Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 2.6e-214 748.4 378 100.0
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 3.6e-155 552.0 378 74.1
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 3.9e-149 531.9 378 72.2
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 2.5e-148 529.3 381 71.1
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 1.2e-147 526.9 377 71.4
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 2.1e-147 526.2 386 71.0
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 5.2e-146 521.5 378 70.9
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 5.8e-145 518.1 379 70.4
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 5.8e-145 518.1 379 69.1
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.3e-144 516.9 378 70.6
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 2.9e-144 515.8 378 70.4
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 4.9e-144 515.0 378 69.8
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 1.1e-140 503.8 378 68.8
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 7.3e-140 501.1 378 67.7
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 4.7e-139 498.4 381 67.2
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.1e-138 497.3 379 67.3
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 3.1e-138 495.7 379 67.0
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 5.2e-138 495.0 379 67.0
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 1.1e-135 487.3 378 65.9
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.4e-135 486.9 379 66.0
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 5.4e-135 485.0 378 66.9
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 5.1e-133 478.4 376 66.2
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 3.3e-132 475.7 378 65.6
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 9.6e-132 474.2 378 65.6
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 4.7e-131 471.9 379 65.7
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 8.9e-130 467.6 378 63.0
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 8.9e-130 467.6 379 64.6
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 1.2e-129 467.2 379 64.9
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 4.9e-128 461.8 377 63.7
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 1.4e-127 460.3 378 64.8
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 4.2e-127 458.8 381 63.0
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 1.2e-126 457.2 379 64.1
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 2.1e-126 456.4 378 63.8
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 6.0e-126 454.9 378 61.4
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 7.8e-126 454.5 378 61.6
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 1.7e-125 453.4 382 64.7
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 1.7e-125 453.4 378 63.5
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 2.3e-125 453.0 379 61.7
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 2.3e-125 453.0 377 62.6
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 3.9e-125 452.2 378 63.0
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 6.6e-125 451.4 378 61.4
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.9e-124 449.9 377 62.1
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 4.3e-124 448.7 382 62.0
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 7.3e-124 448.0 378 60.8
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.4e-122 443.7 378 60.6
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 3.1e-122 442.6 379 62.3
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 5.3e-122 441.8 378 62.4
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 1.5e-121 440.3 383 60.1
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 4.5e-121 438.7 342 65.5
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.3e-120 437.2 378 59.8
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 2.4e-119 433.0 378 62.2
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 2.7e-118 429.5 380 59.5
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 7.9e-118 427.9 378 61.4
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 3.9e-117 425.6 382 59.4
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 1.1e-116 424.1 383 58.5
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 3.3e-116 422.5 378 59.0
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 1.6e-115 420.2 382 59.2
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 1.4e-114 417.2 382 59.2
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 2.6e-113 412.9 382 58.4
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 3.4e-113 412.5 382 58.6
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 3.4e-113 412.5 382 58.6
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 5.8e-113 411.8 382 56.8
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 7.6e-113 411.4 378 58.2
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 7.6e-113 411.4 382 58.1
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 9.9e-113 411.0 382 59.4
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 2.2e-112 409.8 386 57.5
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 2.2e-112 409.8 379 58.0
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 2.9e-112 409.5 382 57.6
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 3.8e-112 409.1 383 57.7
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 1.1e-111 407.5 386 57.0
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 1.9e-111 406.8 390 54.1
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 1.9e-111 406.8 386 56.7
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 2.4e-111 406.4 386 56.7
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 3.2e-111 406.0 378 58.2
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 3.2e-111 406.0 378 57.1
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 4.6e-110 402.1 379 59.4
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 6.0e-110 401.7 378 57.4
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 7.9e-110 401.4 383 57.2
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 2.3e-109 399.8 378 57.1
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 1.5e-108 397.1 406 54.2
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 3.3e-108 396.0 380 55.5
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 9.6e-108 394.4 382 57.1
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 5.3e-106 388.7 400 55.5
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 7.6e-105 384.8 400 54.5
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 1.4e-103 380.6 382 52.4
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 4.2e-103 379.0 378 54.2
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 2.1e-102 376.7 328 61.0
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 1.6e-99 367.1 378 53.7
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 3.2e-95 352.8 387 50.1
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 5.5e-95 352.1 385 48.8
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 3.7e-91 339.3 382 50.3
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 5.5e-87 325.5 283 60.1
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 8.2e-83 311.6 264 61.7
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 1.2e-78 297.7 225 68.4
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 3.6e-78 296.2 264 59.8
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 7.9e-78 295.0 318 54.4
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 9.1e-74 281.6 200 70.5
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 4.1e-66 256.1 391 40.4
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 2.0e-65 253.8 395 39.7
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 2.2e-59 233.8 170 70.0
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 2.8e-59 233.4 382 40.1
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 3.5e-57 226.5 166 66.9
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 3.2e-55 219.9 179 63.1
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 1.3e-51 208.0 280 44.3
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 2.2e-51 207.2 168 63.1
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 4.9e-51 206.1 379 38.0
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 6.3e-51 205.7 235 49.4
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 3.5e-49 199.9 169 61.5
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 1.1e-42 178.3 381 33.9
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 2.7e-41 173.7 161 60.2
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 2.2e-35 154.1 160 55.6
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.1e-34 151.8 189 45.0
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.1e-34 149.8 189 45.0
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 2.7e-33 147.1 161 54.7
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 6.6e-32 142.5 159 52.2
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 5.1e-24 116.3 142 49.3
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.4e-18 98.2 170 32.4
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.2e-18 97.1 104 50.0
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.1e-18 95.9 92 55.4
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 3.6e-14 83.6 73 60.3
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.1e-13 82.0 81 51.9
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.4e-10 70.9 83 42.2
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 3.2e-10 70.5 437 22.7
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.1e-10 69.3 77 50.6


User provided reference genes

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