.4
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 2.2e-151 539.3 371 67.9
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 2.9e-151 538.9 372 66.9
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 4.9e-151 538.1 371 68.5
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.1e-150 537.0 342 73.4
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 2.4e-150 535.8 375 66.9
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 3.2e-150 535.4 372 67.7
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 3.2e-150 535.4 458 60.3
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 3.2e-150 535.4 375 66.1
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 4.2e-150 535.0 366 67.8
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 7.1e-150 534.3 366 67.2
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 2.1e-149 532.7 369 66.9
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 2.7e-149 532.3 379 68.3
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 4.6e-149 531.6 371 67.4
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 6.0e-149 531.2 372 67.2
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 1.0e-148 530.4 367 67.3
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 1.3e-148 530.0 367 67.0
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 2.3e-148 529.3 401 63.3
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 3.9e-148 528.5 367 67.0
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 1.1e-147 526.9 386 66.1
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 1.5e-147 526.6 422 61.6
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 3.3e-147 525.4 328 73.8
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 9.6e-147 523.9 368 67.1
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 9.6e-147 523.9 371 65.0
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 3.1e-145 518.8 403 63.5
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 3.2e-142 508.8 408 62.5
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 4.6e-141 505.0 371 64.4
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 1.0e-140 503.8 361 64.8
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 3.9e-140 501.9 372 65.1
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 4.3e-139 498.4 371 62.3
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 2.3e-132 476.1 373 59.5
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 3.0e-132 475.7 303 73.6
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 1.5e-131 473.4 370 61.9
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 1.9e-131 473.0 365 60.5
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 2.1e-130 469.5 370 59.7
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 1.2e-128 463.8 274 77.4
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 1.2e-128 463.8 413 56.4
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 5.8e-128 461.5 373 58.4
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.4e-121 440.3 293 68.6
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 3.0e-116 422.5 372 57.8
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 1.9e-115 419.9 385 55.3
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 5.0e-103 378.6 215 80.0
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 7.9e-101 371.3 250 69.2
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.1e-99 367.5 222 74.8
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.0e-96 356.7 221 73.8
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 6.1e-93 345.1 385 47.3
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 3.5e-88 329.3 343 52.2
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 8.5e-87 324.7 380 44.5
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 2.3e-84 316.6 344 48.8
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.0e-83 313.5 204 69.6
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 2.9e-79 299.7 381 41.7
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.9e-78 297.0 165 77.0
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 6.3e-74 282.0 402 39.3
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 6.4e-66 255.4 171 70.2
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 3.6e-53 213.0 170 60.6
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 1.2e-45 188.0 94 87.2
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 3.0e-39 166.8 134 65.7
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 1.7e-34 151.0 477 26.6
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 3.2e-33 146.7 77 87.0
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 5.1e-31 139.4 92 71.7
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 8.7e-23 112.1 79 65.8
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 1.3e-18 98.2 163 36.2
BcaC05g25434 Brassica carinata HOM05D004692 ORTHO05D006291 3.9e-15 86.7 67 59.7
C05p13090 Brassica napus HOM05D004692 ORTHO05D006291 3.9e-15 86.7 67 59.7
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 6.7e-15 85.9 47 80.9
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 8.7e-15 85.5 43 88.4
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 1.1e-14 85.1 45 84.4
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 1.1e-12 78.6 46 73.9
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 1.4e-12 78.2 40 85.0
Cpa.g.c47417 Carica papaya HOM05D004692 ORTHO05D117256 2.5e-06 57.4 27 92.6
Cpa.g.c45305 Carica papaya HOM05D004692 ORTHO05D006291 7.4e-06 55.8 29 69.0
CDE07G1693 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 9.6e-06 55.5 50 56.0


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