Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 0.0e+00 1093.6 546 100.0
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 1.7e-185 653.3 538 61.5
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 6.5e-182 641.3 558 60.6
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 2.9e-174 615.9 546 59.0
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 3.6e-172 609.0 537 59.6
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 2.0e-167 593.2 537 58.3
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 5.2e-155 552.0 540 53.3
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 2.6e-154 549.7 541 53.2
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 4.4e-154 548.9 529 55.8
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 1.9e-152 543.5 538 54.3
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 2.4e-152 543.1 538 54.3
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 3.2e-152 542.7 543 53.8
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 3.5e-151 539.3 538 54.1
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 4.0e-147 525.8 538 52.0
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 3.4e-146 522.7 538 51.5
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 7.5e-146 521.5 544 51.7
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 2.9e-145 519.6 530 53.8
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 4.1e-144 515.8 541 51.6
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 7.1e-144 515.0 542 50.9
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 5.1e-142 508.8 482 54.1
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.2e-140 504.2 544 50.4
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 8.1e-140 501.5 544 50.4
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 4.0e-139 499.2 523 49.9
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 1.3e-137 494.2 545 49.0
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 2.9e-137 493.0 511 50.5
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 8.4e-137 491.5 556 49.5
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 1.4e-136 490.7 541 50.1
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 9.2e-136 488.0 589 48.6
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.1e-135 486.9 544 48.9
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 3.5e-135 486.1 511 50.3
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 1.0e-134 484.6 541 48.4
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 2.3e-134 483.4 536 49.3
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 1.1e-133 481.1 526 50.0
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 3.3e-133 479.6 581 47.2
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 9.6e-133 478.0 523 49.7
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 4.7e-132 475.7 492 53.3
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 1.1e-131 474.6 554 46.8
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 1.1e-131 474.6 511 49.1
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 1.1e-131 474.6 540 48.7
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 4.0e-131 472.6 526 48.7
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 9.0e-131 471.5 541 47.7
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 1.2e-130 471.1 423 56.7
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 3.4e-130 469.5 544 48.7
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 4.4e-130 469.2 544 48.5
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 4.9e-129 465.7 526 47.5
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 3.2e-128 463.0 542 48.0
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 2.7e-127 459.9 525 48.8
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 2.7e-127 459.9 538 48.3
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 3.5e-127 459.5 542 47.8
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 3.5e-127 459.5 542 47.8
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 4.6e-127 459.1 531 48.6
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 5.1e-126 455.7 539 47.7
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 5.1e-126 455.7 600 45.2
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 3.3e-125 453.0 545 47.2
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 6.9e-123 445.3 448 50.2
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 1.2e-122 444.5 529 45.2
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 5.8e-122 442.2 545 46.1
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 9.9e-122 441.4 475 50.5
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 1.3e-121 441.0 487 49.1
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.9e-121 439.9 498 49.4
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 8.4e-121 438.3 390 58.7
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.1e-120 438.0 534 44.8
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.1e-120 438.0 534 45.5
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 5.4e-120 435.6 611 41.7
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 5.4e-120 435.6 425 55.3
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 6.0e-119 432.2 433 52.2
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 1.1e-117 427.9 474 50.2
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 1.1e-115 421.4 388 54.6
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.4e-115 421.0 570 44.0
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 7.1e-112 408.7 433 51.0
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 2.3e-110 403.7 562 44.5
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 3.0e-110 403.3 697 36.6
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 5.8e-106 389.0 476 45.4
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 4.9e-105 386.0 477 44.9
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 4.9e-105 386.0 538 41.8
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 1.6e-103 380.9 386 54.9
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 6.0e-103 379.0 386 50.8
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 1.1e-101 374.8 357 53.5
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 4.3e-101 372.9 561 42.2
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 2.2e-100 370.5 411 49.4
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 2.8e-100 370.2 554 38.3
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.4e-99 367.1 430 48.1
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.1e-99 366.7 422 45.5
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 2.6e-98 363.6 531 42.7
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 3.2e-96 356.7 374 51.9
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.2e-95 354.8 391 49.1
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 2.7e-95 353.6 428 45.3
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 3.3e-93 346.7 393 46.1
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 2.4e-91 340.5 373 49.1
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 5.3e-91 339.3 393 46.8
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.4e-88 331.3 440 43.2
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.4e-88 331.3 408 46.3
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.5e-74 283.5 279 51.3
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.7e-73 281.2 227 66.1
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.8e-62 244.6 329 41.0
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 1.6e-55 221.5 561 30.7
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 5.7e-53 213.0 351 36.5
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 2.8e-52 210.7 232 50.0
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 2.5e-48 197.6 539 29.7
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 6.6e-41 172.9 231 44.2
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 1.9e-40 171.4 307 37.5
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 2.6e-29 134.4 209 36.4
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 2.2e-28 131.3 378 28.3
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 5.6e-24 116.7 259 30.5
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 4.0e-22 110.5 213 31.9
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 4.4e-21 107.1 184 36.4
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 3.8e-20 104.0 150 44.7
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 2.4e-19 101.3 115 51.3
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 9.2e-19 99.4 123 50.4
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 3.0e-17 94.4 159 33.3
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 3.1e-14 84.3 90 52.2
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.8e-12 77.4 105 43.8
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.8e-06 58.5 258 27.9


User provided reference genes

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