Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI39G0280 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 7.1e-51 203.8 112 100.0
TWI39G0880 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 1.3e-23 113.2 128 58.6
TWI39G0715 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 4.8e-23 111.3 128 58.6
Duzib128G0642 Durio zibethinus HOM05D000307 ORTHO05D000166 1.5e-11 73.2 112 42.9
Thecc.05G107100 Theobroma cacao HOM05D000307 ORTHO05D000166 7.2e-11 70.9 126 38.9
Duzib106G1547 Durio zibethinus HOM05D000307 ORTHO05D000166 2.1e-10 69.3 126 38.1
Duzib128G0455 Durio zibethinus HOM05D000307 ORTHO05D000166 2.7e-10 68.9 126 38.9
Potri.016G068132 Populus trichocarpa HOM05D000307 ORTHO05D000166 3.6e-10 68.6 128 39.8
Thecc.05G106900 Theobroma cacao HOM05D000307 ORTHO05D000166 3.6e-10 68.6 126 36.5
Haze_20142 Corylus avellana HOM05D000307 ORTHO05D000166 8.0e-10 67.4 126 40.5
Haze_20144 Corylus avellana HOM05D000307 ORTHO05D000166 1.0e-09 67.0 126 38.1
Thecc.05G106800 Theobroma cacao HOM05D000307 ORTHO05D000166 2.3e-09 65.9 126 34.1
QL07p027349 Quercus lobata HOM05D000307 ORTHO05D000166 3.0e-09 65.5 126 36.5
Cfa020055 Carpinus fangiana HOM05D000307 ORTHO05D000166 8.8e-09 63.9 126 38.9
Atru.chr12.895 Acer truncatum HOM05D000307 ORTHO05D000166 1.5e-08 63.2 128 35.9
Gohir.D11G332700 Gossypium hirsutum HOM05D000307 ORTHO05D000166 3.4e-08 62.0 127 32.3
Potri.006G201700 Populus trichocarpa HOM05D000307 ORTHO05D000166 3.4e-08 62.0 128 38.3
Manes.08G035100 Manihot esculenta HOM05D000307 ORTHO05D000166 4.4e-08 61.6 119 36.1
CDE05G1214 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 5.7e-08 61.2 129 36.4
Ciclev10013876m.g Citrus clementina HOM05D000307 ORTHO05D000166 5.7e-08 61.2 125 36.8
COL.COLO4_29535 Corchorus olitorius HOM05D000307 ORTHO05D000166 7.5e-08 60.8 126 34.1
Prupe.7G092900 Prunus persica HOM05D000307 ORTHO05D000166 7.5e-08 60.8 119 35.3
TWI39G0918 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 1.3e-07 60.1 57 59.6
Gorai.007G363700 Gossypium raimondii HOM05D000307 ORTHO05D000166 1.7e-07 59.7 124 32.3
Prupe.1G168600 Prunus persica HOM05D000307 ORTHO05D000166 1.7e-07 59.7 126 33.3
Sabra06G0155200 Salix brachista HOM05D000307 ORTHO05D000166 1.7e-07 59.7 128 34.4
Nn4g25289 Nelumbo nucifera HOM05D000307 ORTHO05D000166 2.2e-07 59.3 119 36.1
Aqoxy5G02851 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 3.7e-07 58.5 121 31.4
COL.COLO4_29537 Corchorus olitorius HOM05D000307 ORTHO05D000166 3.7e-07 58.5 119 36.1
Thhalv10002350m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 4.8e-07 58.2 108 35.2
Lj2g0018661 Lotus japonicus HOM05D000307 ORTHO05D000166 4.8e-07 58.2 109 39.4
SHI28290 Sapria himalayana HOM05D000307 ORTHO05D000166 4.8e-07 58.2 124 37.1
Atru.chr1.1376 Acer truncatum HOM05D000307 ORTHO05D000166 8.3e-07 57.4 126 34.1
CANSAT25G0806 Cannabis sativa HOM05D000307 ORTHO05D000166 1.1e-06 57.0 117 38.5
Thhalv10002789m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 1.1e-06 57.0 119 34.5
QL04p024253 Quercus lobata HOM05D000307 ORTHO05D000166 1.1e-06 57.0 117 39.3
TAR636G2648 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.4e-06 56.6 119 36.1
Thhalv10019667m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 1.8e-06 56.2 125 34.4
HPP92_001175 Vanilla planifolia HOM05D000307 ORTHO05D000166 1.8e-06 56.2 119 37.0
CANSAT64G2378 Cannabis sativa HOM05D000307 ORTHO05D000166 3.1e-06 55.5 120 35.0
CARHR102130 Cardamine hirsuta HOM05D000307 ORTHO05D000166 3.1e-06 55.5 119 33.6
Prupe.7G092700 Prunus persica HOM05D000307 ORTHO05D000166 3.1e-06 55.5 126 33.3
Atru.chr7.769 Acer truncatum HOM05D000307 ORTHO05D000166 4.1e-06 55.1 126 31.7
Atru.chr7.788 Acer truncatum HOM05D000307 ORTHO05D000166 4.1e-06 55.1 126 31.7
ClCG01G010290 Citrullus lanatus HOM05D000307 ORTHO05D000166 4.1e-06 55.1 120 34.2
Haze_02940 Corylus avellana HOM05D000307 ORTHO05D000166 5.4e-06 54.7 117 35.0
Thhalv10019516m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 5.4e-06 54.7 119 31.9
Manes.09G043800 Manihot esculenta HOM05D000307 ORTHO05D000166 5.4e-06 54.7 126 35.7
Cfa010997 Carpinus fangiana HOM05D000307 ORTHO05D000166 7.0e-06 54.3 117 35.0
CDE05G0729 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 7.0e-06 54.3 127 33.9
Gohir.A09G140500 Gossypium hirsutum HOM05D000307 ORTHO05D000166 7.0e-06 54.3 126 31.7
Gohir.A09G140801 Gossypium hirsutum HOM05D000307 ORTHO05D000166 7.0e-06 54.3 126 31.7
Psat5g119400 Pisum sativum HOM05D000307 ORTHO05D000166 7.0e-06 54.3 125 35.2
Prupe.6G303900 Prunus persica HOM05D000307 ORTHO05D000166 7.0e-06 54.3 128 32.0
TWI12G0834 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 7.0e-06 54.3 120 34.2
Atru.chr8.1074 Acer truncatum HOM05D000307 ORTHO05D000166 9.1e-06 53.9 118 35.6
Carub.0006s2432 Capsella rubella HOM05D000307 ORTHO05D000166 9.1e-06 53.9 117 32.5
CARHR101660 Cardamine hirsuta HOM05D000307 ORTHO05D000166 9.1e-06 53.9 119 32.8
Thhalv10002346m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 9.1e-06 53.9 119 31.9
Thhalv10019579m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 9.1e-06 53.9 119 31.9
FvH4_6g21170 Fragaria vesca HOM05D000307 ORTHO05D000166 9.1e-06 53.9 128 32.8
FAN14G1606 Fragaria x ananassa HOM05D000307 ORTHO05D000166 9.1e-06 53.9 128 32.8
TWI38G0721 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 9.1e-06 53.9 120 34.2


User provided reference genes

Program Settings