Gene: COL.COLO4_29535

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_29535
  • Transcript Identifier COL.rna28252
  • Gene Type Coding gene
  • Location AWUE01020370.1 : 94572-95708 : negative

Gene Family Information

  • ID HOM05D000307
  • #Genes/#Species 1483/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna28252
  • GenBank OMO68630.1
  • id gene29507
  • gene_name COLO4_29535
  • uniprot A0A1R3HE81

Descriptions

  • Description Transcription factor, MADS-box
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000987
IEA
GOA Databasecis-regulatory region sequence-specific DNA binding
GO:0000987
IEA
InterProcis-regulatory region sequence-specific DNA binding
GO:0000981
IEA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000981
IEA
InterProDNA-binding transcription factor activity, RNA polymerase II-specific

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002100 Transcription factor, MADS-box
IPR036879 Transcription factor, MADS-box superfamily
IPR033897 MADS SRF-like
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)