Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 3.4e-152 541.6 263 100.0
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.0e-116 423.7 251 82.9
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 1.3e-116 423.3 253 81.0
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 5.1e-116 421.4 252 81.0
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 8.7e-116 420.6 250 80.8
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 2.5e-115 419.1 250 80.0
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 4.3e-115 418.3 260 78.1
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.3e-114 416.8 239 85.8
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 1.6e-114 416.4 253 79.4
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 3.7e-114 415.2 250 80.8
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 6.3e-114 414.5 242 83.1
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 8.2e-114 414.1 247 79.8
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 8.2e-114 414.1 254 78.0
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.1e-113 413.7 250 79.2
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.8e-113 412.9 243 84.0
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 3.1e-113 412.1 258 79.1
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 6.9e-113 411.0 249 79.9
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 9.0e-113 410.6 257 76.3
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 1.5e-112 409.8 249 79.9
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 5.9e-112 407.9 249 79.9
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.3e-111 406.8 253 76.7
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.3e-111 406.8 252 78.2
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 2.9e-111 405.6 245 79.6
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 3.8e-111 405.2 245 79.2
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.1e-110 403.7 237 83.1
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 7.2e-110 401.0 262 75.6
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.2e-109 400.2 270 75.9
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 3.6e-109 398.7 245 77.1
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 4.6e-109 398.3 249 78.7
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.6e-109 398.3 245 81.2
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.0e-108 397.1 250 76.8
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.3e-108 396.7 256 78.1
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 3.0e-108 395.6 258 75.6
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.0e-108 395.6 258 75.6
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 3.0e-108 395.6 229 83.0
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.9e-108 395.2 260 75.0
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 3.9e-108 395.2 248 79.0
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 1.5e-107 393.3 232 82.8
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 2.5e-107 392.5 258 74.4
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 2.5e-107 392.5 255 75.3
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 4.3e-107 391.7 257 73.5
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 4.3e-107 391.7 257 75.5
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.3e-107 391.7 271 73.8
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 4.3e-107 391.7 250 74.4
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 7.4e-107 391.0 222 86.9
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 2.8e-106 389.0 247 79.8
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 3.7e-106 388.7 257 75.5
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 3.7e-106 388.7 259 75.7
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 3.7e-106 388.7 267 72.7
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 3.1e-105 385.6 239 78.2
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 4.1e-105 385.2 247 75.3
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 6.9e-105 384.4 251 75.3
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.5e-104 383.3 247 76.1
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.5e-104 383.3 268 70.9
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 2.0e-104 382.9 256 73.4
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 2.0e-104 382.9 250 75.2
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 2.0e-104 382.9 233 78.5
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 4.5e-104 381.7 255 74.5
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 5.9e-104 381.3 247 74.5
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.0e-103 380.6 240 77.1
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.3e-103 380.2 247 74.5
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 5.0e-103 378.3 255 72.9
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 1.1e-102 377.1 255 73.3
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.1e-102 377.1 244 75.8
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.9e-102 376.3 257 72.4
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 1.9e-102 376.3 249 73.9
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 2.5e-102 375.9 257 72.4
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 2.5e-102 375.9 255 72.5
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 3.2e-102 375.6 259 72.2
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 7.2e-102 374.4 255 72.5
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 1.6e-101 373.2 258 70.9
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 1.6e-101 373.2 258 70.9
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 2.7e-101 372.5 250 75.6
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.6e-101 372.1 253 72.3
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 6.1e-101 371.3 259 70.7
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.0e-100 370.5 241 76.3
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.4e-100 370.2 245 75.1
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 3.9e-100 368.6 254 71.7
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 8.8e-100 367.5 245 74.7
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 5.3e-97 358.2 208 83.2
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 6.9e-97 357.8 239 73.6
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 3.4e-96 355.5 239 72.4
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 4.5e-96 355.1 229 72.1
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 2.2e-95 352.8 230 74.8
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.9e-95 352.4 253 66.8
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 3.8e-95 352.1 308 60.1
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 8.5e-95 350.9 209 80.9
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 8.5e-95 350.9 213 78.9
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 2.5e-94 349.4 240 74.2
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 3.2e-94 349.0 230 73.0
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 2.1e-93 346.3 270 65.2
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 3.6e-93 345.5 330 57.3
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 6.1e-93 344.7 269 65.4
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.1e-91 340.5 215 78.6
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 7.4e-91 337.8 218 75.2
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.3e-90 337.0 210 77.1
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 8.2e-90 334.3 208 76.9
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 1.4e-89 333.6 211 78.2
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 7.0e-89 331.3 202 80.2
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.5e-86 322.8 199 80.9
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 2.2e-82 309.7 335 52.5
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 6.5e-79 298.1 197 72.6
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 7.5e-75 284.6 174 80.5
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.4e-73 279.6 224 62.9
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 7.7e-72 274.6 167 81.4
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 4.0e-68 262.3 228 55.3
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 3.5e-64 249.2 247 50.6
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 1.0e-63 247.7 150 78.0
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 2.8e-61 239.6 229 52.4
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.0e-55 221.1 133 79.7
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 4.7e-53 212.2 227 48.9
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 5.4e-49 198.7 146 69.9
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 7.0e-49 198.4 146 69.9
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 2.7e-48 196.4 146 69.2
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.3e-47 194.1 137 70.1
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 9.5e-46 188.0 175 58.3
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 9.5e-46 188.0 114 78.9
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.1e-45 186.8 113 72.6
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 3.5e-40 169.5 123 69.1
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 5.6e-38 162.2 96 82.3
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 4.9e-34 149.1 95 77.9
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.2e-32 144.4 79 84.8
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.8e-28 130.6 118 54.2
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.7e-24 116.7 110 59.1
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 3.4e-19 99.8 47 91.5
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.4e-12 77.8 114 44.7
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.4e-12 77.8 168 28.6
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.2e-11 74.7 114 43.9
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 5.6e-06 55.8 37 67.6


User provided reference genes

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