Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 0.0e+00 1232.6 647 100.0
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 8.6e-274 946.8 650 78.9
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.1e-265 919.8 650 77.4
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 4.7e-264 914.4 650 77.1
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 1.1e-263 913.3 650 76.9
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.3e-197 693.7 622 65.6
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 4.0e-178 629.0 653 55.0
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 1.1e-175 620.9 653 55.6
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 1.0e-173 614.4 656 56.2
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 3.4e-169 599.4 652 55.1
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 4.1e-167 592.4 675 54.8
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 6.8e-162 575.1 653 52.7
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 5.2e-154 548.9 707 47.5
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 1.5e-153 547.4 706 48.3
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 8.3e-152 541.6 654 52.8
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 7.1e-151 538.5 668 49.7
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 1.0e-149 534.6 635 51.3
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 2.5e-148 530.0 707 48.7
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 4.3e-148 529.3 705 46.4
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 4.3e-148 529.3 706 46.3
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 2.8e-147 526.6 664 49.8
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 4.0e-146 522.7 704 46.4
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 1.9e-143 513.8 707 46.1
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.2e-142 511.1 706 45.3
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 4.3e-140 502.7 663 48.6
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 2.9e-136 490.0 657 48.7
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 3.2e-135 486.5 652 47.5
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 5.4e-135 485.7 705 45.0
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 9.3e-135 485.0 706 44.9
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.5e-132 477.6 643 48.2
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 7.3e-132 475.3 647 45.7
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 1.1e-130 471.5 575 51.5
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 5.8e-129 465.7 685 45.1
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 9.9e-129 464.9 700 43.4
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 1.8e-125 454.1 714 43.7
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 3.9e-125 453.0 651 44.5
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 5.6e-124 449.1 653 44.4
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 7.4e-124 448.7 661 43.9
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.4e-122 444.5 651 45.0
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 2.4e-122 443.7 642 44.7
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 5.3e-122 442.6 654 43.9
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 2.0e-121 440.7 588 50.3
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 2.6e-121 440.3 715 42.0
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 3.4e-121 439.9 667 44.5
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.9e-120 436.8 654 44.0
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 6.4e-120 435.6 715 42.1
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 6.4e-120 435.6 651 44.4
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 2.5e-119 433.7 657 43.5
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 5.5e-119 432.6 666 43.5
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 1.2e-118 431.4 633 46.3
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 8.2e-115 418.7 697 39.5
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 1.4e-114 417.9 635 43.6
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.4e-114 417.9 643 41.1
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 1.7e-112 411.0 659 41.9
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 6.1e-110 402.5 699 41.9
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 7.9e-110 402.1 655 42.6
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 5.7e-108 396.0 512 47.7
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 6.3e-107 392.5 655 42.0
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 6.9e-106 389.0 473 52.4
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 2.2e-104 384.0 672 40.0
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 2.2e-104 384.0 630 42.9
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.2e-102 378.3 655 41.5
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 2.7e-102 377.1 630 42.9
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 1.0e-101 375.2 641 40.7
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 8.8e-101 372.1 712 37.6
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 6.3e-99 365.9 639 40.5
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.0e-97 360.9 605 38.3
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 6.5e-96 355.9 579 42.3
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 3.9e-93 346.7 632 40.5
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 4.4e-92 343.2 670 39.4
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 1.7e-91 341.3 656 38.3
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 2.0e-89 334.3 638 38.7
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 5.9e-89 332.8 477 47.6
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 1.0e-88 332.0 693 36.4
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 1.7e-88 331.3 532 42.5
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 5.0e-88 329.7 650 36.3
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 1.9e-87 327.8 664 37.5
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 2.5e-87 327.4 630 38.1
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 2.7e-86 323.9 309 56.6
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.6e-86 323.6 690 37.1
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.9e-85 320.1 541 41.2
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.0e-80 305.4 385 47.5
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 3.8e-80 303.5 647 36.8
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 3.8e-80 303.5 647 36.8
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 5.0e-80 303.1 629 37.0
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 1.1e-79 302.0 629 36.9
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 2.1e-78 297.7 635 36.7
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 8.0e-78 295.8 370 52.4
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 5.7e-76 289.7 323 49.8
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 1.6e-73 281.6 707 33.4
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 3.8e-72 276.9 667 34.2
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 6.5e-72 276.2 260 56.5
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 3.6e-70 270.4 673 34.0
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.8e-69 268.1 308 47.7
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 1.8e-69 268.1 691 32.3
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 1.7e-67 261.5 647 34.8
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 8.3e-67 259.2 412 42.5
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 4.1e-66 256.9 412 41.7
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 3.5e-65 253.8 662 33.1
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 1.8e-61 241.5 670 31.8
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 5.2e-61 240.0 236 57.2
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 2.4e-58 231.1 439 39.2
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 3.5e-57 227.3 192 59.4
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 3.9e-56 223.8 438 40.4
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 7.3e-55 219.5 696 32.0
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.6e-52 211.1 305 42.0
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 2.2e-51 208.0 390 40.0
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 1.1e-47 195.7 307 44.6
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 2.3e-45 188.0 511 34.8
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 6.8e-45 186.4 321 41.7
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 3.4e-44 184.1 372 38.4
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 5.4e-42 176.8 200 50.0
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 1.6e-38 165.2 128 63.3
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 3.6e-38 164.1 213 49.3
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.2e-35 154.8 135 56.3
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 2.9e-35 154.5 218 47.2
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 2.5e-31 141.4 716 26.3
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 5.8e-28 130.2 297 36.7
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 6.0e-25 120.2 213 39.4
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 5.6e-23 113.6 338 29.6
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 1.3e-22 112.5 129 47.3
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 3.1e-21 107.8 192 42.2
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 9.9e-20 102.8 98 53.1
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 3.5e-17 94.4 324 30.2
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 5.6e-15 87.0 175 39.4
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.0e-08 66.2 78 41.0


User provided reference genes

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