Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 0.0e+00 1151.3 650 100.0
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.0e-290 1003.0 651 81.9
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 7.8e-166 588.2 653 52.7
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 1.2e-163 580.9 653 54.5
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 1.9e-159 567.0 655 55.0
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 2.4e-154 550.1 655 50.1
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 4.4e-153 545.8 654 51.1
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 2.9e-152 543.1 655 49.8
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 7.1e-151 538.5 651 49.9
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 4.6e-150 535.8 705 49.9
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 2.3e-149 533.5 655 49.2
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 5.1e-149 532.3 655 49.0
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 3.5e-142 509.6 643 52.6
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 3.3e-140 503.1 706 45.2
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 1.4e-138 497.7 705 44.4
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 8.4e-136 488.4 704 44.3
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 1.6e-134 484.2 705 43.8
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 2.1e-134 483.8 705 42.8
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 3.7e-131 473.0 654 49.2
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.7e-131 473.0 684 45.8
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 8.2e-131 471.9 707 43.8
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 1.8e-130 470.7 643 47.0
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.4e-130 470.3 706 43.8
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 5.8e-129 465.7 687 45.3
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 6.1e-126 455.7 635 45.0
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 3.9e-125 453.0 635 45.7
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 8.2e-123 445.3 632 44.8
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.4e-122 444.5 590 51.0
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.4e-122 444.5 649 43.9
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 9.0e-122 441.8 634 47.8
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 1.5e-121 441.0 640 45.5
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.9e-119 434.1 666 43.2
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.4e-117 427.9 676 42.5
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 1.8e-117 427.6 575 51.5
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 2.0e-116 424.1 655 42.6
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 2.5e-116 423.7 706 41.9
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 5.7e-116 422.5 664 42.2
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 7.4e-116 422.2 652 42.8
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 2.8e-115 420.2 716 45.1
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 1.1e-114 418.3 658 43.5
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 1.4e-114 417.9 685 40.6
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 1.8e-114 417.5 694 45.2
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 3.1e-114 416.8 714 41.6
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 2.6e-113 413.7 688 41.3
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.0e-112 411.8 646 46.9
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 1.4e-111 407.9 640 41.1
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-110 404.4 656 42.8
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 3.9e-109 399.8 695 39.1
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 3.9e-109 399.8 655 40.9
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.9e-104 383.6 615 42.0
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 3.6e-102 376.7 659 39.3
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 8.0e-102 375.6 641 39.5
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 1.1e-100 371.7 656 42.5
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 4.8e-99 366.3 648 45.1
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 8.2e-99 365.5 653 38.9
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 2.4e-98 364.0 551 42.1
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 7.0e-98 362.5 635 39.8
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 9.1e-98 362.1 656 42.1
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 3.8e-96 356.7 646 39.3
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 5.0e-96 356.3 656 39.0
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 2.1e-94 350.9 643 39.3
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 4.7e-94 349.7 643 39.2
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 8.0e-94 349.0 652 40.6
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 8.8e-93 345.5 418 48.1
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 1.1e-90 338.6 705 37.6
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 2.7e-89 334.0 540 46.7
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 5.9e-89 332.8 635 40.9
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.3e-88 331.6 308 56.8
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 9.4e-87 325.5 598 37.0
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.6e-86 323.6 581 41.8
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 4.7e-86 323.2 669 43.2
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 2.0e-84 317.8 650 34.6
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 7.5e-84 315.8 638 37.1
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 9.8e-84 315.5 471 44.8
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.1e-82 312.0 685 41.2
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 4.1e-82 310.1 645 35.2
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.2e-81 308.5 660 37.3
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 1.3e-80 305.1 668 35.3
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 1.7e-80 304.7 666 36.0
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.0e-78 295.8 422 44.3
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 4.0e-77 293.5 659 39.6
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 4.0e-77 293.5 659 39.6
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 2.0e-76 291.2 645 35.7
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 4.4e-76 290.0 645 35.5
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 9.8e-76 288.9 642 39.7
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 2.9e-75 287.3 716 32.5
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 1.4e-74 285.0 693 32.9
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 7.8e-73 279.3 478 42.1
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 5.8e-68 263.1 665 34.7
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 9.8e-68 262.3 713 31.6
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 2.2e-67 261.2 693 32.6
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 2.9e-67 260.8 316 46.2
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.9e-66 258.1 254 53.9
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 3.2e-66 257.3 656 33.7
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 4.1e-66 256.9 437 41.4
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 2.3e-64 251.1 321 43.9
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 3.9e-64 250.4 678 33.5
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 1.1e-63 248.8 666 32.6
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 5.6e-63 246.5 664 32.4
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 6.2e-62 243.0 247 53.0
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 5.2e-61 240.0 369 44.7
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 6.8e-61 239.6 655 32.2
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 7.1e-58 229.6 675 32.3
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 8.6e-56 222.6 236 52.1
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.5e-55 221.9 644 31.5
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 6.2e-54 216.5 306 45.4
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 2.5e-47 194.5 305 43.3
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.4e-45 188.0 200 50.5
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 1.1e-42 179.1 128 68.0
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.1e-41 174.9 428 34.6
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 3.5e-41 174.1 444 34.9
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 3.9e-40 170.6 368 39.7
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.5e-39 167.9 134 62.7
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 2.5e-31 141.4 186 46.2
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 5.6e-31 140.2 373 33.5
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 2.0e-28 131.7 710 25.9
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 1.3e-24 119.0 343 33.5
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 5.1e-24 117.1 182 46.2
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 8.7e-24 116.3 300 33.0
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 7.4e-23 113.2 82 63.4
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 1.1e-21 109.4 176 44.9
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 1.0e-19 102.8 97 51.5
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 1.0e-19 102.8 441 27.9
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 4.9e-19 100.5 164 40.2
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 1.6e-14 85.5 153 39.9
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 6.1e-09 67.0 82 40.2
CBR_g41780 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-07 61.6 55 56.4
HPP92_006144 Vanilla planifolia HOM05D002569 ORTHO05D006728 2.5e-07 61.6 171 31.0


User provided reference genes

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