Gene: AT5G20220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G20220
  • Transcript Identifier AT5G20220.1
  • Gene Type Coding gene
  • Location Chr5 : 6822208-6825771 : positive

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid AT5G20220.1
  • uniprot F4K466

Descriptions

  • Description zinc knuckle (CCHC-type) family protein
  • Computational description zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000767
IBA
Gene Ontologypositive regulation of cytoplasmic translation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003729
IBA
Gene OntologymRNA binding1
GO:0045182
IBA
Gene Ontologytranslation regulator activity1
GO:0003727
IBA
Gene Ontologysingle-stranded RNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036875 Zinc finger, CCHC-type superfamily
IPR001878 Zinc finger, CCHC-type
Mapman id Description
35.1 not assigned.annotated