Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 7.4e-157 557.4 324 100.0
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 4.8e-132 474.9 274 89.1
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 3.3e-117 425.6 276 79.0
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.6e-114 416.8 277 76.9
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 2.2e-113 412.9 278 77.3
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 5.0e-113 411.8 272 78.7
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 8.5e-113 411.0 276 77.5
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 8.5e-113 411.0 255 83.1
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 1.5e-112 410.2 280 75.0
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 2.5e-112 409.5 272 78.3
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 3.2e-112 409.1 278 76.3
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 5.5e-112 408.3 278 77.0
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 7.2e-112 407.9 278 77.0
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 7.2e-112 407.9 277 76.9
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 2.7e-111 406.0 259 80.3
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 3.6e-111 405.6 272 76.1
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 3.6e-111 405.6 275 76.0
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 3.6e-111 405.6 276 76.4
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 6.1e-111 404.8 267 78.7
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 8.0e-111 404.4 275 76.4
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 1.0e-110 404.1 271 77.1
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 1.0e-110 404.1 279 76.7
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 1.4e-110 403.7 282 75.2
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.4e-110 403.7 282 75.2
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 1.8e-110 403.3 270 78.1
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 4.0e-110 402.1 282 74.8
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 4.0e-110 402.1 282 74.8
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 6.8e-110 401.4 278 75.5
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 8.8e-110 401.0 274 74.8
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 8.8e-110 401.0 265 78.1
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 8.8e-110 401.0 283 74.9
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 1.5e-109 400.2 276 75.7
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 2.0e-109 399.8 305 70.2
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 2.0e-109 399.8 265 77.7
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 2.6e-109 399.4 271 76.8
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 3.4e-109 399.1 274 74.1
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 3.7e-108 395.6 290 72.4
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 6.3e-108 394.8 277 74.0
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 8.3e-108 394.4 256 80.5
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 5.3e-107 391.7 272 76.5
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 7.0e-107 391.3 257 80.5
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 7.7e-106 387.9 257 78.6
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 7.7e-106 387.9 274 77.0
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 1.0e-105 387.5 281 71.5
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 2.2e-105 386.3 269 74.3
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 2.2e-105 386.3 277 74.4
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 6.5e-105 384.8 274 72.6
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 8.5e-105 384.4 274 75.2
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.5e-104 383.6 270 73.0
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 4.2e-104 382.1 257 75.9
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 1.2e-103 380.6 256 77.7
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 2.7e-103 379.4 272 72.8
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 1.0e-102 377.5 270 73.0
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.4e-102 377.1 271 70.5
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 5.2e-102 375.2 266 74.4
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 5.2e-102 375.2 273 70.7
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 5.2e-102 375.2 315 63.2
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 1.2e-101 374.0 277 71.1
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 2.0e-101 373.2 275 71.6
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 3.4e-101 372.5 282 69.1
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 4.4e-101 372.1 280 71.4
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 5.7e-101 371.7 279 68.8
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 5.7e-101 371.7 280 69.3
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 5.7e-101 371.7 257 75.9
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 9.8e-101 370.9 266 73.3
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 1.3e-100 370.5 273 72.2
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 2.2e-100 369.8 273 70.7
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 2.2e-100 369.8 270 70.4
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 3.7e-100 369.0 283 69.3
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 8.3e-100 367.9 285 69.1
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 2.4e-99 366.3 281 68.7
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 4.1e-99 365.5 285 68.4
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 9.1e-99 364.4 284 68.3
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 9.1e-99 364.4 284 68.3
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 9.1e-99 364.4 278 68.7
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 1.2e-98 364.0 282 68.8
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 1.2e-98 364.0 284 65.8
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 1.2e-98 364.0 284 65.8
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 1.2e-98 364.0 261 72.4
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 1.2e-98 364.0 277 69.0
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 1.6e-98 363.6 286 67.8
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 2.7e-98 362.8 262 70.2
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 3.5e-98 362.5 284 65.5
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 3.5e-98 362.5 284 65.5
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 2.3e-97 359.8 281 68.7
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 2.3e-97 359.8 262 70.2
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 2.5e-96 356.3 275 69.1
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 4.2e-96 355.5 286 67.1
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 5.5e-96 355.1 209 83.7
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 7.2e-96 354.8 244 75.8
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 1.2e-95 354.0 279 68.1
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 1.6e-95 353.6 252 72.2
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 1.6e-95 353.6 308 63.3
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 1.6e-95 353.6 283 68.2
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 1.0e-94 350.9 274 70.1
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.8e-94 350.1 225 77.3
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 4.0e-94 349.0 283 66.1
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 2.0e-93 346.7 277 66.4
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 5.4e-91 338.6 207 78.3
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 7.0e-91 338.2 264 68.6
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 2.0e-90 336.7 277 63.9
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 3.3e-88 329.3 251 68.5
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 1.8e-86 323.6 280 61.8
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.1e-86 322.8 255 66.3
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 4.0e-86 322.4 282 61.0
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 2.4e-83 313.2 255 64.7
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 9.2e-83 311.2 258 59.7
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 6.6e-81 305.1 263 64.3
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 2.8e-79 299.7 231 71.0
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 9.8e-77 291.2 192 75.5
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 3.1e-70 269.6 198 68.7
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 3.1e-70 269.6 262 56.5
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 3.4e-69 266.2 183 73.8
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 9.2e-67 258.1 195 68.7
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 3.5e-66 256.1 303 48.2
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 1.5e-64 250.8 187 69.5
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 3.6e-63 246.1 188 68.6
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 5.8e-61 238.8 187 66.3
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 7.1e-59 231.9 269 47.2
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 1.6e-58 230.7 247 47.8
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 6.0e-58 228.8 208 58.2
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.1e-48 198.0 272 48.2
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 7.3e-48 195.3 170 57.6
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 6.7e-41 172.2 212 43.4
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.6e-39 167.5 184 53.3
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 2.9e-36 156.8 277 35.4
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 6.0e-34 149.1 89 80.9
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 6.5e-28 129.0 82 84.1
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 4.2e-27 126.3 168 39.3
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 8.2e-23 112.1 278 31.3
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.8e-22 110.9 57 91.2
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 2.4e-22 110.5 54 96.3
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 1.6e-18 97.8 52 86.5
Glyma.07G142100 Glycine max HOM05D005750 ORTHO05D007126 5.3e-06 56.2 39 69.2
FvH4_2g13931 Fragaria vesca HOM05D051764 ORTHO05D035649 9.1e-06 55.5 49 63.3


User provided reference genes

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