Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI73G0983 Tripterygium wilfordii HOM05D004725 ORTHO05D005683 3.6e-48 194.5 94 100.0
TWI09G0594 Tripterygium wilfordii HOM05D004725 ORTHO05D005683 3.2e-20 101.7 65 80.0
Eucgr.D00314 Eucalyptus grandis HOM05D004725 ORTHO05D005683 5.1e-18 94.4 66 71.2
GSVIVG01034912001 Vitis vinifera HOM05D004725 ORTHO05D005683 2.5e-17 92.0 64 73.4
CANSAT35G1772 Cannabis sativa HOM05D004725 ORTHO05D005683 7.4e-17 90.5 66 68.2
Cpa.g.sc9.42 Carica papaya HOM05D004725 ORTHO05D005683 3.7e-16 88.2 66 68.2
GSVIVG01034975001 Vitis vinifera HOM05D004725 ORTHO05D005683 3.7e-16 88.2 66 71.2
Atru.chr4.3042 Acer truncatum HOM05D004725 ORTHO05D005683 4.8e-16 87.8 66 65.2
Nn3g21748 Nelumbo nucifera HOM05D004725 ORTHO05D005683 1.8e-15 85.9 66 65.2
MSTRG.3853 Avicennia marina HOM05D004725 ORTHO05D005683 4.1e-15 84.7 66 63.6
Prupe.1G115500 Prunus persica HOM05D004725 ORTHO05D005683 4.1e-15 84.7 66 65.2
Nitab4.5_0000160g0190 Nicotiana tabacum HOM05D004725 ORTHO05D005683 6.9e-15 84.0 66 63.6
COL.COLO4_34597 Corchorus olitorius HOM05D004725 ORTHO05D005683 1.5e-14 82.8 66 65.2
MD13G1151200 Malus domestica HOM05D004725 ORTHO05D005683 1.5e-14 82.8 66 65.2
Ciclev10005849m.g Citrus clementina HOM05D004725 ORTHO05D005683 2.0e-14 82.4 66 62.1
CAN.G598.3 Capsicum annuum HOM05D004725 ORTHO05D005683 3.4e-14 81.6 66 62.1
Dinv15152 Davidia involucrata HOM05D004725 ORTHO05D005683 3.4e-14 81.6 66 63.6
Migut.G00073 Erythranthe guttata HOM05D004725 ORTHO05D005683 3.4e-14 81.6 66 60.6
QL06p012630 Quercus lobata HOM05D004725 ORTHO05D005683 3.4e-14 81.6 66 60.6
Oeu038772.1 Olea europaea HOM05D004725 ORTHO05D005683 4.5e-14 81.3 66 62.1
CSS0037380 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 5.9e-14 80.9 66 63.6
Haze_01314 Corylus avellana HOM05D004725 ORTHO05D005683 5.9e-14 80.9 66 60.6
Manes.03G206000 Manihot esculenta HOM05D004725 ORTHO05D005683 5.9e-14 80.9 66 63.6
Nitab4.5_0002789g0040 Nicotiana tabacum HOM05D004725 ORTHO05D005683 5.9e-14 80.9 66 62.1
THA.LOC104827096 Tarenaya hassleriana HOM05D004725 ORTHO05D005683 5.9e-14 80.9 66 62.1
Potri.008G103800 Populus trichocarpa HOM05D004725 ORTHO05D005683 7.7e-14 80.5 66 62.1
Oeu001165.1 Olea europaea HOM05D004725 ORTHO05D005683 1.0e-13 80.1 73 57.5
TAR376G0735 Trochodendron aralioides HOM05D004725 ORTHO05D005683 1.0e-13 80.1 66 63.6
CSS0006068 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 1.3e-13 79.7 64 67.2
Carub.0008s0882 Capsella rubella HOM05D004725 ORTHO05D005683 1.3e-13 79.7 66 60.6
Gohir.A10G173400 Gossypium hirsutum HOM05D004725 ORTHO05D005683 1.3e-13 79.7 66 63.6
Gohir.D10G179900 Gossypium hirsutum HOM05D004725 ORTHO05D005683 1.3e-13 79.7 66 63.6
Gorai.011G201500 Gossypium raimondii HOM05D004725 ORTHO05D005683 1.3e-13 79.7 66 63.6
MD16G1152100 Malus domestica HOM05D004725 ORTHO05D005683 1.3e-13 79.7 51 78.4
Peaxi162Scf00057g02232 Petunia axillaris HOM05D004725 ORTHO05D005683 1.3e-13 79.7 66 62.1
Sabra08G0078400 Salix brachista HOM05D004725 ORTHO05D005683 1.3e-13 79.7 66 60.6
Carub.0008s0897 Capsella rubella HOM05D004725 ORTHO05D005683 1.7e-13 79.3 66 60.6
Cc00_g03440 Coffea canephora HOM05D004725 ORTHO05D005683 1.7e-13 79.3 66 63.6
Lsat_1_v5_gn_8_139661 Lactuca sativa HOM05D004725 ORTHO05D005683 1.7e-13 79.3 66 62.1
unitig_37.g12782 Utricularia gibba HOM05D004725 ORTHO05D005683 2.2e-13 79.0 66 62.1
Actinidia31555 Actinidia chinensis HOM05D004725 ORTHO05D005683 2.9e-13 78.6 66 59.1
CiPaw.02G073900 Carya illinoinensis HOM05D004725 ORTHO05D005683 2.9e-13 78.6 66 59.1
Os05g0143400 Oryza sativa ssp. japonica HOM05D004725 ORTHO05D005683 2.9e-13 78.6 66 60.6
SHI00123 Sapria himalayana HOM05D004725 ORTHO05D005683 2.9e-13 78.6 66 59.1
Solyc11g065900.2 Solanum lycopersicum HOM05D004725 ORTHO05D005683 2.9e-13 78.6 66 60.6
Sopen11g025640 Solanum pennellii HOM05D004725 ORTHO05D005683 2.9e-13 78.6 66 60.6
PGSC0003DMG400007347 Solanum tuberosum HOM05D004725 ORTHO05D005683 2.9e-13 78.6 66 60.6
VMungo0331G0107 Vigna mungo HOM05D004725 ORTHO05D005683 2.9e-13 78.6 66 60.6
CSS0018454 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 3.8e-13 78.2 70 58.6
CARHR056790 Cardamine hirsuta HOM05D004725 ORTHO05D005683 3.8e-13 78.2 66 59.1
COL.COLO4_09634 Corchorus olitorius HOM05D004725 ORTHO05D005683 3.8e-13 78.2 66 62.1
RcHm_v2.0_Chr4g0425721 Rosa chinensis HOM05D004725 ORTHO05D005683 3.8e-13 78.2 66 60.6
AL8G22360 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 5.0e-13 77.8 66 59.1
BcaC06g30731 Brassica carinata HOM05D004725 ORTHO05D005683 5.0e-13 77.8 66 57.6
FAN07G1636 Fragaria x ananassa HOM05D004725 ORTHO05D005683 5.0e-13 77.8 66 60.6
FAN22G2356 Fragaria x ananassa HOM05D004725 ORTHO05D005683 5.0e-13 77.8 66 60.6
Lj3A833G37 Lonicera japonica HOM05D004725 ORTHO05D005683 5.0e-13 77.8 66 63.6
arahy.Tifrunner.gnm1.ann1.ASV3U0 Arachis hypogaea HOM05D004725 ORTHO05D005683 6.5e-13 77.4 63 63.5
FvH4_4g13700 Fragaria vesca HOM05D004725 ORTHO05D005683 6.5e-13 77.4 66 59.1
FAN07G0549 Fragaria x ananassa HOM05D004725 ORTHO05D005683 6.5e-13 77.4 66 59.1
SalBow8G1743 Salvia bowleyana HOM05D004725 ORTHO05D005683 6.5e-13 77.4 66 60.6
DCAR_030461 Daucus carota HOM05D004725 ORTHO05D005683 8.5e-13 77.0 66 57.6
Sp2g19380 Schrenkiella parvula HOM05D004725 ORTHO05D005683 8.5e-13 77.0 66 57.6
Dinv44275 Davidia involucrata HOM05D004725 ORTHO05D005683 1.1e-12 76.6 64 62.5
Thhalv10004892m.g Eutrema salsugineum HOM05D004725 ORTHO05D005683 1.1e-12 76.6 66 57.6
Duzib212G0103 Durio zibethinus HOM05D004725 ORTHO05D005683 1.4e-12 76.3 66 60.6
HanXRQChr10g0291591 Helianthus annuus HOM05D004725 ORTHO05D005683 1.4e-12 76.3 66 60.6
HanXRQChr17g0554971 Helianthus annuus HOM05D004725 ORTHO05D005683 1.4e-12 76.3 66 60.6
SGA_v2.0_scaffold157G37322 Striga asiatica HOM05D004725 ORTHO05D005683 1.4e-12 76.3 66 56.1
Aqoxy6G02121 Aquilegia oxysepala HOM05D004725 ORTHO05D005683 1.9e-12 75.9 66 62.1
AL8G22680 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 1.9e-12 75.9 66 57.6
arahy.Tifrunner.gnm1.ann1.NMZ4WG Arachis hypogaea HOM05D004725 ORTHO05D005683 1.9e-12 75.9 63 61.9
BcaC06g30733 Brassica carinata HOM05D004725 ORTHO05D005683 1.9e-12 75.9 66 57.6
A06p38630 Brassica napus HOM05D004725 ORTHO05D005683 1.9e-12 75.9 66 57.6
C07p39630 Brassica napus HOM05D004725 ORTHO05D005683 1.9e-12 75.9 66 57.6
BolC7t44486H Brassica oleracea HOM05D004725 ORTHO05D005683 1.9e-12 75.9 66 57.6
BraA06t26778Z Brassica rapa HOM05D004725 ORTHO05D005683 1.9e-12 75.9 66 57.6
ClCG05G001400 Citrullus lanatus HOM05D004725 ORTHO05D005683 1.9e-12 75.9 63 60.3
Lalb_Chr20g0110441 Lupinus albus HOM05D004725 ORTHO05D005683 1.9e-12 75.9 66 59.1
Thecc.04G302700 Theobroma cacao HOM05D004725 ORTHO05D005683 1.9e-12 75.9 66 62.1
Aa31LG11G8130 Aethionema arabicum HOM05D004725 ORTHO05D005683 2.5e-12 75.5 66 57.6
Phvul.010G140100 Phaseolus vulgaris HOM05D004725 ORTHO05D005683 3.2e-12 75.1 66 57.6
Ca_09654_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 5.5e-12 74.3 66 57.6
Glyma.08G194400 Glycine max HOM05D004725 ORTHO05D005683 5.5e-12 74.3 66 56.1
Lalb_Chr20g0115601 Lupinus albus HOM05D004725 ORTHO05D005683 5.5e-12 74.3 64 59.4
PGR031G0191 Punica granatum HOM05D004725 ORTHO05D005683 5.5e-12 74.3 67 58.2
AT5G49010 Arabidopsis thaliana HOM05D004725 ORTHO05D005683 7.2e-12 73.9 66 56.1
Ca_02282_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 9.4e-12 73.6 66 56.1
MELO3C006096.2 Cucumis melo HOM05D004725 ORTHO05D005683 1.2e-11 73.2 64 56.2
CsaV3_3G008790 Cucumis sativus L. HOM05D004725 ORTHO05D005683 1.2e-11 73.2 63 57.1
Psat1g138600 Pisum sativum HOM05D004725 ORTHO05D005683 1.2e-11 73.2 66 57.6
Zm00001eb108600 Zea mays HOM05D004725 ORTHO05D005683 1.6e-11 72.8 66 54.5
CARHR182700 Cardamine hirsuta HOM05D004725 ORTHO05D005683 4.6e-11 71.2 66 53.0
CDE02G0725 Ceratophyllum demersum HOM05D004725 ORTHO05D005683 4.6e-11 71.2 67 61.2
Lj3g0003769 Lotus japonicus HOM05D004725 ORTHO05D005683 4.6e-11 71.2 66 54.5
vmacro08028 Vaccinium macrocarpon HOM05D004725 ORTHO05D005683 4.6e-11 71.2 64 59.4
Sed0009995 Sechium edule HOM05D004725 ORTHO05D005683 6.1e-11 70.9 65 53.8
TPR.G27119 Trifolium pratense HOM05D004725 ORTHO05D005683 7.9e-11 70.5 66 56.1
Glyma.07G011200 Glycine max HOM05D004725 ORTHO05D005683 1.8e-10 69.3 65 52.3
Medtr2g044210 Medicago truncatula HOM05D004725 ORTHO05D005683 1.8e-10 69.3 66 56.1
PSO384G4206 Papaver somniferum HOM05D004725 ORTHO05D005683 2.3e-10 68.9 53 66.0
ECA236G4776 Erigeron canadensis HOM05D004725 ORTHO05D005683 3.0e-10 68.6 66 56.1
Rhsim04G0240300 Rhododendron simsii HOM05D004725 ORTHO05D005683 5.1e-10 67.8 64 56.2
FAN12G0673 Fragaria x ananassa HOM05D004725 ORTHO05D005683 6.7e-10 67.4 66 57.6
MBI18_g03518_MAGBIO Magnolia biondii HOM05D004725 ORTHO05D005683 1.5e-09 66.2 66 59.1
Sc25g0003230 Simmondsia chinensis HOM05D004725 ORTHO05D005683 2.0e-09 65.9 66 57.6
Ah.13g071340 Amaranthus hybridus HOM05D004725 ORTHO05D005683 2.5e-09 65.5 66 51.5
HPP92_027744 Vanilla planifolia HOM05D004725 ORTHO05D005683 3.3e-09 65.1 66 56.1
ATR0691G022 Amborella trichopoda HOM05D004725 ORTHO05D005683 5.7e-09 64.3 66 57.6
PSO782G1146 Papaver somniferum HOM05D004725 ORTHO05D005683 5.7e-09 64.3 53 62.3
Rhsim05G0134600 Rhododendron simsii HOM05D004725 ORTHO05D005683 7.4e-09 63.9 61 55.7
SEGI_00745 Sequoiadendron giganteum HOM05D004725 ORTHO05D005683 7.4e-09 63.9 66 51.5
PSO063G5877 Papaver somniferum HOM05D004725 ORTHO05D005683 1.7e-08 62.8 53 60.4
SMO351G0117 Selaginella moellendorffii HOM05D004725 ORTHO05D005683 4.8e-08 61.2 66 48.5
SalBow6G0528 Salvia bowleyana HOM05D004725 ORTHO05D005683 6.3e-08 60.8 47 63.8
FvH4_4g20000 Fragaria vesca HOM05D004725 ORTHO05D005683 2.4e-07 58.9 42 69.0
Actinidia18458 Actinidia chinensis HOM05D004725 ORTHO05D005683 1.2e-06 56.6 43 65.1
RcHm_v2.0_Chr6g0255221 Rosa chinensis HOM05D004725 ORTHO05D005683 1.2e-06 56.6 43 62.8
Pp3c12_20580 Physcomitrium patens HOM05D004725 ORTHO05D005683 1.5e-06 56.2 66 45.5
EL10Ac3g05524 Beta vulgaris HOM05D004725 ORTHO05D005683 2.0e-06 55.8 75 44.0
Mapoly0029s0136 Marchantia polymorpha HOM05D004725 ORTHO05D005683 2.6e-06 55.5 66 43.9
RcHm_v2.0_Chr7g0210081 Rosa chinensis HOM05D004725 ORTHO05D005683 4.5e-06 54.7 43 58.1
FAN12G0808 Fragaria x ananassa HOM05D004725 ORTHO05D005683 5.9e-06 54.3 43 62.8


User provided reference genes

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