Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 1.5e-180 636.3 401 100.0
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 3.0e-152 542.3 402 86.3
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 2.9e-147 525.8 322 91.9
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.9e-134 481.9 362 86.5
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 2.5e-130 469.5 393 79.4
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.9e-126 455.3 363 79.6
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 2.3e-123 446.4 297 77.4
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 3.0e-123 446.0 287 81.5
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.8e-120 436.8 358 76.8
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 4.4e-119 432.2 330 77.3
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.3e-118 430.6 335 77.0
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 3.7e-118 429.1 324 74.4
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 4.1e-117 425.6 322 77.6
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 2.1e-116 423.3 297 74.7
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 3.5e-116 422.5 328 74.1
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 2.3e-115 419.9 297 74.1
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 3.0e-115 419.5 305 74.8
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 6.6e-115 418.3 301 72.8
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.1e-114 417.5 308 74.0
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.2e-113 414.1 300 72.3
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 2.1e-113 413.3 334 74.9
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 6.2e-113 411.8 300 72.0
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 1.1e-112 411.0 298 76.2
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 6.8e-112 408.3 300 72.3
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 4.4e-111 405.6 293 75.1
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 7.6e-111 404.8 336 65.2
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.1e-109 401.0 301 73.1
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 5.4e-109 398.7 299 72.6
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 7.1e-109 398.3 300 73.0
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 2.7e-108 396.4 282 72.0
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 2.7e-108 396.4 302 73.2
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 1.7e-107 393.7 287 74.2
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.5e-106 390.6 277 83.0
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 1.9e-106 390.2 297 72.7
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 3.3e-106 389.4 287 73.5
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 1.6e-105 387.1 286 73.1
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 3.6e-105 386.0 281 74.7
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 8.1e-105 384.8 321 67.3
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 2.4e-104 383.3 262 77.9
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 2.6e-103 379.8 299 69.9
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 3.4e-103 379.4 293 65.9
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 4.4e-103 379.0 300 68.7
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 1.7e-102 377.1 303 70.0
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 3.8e-102 375.9 290 70.7
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 4.9e-102 375.6 237 83.1
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 4.9e-102 375.6 242 82.2
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 8.4e-102 374.8 301 68.1
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 1.1e-101 374.4 292 69.5
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 1.4e-101 374.0 299 67.2
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 5.4e-101 372.1 288 70.5
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 5.4e-101 372.1 288 70.5
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 5.4e-101 372.1 294 69.4
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 7.1e-101 371.7 241 82.6
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 2.7e-100 369.8 301 64.5
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 6.0e-100 368.6 286 70.6
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 7.8e-100 368.2 307 65.8
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 7.8e-100 368.2 298 68.5
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 7.8e-100 368.2 300 68.3
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 2.3e-99 366.7 295 67.8
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 8.7e-99 364.8 314 67.8
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 3.3e-98 362.8 299 67.9
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 5.6e-98 362.1 243 87.7
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.6e-97 360.5 298 68.1
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.2e-95 354.4 279 70.6
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 1.5e-95 354.0 301 66.4
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 2.6e-95 353.2 272 73.5
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 5.8e-95 352.1 292 67.1
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 2.9e-94 349.7 283 68.6
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.6e-92 344.0 217 84.3
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 3.5e-92 342.8 216 84.3
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 2.5e-90 336.7 276 64.9
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 7.4e-90 335.1 306 62.1
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 1.1e-88 331.3 292 63.4
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 5.3e-88 328.9 243 74.1
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 3.5e-84 316.2 234 74.8
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 2.5e-77 293.5 212 74.5
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 3.2e-77 293.1 231 68.0
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 4.2e-77 292.7 242 63.6
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 5.1e-75 285.8 204 75.5
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 1.0e-70 271.6 159 85.5
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 5.7e-66 255.8 245 61.2
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 8.2e-65 251.9 186 75.8
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.8e-64 250.8 242 60.7
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 1.5e-63 247.7 295 49.2
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.4e-61 241.1 196 69.9
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 4.6e-60 236.1 163 76.7
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 1.0e-59 235.0 167 78.4
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.9e-51 206.5 136 77.9
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 3.5e-47 193.4 234 52.1
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 4.8e-41 172.9 183 55.2
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 2.7e-39 167.2 248 38.3
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.8e-32 144.4 82 84.1
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 5.0e-30 136.3 152 47.4
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 4.4e-26 123.2 74 94.6
QL03p065499 Quercus lobata HOM05D007647 ORTHO05D009644 1.3e-09 68.6 74 50.0


User provided reference genes

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