Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G0211 Tripterygium wilfordii HOM05D003155 ORTHO05D012487 1.6e-71 272.7 143 100.0
TWI53G0331 Tripterygium wilfordii HOM05D003155 ORTHO05D012487 9.7e-69 263.5 143 98.6
TWI09G1633 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 5.0e-65 251.1 142 92.3
HanXRQChr06g0174841 Helianthus annuus HOM05D003155 ORTHO05D004342 8.3e-36 154.1 146 61.6
Haze_05010 Corylus avellana HOM05D003155 ORTHO05D004342 1.1e-35 153.7 142 62.0
CsaV3_5G001710 Cucumis sativus L. HOM05D003155 ORTHO05D004342 9.2e-35 150.6 153 60.1
Cfa005838 Carpinus fangiana HOM05D003155 ORTHO05D004342 2.0e-34 149.4 142 61.3
arahy.Tifrunner.gnm1.ann1.PM89VL Arachis hypogaea HOM05D003155 ORTHO05D004342 3.5e-34 148.7 142 60.6
MELO3C005781.2 Cucumis melo HOM05D003155 ORTHO05D004342 3.5e-34 148.7 153 59.5
ECA248G1812 Erigeron canadensis HOM05D003155 ORTHO05D004342 3.5e-34 148.7 142 62.7
Potri.014G123000 Populus trichocarpa HOM05D003155 ORTHO05D004342 3.5e-34 148.7 150 61.3
vmacro12338 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 3.5e-34 148.7 139 61.9
Lj5g0009987 Lotus japonicus HOM05D003155 ORTHO05D004342 4.5e-34 148.3 95 80.0
Potri.002G198600 Populus trichocarpa HOM05D003155 ORTHO05D004342 4.5e-34 148.3 155 60.6
Manes.01G225900 Manihot esculenta HOM05D003155 ORTHO05D004342 5.9e-34 147.9 113 70.8
Cc00_g15210 Coffea canephora HOM05D003155 ORTHO05D004342 1.3e-33 146.7 104 75.0
arahy.Tifrunner.gnm1.ann1.DJPQ45 Arachis hypogaea HOM05D003155 ORTHO05D004342 1.7e-33 146.4 142 59.9
Hma1.2p1_1785F.1_g302280 Hydrangea macrophylla HOM05D003155 ORTHO05D004342 2.3e-33 146.0 157 56.7
Actinidia11005 Actinidia chinensis HOM05D003155 ORTHO05D004342 2.9e-33 145.6 130 63.8
Glyma.05G192900 Glycine max HOM05D003155 ORTHO05D004342 2.9e-33 145.6 138 61.6
Lsat_1_v5_gn_3_29341 Lactuca sativa HOM05D003155 ORTHO05D004342 2.9e-33 145.6 142 61.3
SGA_v2.0_scaffold223G42841 Striga asiatica HOM05D003155 ORTHO05D004342 2.9e-33 145.6 99 76.8
CANSAT25G1273 Cannabis sativa HOM05D003155 ORTHO05D004342 3.8e-33 145.2 95 78.9
Medtr8g093860 Medicago truncatula HOM05D003155 ORTHO05D004342 3.8e-33 145.2 139 60.4
Sabra02G0159100 Salix brachista HOM05D003155 ORTHO05D004342 3.8e-33 145.2 155 58.7
Migut.M01874 Erythranthe guttata HOM05D003155 ORTHO05D004342 5.0e-33 144.8 104 75.0
Cpa.g.sc8.158 Carica papaya HOM05D003155 ORTHO05D004342 6.6e-33 144.4 161 57.8
CDE11G0169 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 6.6e-33 144.4 83 85.5
SalBow8G2165 Salvia bowleyana HOM05D003155 ORTHO05D004342 6.6e-33 144.4 83 85.5
TAR362G0238 Trochodendron aralioides HOM05D003155 ORTHO05D004342 6.6e-33 144.4 150 60.7
Ca_22781_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 8.6e-33 144.1 96 80.2
HanXRQChr17g0540071 Helianthus annuus HOM05D003155 ORTHO05D004342 8.6e-33 144.1 149 59.1
EL10Ac9g21469 Beta vulgaris HOM05D003155 ORTHO05D004342 1.1e-32 143.7 124 65.3
CiPaw.13G147200 Carya illinoinensis HOM05D003155 ORTHO05D004342 1.1e-32 143.7 153 56.9
Lj4g0014336 Lotus japonicus HOM05D003155 ORTHO05D004342 1.1e-32 143.7 95 77.9
SGA_v2.0_scaffold1G00231 Striga asiatica HOM05D003155 ORTHO05D004342 1.1e-32 143.7 102 72.5
VMungo0251G2281 Vigna mungo HOM05D003155 ORTHO05D004342 1.1e-32 143.7 139 59.7
Carub.0005s2164 Capsella rubella HOM05D003155 ORTHO05D004342 1.5e-32 143.3 105 73.3
Nitab4.5_0000317g0060 Nicotiana tabacum HOM05D003155 ORTHO05D004342 1.5e-32 143.3 119 68.1
Atru.chr10.1937 Acer truncatum HOM05D003155 ORTHO05D004342 1.9e-32 142.9 153 59.5
COL.COLO4_23262 Corchorus olitorius HOM05D003155 ORTHO05D004342 1.9e-32 142.9 95 78.9
SalBow2G2017 Salvia bowleyana HOM05D003155 ORTHO05D004342 1.9e-32 142.9 95 77.9
TPR.G37349 Trifolium pratense HOM05D003155 ORTHO05D004342 1.9e-32 142.9 140 60.0
ATR0693G061 Amborella trichopoda HOM05D003155 ORTHO05D004342 2.5e-32 142.5 99 75.8
CAN.G630.85 Capsicum annuum HOM05D003155 ORTHO05D004342 2.5e-32 142.5 98 76.5
Cc11_g04240 Coffea canephora HOM05D003155 ORTHO05D004342 2.5e-32 142.5 130 64.6
Manes.05G001800 Manihot esculenta HOM05D003155 ORTHO05D004342 2.5e-32 142.5 152 59.2
Nitab4.5_0002557g0030 Nicotiana tabacum HOM05D003155 ORTHO05D004342 2.5e-32 142.5 119 68.1
Oeu040091.1 Olea europaea HOM05D003155 ORTHO05D004342 2.5e-32 142.5 94 79.8
Peaxi162Scf00591g00412 Petunia axillaris HOM05D003155 ORTHO05D004342 3.3e-32 142.1 114 68.4
Hund06387 Selenicereus undatus HOM05D003155 ORTHO05D004342 3.3e-32 142.1 102 73.5
MSTRG.7527 Avicennia marina HOM05D003155 ORTHO05D004342 4.3e-32 141.7 74 93.2
THA.LOC104817470 Tarenaya hassleriana HOM05D003155 ORTHO05D004342 4.3e-32 141.7 74 93.2
GSVIVG01011409001 Vitis vinifera HOM05D003155 ORTHO05D004342 4.3e-32 141.7 102 73.5
AUR62013115 Chenopodium quinoa HOM05D003155 ORTHO05D004342 5.6e-32 141.4 85 83.5
Duzib138G0641 Durio zibethinus HOM05D003155 ORTHO05D004342 5.6e-32 141.4 74 93.2
Lalb_Chr08g0238231 Lupinus albus HOM05D003155 ORTHO05D004342 5.6e-32 141.4 88 81.8
Hund00057 Selenicereus undatus HOM05D003155 ORTHO05D004342 5.6e-32 141.4 95 77.9
Sc08g0003390 Simmondsia chinensis HOM05D003155 ORTHO05D004342 5.6e-32 141.4 146 60.3
CSS0028730 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 7.3e-32 141.0 154 59.1
PGSC0003DMG400023032 Solanum tuberosum HOM05D003155 ORTHO05D004342 7.3e-32 141.0 89 82.0
CARHR165020 Cardamine hirsuta HOM05D003155 ORTHO05D004342 9.5e-32 140.6 95 76.8
Cfa005833 Carpinus fangiana HOM05D003155 ORTHO05D004342 9.5e-32 140.6 153 56.2
Ca_14922_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 9.5e-32 140.6 140 62.1
ClCG01G001560 Citrullus lanatus HOM05D003155 ORTHO05D004342 9.5e-32 140.6 155 58.1
Eucgr.L02454 Eucalyptus grandis HOM05D003155 ORTHO05D004342 9.5e-32 140.6 85 82.4
Eucgr.L03298 Eucalyptus grandis HOM05D003155 ORTHO05D012487 9.5e-32 140.6 85 82.4
Sed0004341 Sechium edule HOM05D003155 ORTHO05D004342 9.5e-32 140.6 142 57.0
Solyc04g058090.3 Solanum lycopersicum HOM05D003155 ORTHO05D004342 9.5e-32 140.6 105 71.4
AT3G55010 Arabidopsis thaliana HOM05D003155 ORTHO05D004342 1.2e-31 140.2 132 65.2
Gohir.D11G116300 Gossypium hirsutum HOM05D003155 ORTHO05D004342 1.2e-31 140.2 79 87.3
Gorai.007G124500 Gossypium raimondii HOM05D003155 ORTHO05D004342 1.2e-31 140.2 79 87.3
MBI19_g29997_MAGBIO Magnolia biondii HOM05D003155 ORTHO05D004342 1.2e-31 140.2 152 58.6
Dinv33099 Davidia involucrata HOM05D003155 ORTHO05D004342 1.6e-31 139.8 160 56.2
Glyma.08G001000 Glycine max HOM05D003155 ORTHO05D004342 1.6e-31 139.8 145 59.3
Prupe.1G528600 Prunus persica HOM05D003155 ORTHO05D004342 1.6e-31 139.8 104 71.2
AL5G36130 Arabidopsis lyrata HOM05D003155 ORTHO05D004342 2.1e-31 139.4 139 60.4
TAR362G0957 Trochodendron aralioides HOM05D003155 ORTHO05D004342 2.1e-31 139.4 119 66.4
Sopen04g025920 Solanum pennellii HOM05D003155 ORTHO05D004342 2.8e-31 139.0 75 90.7
BcaC08g44717 Brassica carinata HOM05D003155 ORTHO05D004342 3.6e-31 138.7 136 61.0
AUR62010120 Chenopodium quinoa HOM05D003155 ORTHO05D004342 3.6e-31 138.7 143 56.6
ECA246G1648 Erigeron canadensis HOM05D003155 ORTHO05D001887 3.6e-31 138.7 146 56.2
Thecc.01G310300 Theobroma cacao HOM05D003155 ORTHO05D004342 3.6e-31 138.7 151 55.6
GSVIVG01028086001 Vitis vinifera HOM05D003155 ORTHO05D004342 3.6e-31 138.7 161 54.0
CiPaw.07G115200 Carya illinoinensis HOM05D003155 ORTHO05D004342 4.7e-31 138.3 148 56.1
Aa31sc33G80 Aethionema arabicum HOM05D003155 ORTHO05D004342 6.1e-31 137.9 105 74.3
CAN.G405.2 Capsicum annuum HOM05D003155 ORTHO05D004342 6.1e-31 137.9 99 73.7
Eucgr.A02767 Eucalyptus grandis HOM05D003155 ORTHO05D004342 6.1e-31 137.9 80 86.2
FAN19G1072 Fragaria x ananassa HOM05D003155 ORTHO05D004342 6.1e-31 137.9 105 70.5
FAN23G2124 Fragaria x ananassa HOM05D003155 ORTHO05D004342 6.1e-31 137.9 105 70.5
FAN26G2094 Fragaria x ananassa HOM05D003155 ORTHO05D004342 6.1e-31 137.9 105 70.5
FAN28G3015 Fragaria x ananassa HOM05D003155 ORTHO05D004342 6.1e-31 137.9 105 70.5
Peaxi162Scf00066g00524 Petunia axillaris HOM05D003155 ORTHO05D004342 6.1e-31 137.9 89 80.9
Phvul.002G273500 Phaseolus vulgaris HOM05D003155 ORTHO05D004342 6.1e-31 137.9 146 57.5
SEGI_27039 Sequoiadendron giganteum HOM05D003155 ORTHO05D004342 6.1e-31 137.9 120 62.5
Aqoxy5G00145 Aquilegia oxysepala HOM05D003155 ORTHO05D004342 8.0e-31 137.5 82 85.4
DCAR_027274 Daucus carota HOM05D003155 ORTHO05D004342 8.0e-31 137.5 101 68.3
PSO675G7447 Papaver somniferum HOM05D003155 ORTHO05D004342 8.0e-31 137.5 107 69.2
Sp5g07410 Schrenkiella parvula HOM05D003155 ORTHO05D004342 8.0e-31 137.5 118 65.3
PSO541G5346 Papaver somniferum HOM05D003155 ORTHO05D004342 1.0e-30 137.1 73 91.8
DCAR_024227 Daucus carota HOM05D003155 ORTHO05D004342 1.4e-30 136.7 157 56.1
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 1.8e-30 136.3 131 62.6
Lj3A1064T100 Lonicera japonica HOM05D003155 ORTHO05D004342 1.8e-30 136.3 157 57.3
RcHm_v2.0_Chr2g0117751 Rosa chinensis HOM05D003155 ORTHO05D004342 1.8e-30 136.3 104 73.1
Gohir.A11G111100 Gossypium hirsutum HOM05D003155 ORTHO05D004342 2.3e-30 136.0 152 55.9
BcaB02g07704 Brassica carinata HOM05D003155 ORTHO05D004342 4.0e-30 135.2 144 56.2
FvH4_1g23040 Fragaria vesca HOM05D003155 ORTHO05D004342 4.0e-30 135.2 105 69.5
MD15G1382400 Malus domestica HOM05D003155 ORTHO05D004342 6.8e-30 134.4 113 66.4
PGR066G0004 Punica granatum HOM05D003155 ORTHO05D004342 6.8e-30 134.4 88 76.1
PGR142G1043 Punica granatum HOM05D003155 ORTHO05D004342 6.8e-30 134.4 88 76.1
Zm00001eb284260 Zea mays HOM05D003155 ORTHO05D004342 6.8e-30 134.4 80 83.8
C06p22560 Brassica napus HOM05D003155 ORTHO05D004342 8.9e-30 134.0 137 60.6
BolC6t37446H Brassica oleracea HOM05D003155 ORTHO05D004342 8.9e-30 134.0 137 60.6
BcaB01g00135 Brassica carinata HOM05D003155 ORTHO05D004342 2.0e-29 132.9 126 63.5
BcaNung04653 Brassica carinata HOM05D003155 ORTHO05D004342 2.0e-29 132.9 139 56.8
Nn3g21630 Nelumbo nucifera HOM05D003155 ORTHO05D004342 2.6e-29 132.5 151 55.0
AagrBONN_evm.TU.Sc2ySwM_368.880 Anthoceros agrestis HOM05D003155 ORTHO05D004342 3.4e-29 132.1 106 67.0
Thhalv10010436m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 4.4e-29 131.7 81 80.2
A09p48030 Brassica napus HOM05D003155 ORTHO05D004342 5.8e-29 131.3 115 67.0
Mapoly0003s0273 Marchantia polymorpha HOM05D003155 ORTHO05D004342 5.8e-29 131.3 74 86.5
BraA09t40256Z Brassica rapa HOM05D003155 ORTHO05D004342 7.5e-29 131.0 116 66.4
MD08G1194300 Malus domestica HOM05D003155 ORTHO05D004342 7.5e-29 131.0 116 62.9
Oeu008950.2 Olea europaea HOM05D003155 ORTHO05D004342 9.8e-29 130.6 100 70.0
SMO116G0007 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 9.8e-29 130.6 74 86.5
AagrBONN_evm.TU.Sc2ySwM_344.1369 Anthoceros agrestis HOM05D003155 ORTHO05D004342 1.7e-28 129.8 74 85.1
MD08G1194700 Malus domestica HOM05D003155 ORTHO05D004342 2.9e-28 129.0 140 57.1
BolC8t50632H Brassica oleracea HOM05D003155 ORTHO05D004342 3.7e-28 128.6 114 68.4
Os03g0831500 Oryza sativa ssp. japonica HOM05D003155 ORTHO05D004342 3.7e-28 128.6 76 80.3
A07p22400 Brassica napus HOM05D003155 ORTHO05D004342 4.9e-28 128.3 137 57.7
C08p30250 Brassica napus HOM05D003155 ORTHO05D004342 4.9e-28 128.3 140 56.4
CBR_g16871 Chara braunii HOM05D003155 ORTHO05D004342 4.9e-28 128.3 80 78.8
Lsat_1_v5_gn_8_28960 Lactuca sativa HOM05D003155 ORTHO05D004342 4.9e-28 128.3 79 81.0
HPP92_001922 Vanilla planifolia HOM05D003155 ORTHO05D004342 6.4e-28 127.9 74 85.1
CSS0047504 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 8.3e-28 127.5 154 51.9
Thhalv10018710m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 8.3e-28 127.5 124 58.1
BraA07t29916Z Brassica rapa HOM05D003155 ORTHO05D004342 1.4e-27 126.7 146 54.8
Medtr5g093890 Medicago truncatula HOM05D003155 ORTHO05D004342 4.1e-27 125.2 70 88.6
Pp3c5_3030 Physcomitrium patens HOM05D003155 ORTHO05D004342 4.1e-27 125.2 137 54.0
Pp3c6_25750 Physcomitrium patens HOM05D003155 ORTHO05D004342 4.1e-27 125.2 134 56.0
Ah.01g001460 Amaranthus hybridus HOM05D003155 ORTHO05D003938 7.0e-27 124.4 120 59.2
Dinv10072 Davidia involucrata HOM05D003155 ORTHO05D004342 1.6e-26 123.2 66 90.9
PGR119G0649 Punica granatum HOM05D003155 ORTHO05D004342 4.6e-26 121.7 154 51.3
PRCOL_00001570 Prasinoderma coloniale HOM05D003155 ORTHO05D004342 8.6e-25 117.5 73 78.1
TPR.G31811 Trifolium pratense HOM05D003155 ORTHO05D004342 1.1e-24 117.1 96 68.8
SMO232G0073 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 5.6e-24 114.8 70 84.3
Cre07.g318750 Chlamydomonas reinhardtii HOM05D003155 ORTHO05D004342 7.3e-24 114.4 79 74.7
TPR.G22009 Trifolium pratense HOM05D003155 ORTHO05D012487 4.7e-23 111.7 94 69.1
unitig_37.g12904 Utricularia gibba HOM05D003155 ORTHO05D004342 4.7e-23 111.7 87 70.1
Psat7g045040 Pisum sativum HOM05D003155 ORTHO05D004342 1.1e-19 100.5 122 51.6
MD15G1382500 Malus domestica HOM05D003155 ORTHO05D004342 2.4e-19 99.4 74 74.3
MD08G1193800 Malus domestica HOM05D003155 ORTHO05D004342 3.2e-19 99.0 75 72.0
MD08G1194800 Malus domestica HOM05D003155 ORTHO05D004342 3.2e-19 99.0 75 72.0
MD08G1195100 Malus domestica HOM05D003155 ORTHO05D004342 3.2e-19 99.0 75 72.0
Sp5g14230 Schrenkiella parvula HOM05D003155 ORTHO05D004342 7.8e-18 94.4 95 57.9
CDE05G1659 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 5.0e-17 91.7 47 93.6
MD05G1254600 Malus domestica HOM05D003155 ORTHO05D004342 9.5e-16 87.4 157 45.2
vmacro23397 Vaccinium macrocarpon HOM05D003155 ORTHO05D012487 2.8e-15 85.9 121 47.9
EL10Ac1g01546 Beta vulgaris HOM05D003155 ORTHO05D004342 1.4e-14 83.6 49 85.7
Zm00001eb350100 Zea mays HOM05D003155 ORTHO05D012487 1.8e-14 83.2 51 80.4
Nn4g25655 Nelumbo nucifera HOM05D003155 ORTHO05D012487 4.9e-12 75.1 121 45.5
RcHm_v2.0_Chr5g0059271 Rosa chinensis HOM05D003155 ORTHO05D004342 4.9e-12 75.1 100 49.0
TPR.G14992 Trifolium pratense HOM05D003155 ORTHO05D410879 9.2e-11 70.9 105 45.7
vmacro23398 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.6e-10 70.1 37 89.2
Cc11_g04200 Coffea canephora HOM05D003155 ORTHO05D012487 4.6e-10 68.6 62 62.9
COL.COLO4_33959 Corchorus olitorius HOM05D003155 ORTHO05D012487 4.6e-10 68.6 33 97.0
C02p25090 Brassica napus HOM05D003155 ORTHO05D012487 1.7e-09 66.6 43 76.7
BolC2t08589H Brassica oleracea HOM05D003155 ORTHO05D012487 1.7e-09 66.6 43 76.7
MD08G1195000 Malus domestica HOM05D003155 ORTHO05D004342 1.7e-09 66.6 52 71.2
Haze_26160 Corylus avellana HOM05D003155 ORTHO05D004342 5.1e-09 65.1 83 45.8
RcHm_v2.0_Chr7g0218451 Rosa chinensis HOM05D003155 ORTHO05D004342 5.1e-09 65.1 105 44.8
Zm00001eb115440 Zea mays HOM05D003155 ORTHO05D004342 2.5e-08 62.8 36 83.3
Lsat_1_v5_gn_4_184420 Lactuca sativa HOM05D003155 ORTHO05D012487 4.3e-08 62.0 45 66.7
Cfa023437 Carpinus fangiana HOM05D000974 ORTHO05D006000 1.6e-07 60.1 156 34.6
Lsat_1_v5_gn_7_86280 Lactuca sativa HOM05D003155 ORTHO05D012487 6.2e-07 58.2 45 62.2
CARHR165030 Cardamine hirsuta HOM05D003155 ORTHO05D004342 1.4e-06 57.0 32 84.4


User provided reference genes

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