Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI34G0404 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 1.2e-129 466.5 229 100.0
TWI63G0268 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 4.6e-105 384.8 218 84.4
Potri.006G238000 Populus trichocarpa HOM05D005944 ORTHO05D007188 1.5e-84 316.6 226 68.1
Cfa013369 Carpinus fangiana HOM05D005944 ORTHO05D007188 1.7e-83 313.2 217 70.5
VMungo1309G1803 Vigna mungo HOM05D005944 ORTHO05D007188 2.2e-83 312.8 214 69.2
Hma1.2p1_0049F.1_g028530 Hydrangea macrophylla HOM05D005944 ORTHO05D007188 2.9e-83 312.4 225 68.9
Phvul.009G110100 Phaseolus vulgaris HOM05D005944 ORTHO05D007188 5.0e-83 311.6 214 69.2
TPR.G15103 Trifolium pratense HOM05D005944 ORTHO05D007188 6.5e-83 311.2 220 67.3
Haze_21893 Corylus avellana HOM05D005944 ORTHO05D007188 8.5e-83 310.8 216 69.9
Manes.16G075200 Manihot esculenta HOM05D005944 ORTHO05D007188 1.9e-82 309.7 224 66.1
Prupe.1G447700 Prunus persica HOM05D005944 ORTHO05D007188 1.9e-82 309.7 229 67.2
CSS0001771 Camellia sinensis var. sinensis HOM05D005944 ORTHO05D007188 3.2e-82 308.9 222 68.9
QL12p041319 Quercus lobata HOM05D005944 ORTHO05D007188 9.4e-82 307.4 237 65.0
Gohir.A06G092600 Gossypium hirsutum HOM05D005944 ORTHO05D007188 4.7e-81 305.1 216 69.0
Gohir.D06G092200 Gossypium hirsutum HOM05D005944 ORTHO05D007188 6.1e-81 304.7 217 68.7
Thecc.09G045700 Theobroma cacao HOM05D005944 ORTHO05D007188 6.1e-81 304.7 233 65.2
CiPaw.08G026000 Carya illinoinensis HOM05D005944 ORTHO05D007188 6.7e-80 301.2 231 66.2
Cc08_g09670 Coffea canephora HOM05D005944 ORTHO05D007188 6.7e-80 301.2 223 64.1
Medtr3g109690 Medicago truncatula HOM05D005944 ORTHO05D007188 6.7e-80 301.2 206 66.5
Psat5g021160 Pisum sativum HOM05D005944 ORTHO05D007188 8.8e-80 300.8 207 66.2
TAR626G0255 Trochodendron aralioides HOM05D005944 ORTHO05D007188 2.0e-79 299.7 216 67.6
Gorai.010G106200 Gossypium raimondii HOM05D005944 ORTHO05D007188 2.6e-79 299.3 217 67.7
Cpa.g.sc78.4 Carica papaya HOM05D005944 ORTHO05D007188 4.4e-79 298.5 243 63.8
Glyma.06G086100 Glycine max HOM05D005944 ORTHO05D007188 4.4e-79 298.5 204 70.6
MD08G1113400 Malus domestica HOM05D005944 ORTHO05D007188 4.4e-79 298.5 249 63.1
vmacro23277 Vaccinium macrocarpon HOM05D005944 ORTHO05D007188 4.4e-79 298.5 238 61.8
Rhsim07G0147000 Rhododendron simsii HOM05D005944 ORTHO05D007188 5.7e-79 298.1 239 63.2
Duzib168G0738 Durio zibethinus HOM05D005944 ORTHO05D007188 7.4e-79 297.7 219 65.8
COL.COLO4_20974 Corchorus olitorius HOM05D005944 ORTHO05D007188 2.2e-78 296.2 216 65.7
Lalb_Chr11g0064511 Lupinus albus HOM05D005944 ORTHO05D007188 2.2e-78 296.2 232 62.5
CiPaw.07G203800 Carya illinoinensis HOM05D005944 ORTHO05D007188 3.7e-78 295.4 225 65.8
Sabra06G0186300 Salix brachista HOM05D005944 ORTHO05D007188 4.8e-78 295.0 220 66.8
Ca_15588_v3 Cicer arietinum L. HOM05D005944 ORTHO05D007188 8.2e-78 294.3 213 65.3
Ciclev10009275m.g Citrus clementina HOM05D005944 ORTHO05D007188 4.1e-77 292.0 252 59.5
Oeu031102.1 Olea europaea HOM05D005944 ORTHO05D007188 5.3e-77 291.6 224 63.4
Nn8g39119 Nelumbo nucifera HOM05D005944 ORTHO05D007188 1.2e-76 290.4 222 63.5
Sc09g0009310 Simmondsia chinensis HOM05D005944 ORTHO05D007188 1.0e-75 287.3 217 65.9
Peaxi162Scf00227g00915 Petunia axillaris HOM05D005944 ORTHO05D007188 5.0e-75 285.0 214 65.4
Nitab4.5_0003794g0090 Nicotiana tabacum HOM05D005944 ORTHO05D007188 6.5e-75 284.6 222 62.6
PGSC0003DMG400002225 Solanum tuberosum HOM05D005944 ORTHO05D007188 5.5e-74 281.6 199 67.3
MELO3C011137.2 Cucumis melo HOM05D005944 ORTHO05D007188 9.4e-74 280.8 225 59.1
MBI01_g42891_MAGBIO Magnolia biondii HOM05D005944 ORTHO05D007188 1.2e-73 280.4 208 64.9
Sopen08g020390 Solanum pennellii HOM05D005944 ORTHO05D007188 2.7e-73 279.3 204 65.7
MD15G1092800 Malus domestica HOM05D005944 ORTHO05D007188 3.6e-73 278.9 227 64.3
Solyc08g066550.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 6.1e-73 278.1 212 63.7
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 2.3e-72 276.2 222 61.7
Nitab4.5_0001567g0220 Nicotiana tabacum HOM05D005944 ORTHO05D007188 3.0e-72 275.8 207 65.2
Eucgr.C00599 Eucalyptus grandis HOM05D005944 ORTHO05D007188 3.9e-72 275.4 211 62.6
Sed0020456 Sechium edule HOM05D005944 ORTHO05D007188 2.6e-71 272.7 216 61.6
Aqoxy7G01465 Aquilegia oxysepala HOM05D005944 ORTHO05D007188 7.4e-71 271.2 229 57.2
PSO173G0044 Papaver somniferum HOM05D005944 ORTHO05D007188 9.7e-71 270.8 206 64.1
PGR031G3052 Punica granatum HOM05D005944 ORTHO05D007188 1.7e-70 270.0 227 62.1
MSTRG.11696 Avicennia marina HOM05D005944 ORTHO05D007188 2.2e-70 269.6 227 59.5
Lj1g0013558 Lotus japonicus HOM05D005944 ORTHO05D007188 3.7e-70 268.9 204 62.3
EL10Ac2g04013 Beta vulgaris HOM05D005944 ORTHO05D007188 4.8e-70 268.5 210 62.4
Migut.A00199 Erythranthe guttata HOM05D005944 ORTHO05D007188 4.8e-70 268.5 208 62.0
CANSAT25G1052 Cannabis sativa HOM05D005944 ORTHO05D007188 1.8e-69 266.5 215 63.3
EL10Ac2g04010 Beta vulgaris HOM05D005944 ORTHO05D007188 3.1e-69 265.8 210 61.4
DCAR_003123 Daucus carota HOM05D005944 ORTHO05D007188 5.3e-69 265.0 235 55.7
Sed0026395 Sechium edule HOM05D005944 ORTHO05D007188 4.5e-68 261.9 220 59.1
Ah.10g034990 Amaranthus hybridus HOM05D005944 ORTHO05D007188 1.0e-67 260.8 212 59.4
Lsat_1_v5_gn_5_33661 Lactuca sativa HOM05D005944 ORTHO05D007188 8.5e-67 257.7 203 60.1
ECA246G4186 Erigeron canadensis HOM05D005944 ORTHO05D007188 9.4e-66 254.2 215 59.1
SalBow4G1457 Salvia bowleyana HOM05D005944 ORTHO05D007188 9.4e-66 254.2 202 63.4
AUR62009271 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.2e-65 253.8 222 57.2
AUR62039710 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.6e-65 253.4 210 60.0
Sc09g0009320 Simmondsia chinensis HOM05D005944 ORTHO05D007188 2.7e-65 252.7 215 60.5
Atru.chr7.2083 Acer truncatum HOM05D005944 ORTHO05D007188 3.6e-65 252.3 243 55.1
Nitab4.5_0000664g0190 Nicotiana tabacum HOM05D005944 ORTHO05D007188 4.7e-65 251.9 204 61.3
HanXRQChr08g0234421 Helianthus annuus HOM05D005944 ORTHO05D007188 1.0e-64 250.8 207 60.4
PGSC0003DMG400018561 Solanum tuberosum HOM05D005944 ORTHO05D007188 1.0e-64 250.8 207 61.8
TWI63G1513 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 8.8e-64 247.7 211 59.2
SGA_v2.0_scaffold243G44289 Striga asiatica HOM05D005944 ORTHO05D007188 1.5e-63 246.9 196 61.2
Nitab4.5_0001515g0030 Nicotiana tabacum HOM05D005944 ORTHO05D007188 1.2e-60 237.3 207 56.5
Ah.02g111320 Amaranthus hybridus HOM05D005944 ORTHO05D007188 3.8e-59 232.3 216 53.2
unitig_32.g11474 Utricularia gibba HOM05D005944 ORTHO05D007188 5.0e-59 231.9 203 55.7
Zm00001eb384710 Zea mays HOM05D005944 ORTHO05D007188 1.1e-58 230.7 218 50.5
FvH4_2g35480 Fragaria vesca HOM05D005944 ORTHO05D007188 8.8e-56 221.1 208 51.9
FAN27G2199 Fragaria x ananassa HOM05D005944 ORTHO05D007188 1.2e-55 220.7 208 51.9
RcHm_v2.0_Chr6g0306401 Rosa chinensis HOM05D005944 ORTHO05D007188 2.0e-55 219.9 210 51.0
THA.LOC104799702 Tarenaya hassleriana HOM05D005944 ORTHO05D007188 2.0e-55 219.9 234 51.3
HanXRQChr02g0050591 Helianthus annuus HOM05D005944 ORTHO05D007188 1.7e-54 216.9 186 54.8
FAN20G0862 Fragaria x ananassa HOM05D005944 ORTHO05D007188 6.3e-54 214.9 213 49.3
Os06g0554100 Oryza sativa ssp. japonica HOM05D005944 ORTHO05D007188 8.3e-54 214.5 230 47.4
FAN15G0753 Fragaria x ananassa HOM05D005944 ORTHO05D007188 5.4e-53 211.8 208 50.0
Carub.0006s1010 Capsella rubella HOM05D005944 ORTHO05D007188 1.2e-52 210.7 263 45.2
AUR62011965 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.6e-52 210.3 201 48.8
CARHR201600 Cardamine hirsuta HOM05D005944 ORTHO05D007188 2.7e-52 209.5 257 44.7
Sp6g32000 Schrenkiella parvula HOM05D005944 ORTHO05D007188 4.5e-52 208.8 261 43.7
EL10Ac5g10487 Beta vulgaris HOM05D005944 ORTHO05D007188 5.9e-52 208.4 210 48.6
Thhalv10014372m.g Eutrema salsugineum HOM05D005944 ORTHO05D007188 1.0e-51 207.6 265 43.8
Aa31LG3G15570 Aethionema arabicum HOM05D005944 ORTHO05D007188 3.8e-51 205.7 245 44.1
AL6G22330 Arabidopsis lyrata HOM05D005944 ORTHO05D007188 5.0e-51 205.3 260 45.0
HPP92_024066 Vanilla planifolia HOM05D005944 ORTHO05D007188 5.0e-51 205.3 200 50.5
ECA233G3370 Erigeron canadensis HOM05D005944 ORTHO05D007188 1.9e-50 203.4 200 51.0
A10p26150 Brassica napus HOM05D005944 ORTHO05D007188 4.2e-50 202.2 238 45.8
BolC9t59349H Brassica oleracea HOM05D005944 ORTHO05D007188 4.2e-50 202.2 238 45.8
BraA10t44674Z Brassica rapa HOM05D005944 ORTHO05D007188 4.2e-50 202.2 238 45.8
BcaC04g19210 Brassica carinata HOM05D005944 ORTHO05D007188 9.5e-50 201.1 238 45.4
C09p65200 Brassica napus HOM05D005944 ORTHO05D007188 9.5e-50 201.1 238 45.4
BcaB08g37038 Brassica carinata HOM05D005944 ORTHO05D007188 1.2e-49 200.7 236 46.2
AT5G11620 Arabidopsis thaliana HOM05D005944 ORTHO05D007188 1.4e-48 197.2 261 43.7
HanXRQChr13g0402041 Helianthus annuus HOM05D005944 ORTHO05D007188 1.4e-45 187.2 216 46.3
Glyma.04G084500 Glycine max HOM05D005944 ORTHO05D007188 7.8e-44 181.4 122 73.0
Actinidia14678 Actinidia chinensis HOM05D005944 ORTHO05D007188 5.0e-43 178.7 216 47.2
Peaxi162Scf00247g00005 Petunia axillaris HOM05D005944 ORTHO05D007188 6.1e-41 171.8 125 65.6
ATR0561G048 Amborella trichopoda HOM05D005944 ORTHO05D007188 2.3e-40 169.9 203 46.3
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 1.5e-39 167.2 196 44.4
Sopen11g028870 Solanum pennellii HOM05D010581 ORTHO05D012655 5.8e-39 165.2 157 56.7
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 7.5e-39 164.9 201 42.8
Solyc11g071190.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 1.9e-37 160.2 126 64.3
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 1.0e-35 154.5 201 40.3
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 3.9e-35 152.5 203 43.3
PSO507G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 8.6e-35 151.4 182 46.7
Zm00001eb277580 Zea mays HOM05D005944 ORTHO05D007188 2.4e-29 133.3 176 43.2
SEGI_16652 Sequoiadendron giganteum HOM05D005944 ORTHO05D007188 8.6e-27 124.8 207 37.7
Pp3c11_3140 Physcomitrium patens HOM05D005944 ORTHO05D007188 5.6e-26 122.1 232 37.5
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 1.1e-24 117.9 217 35.5
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 2.3e-24 116.7 218 36.2
AagrBONN_evm.TU.Sc2ySwM_228.5588 Anthoceros agrestis HOM05D005944 ORTHO05D007188 1.2e-23 114.4 234 34.2
SMO244G0014 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 5.8e-23 112.1 223 32.7
SMO281G0003 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 7.6e-23 111.7 217 33.2
Cre09.g393550 Chlamydomonas reinhardtii HOM05D005944 ORTHO05D007188 2.7e-20 103.2 223 33.2
CDE05G1550 Ceratophyllum demersum HOM05D005944 ORTHO05D007188 3.9e-19 99.4 103 41.7
RcHm_v2.0_Chr6g0306391 Rosa chinensis HOM05D005944 ORTHO05D007188 3.8e-14 82.8 96 44.8
BolC2t06477H Brassica oleracea HOM05D005944 ORTHO05D007188 1.6e-12 77.4 164 34.1
RcHm_v2.0_Chr6g0306281 Rosa chinensis HOM05D005944 ORTHO05D007188 2.1e-12 77.0 56 55.4
C02p05290 Brassica napus HOM05D005944 ORTHO05D007188 4.6e-12 75.9 164 33.5
RcHm_v2.0_Chr6g0306291 Rosa chinensis HOM05D005944 ORTHO05D007188 7.8e-12 75.1 73 45.2
MCO02G382 Micromonas commoda HOM05D005944 ORTHO05D007188 1.0e-11 74.7 220 30.5
Mapoly0068s0072 Marchantia polymorpha HOM05D005944 ORTHO05D007188 3.1e-08 63.2 142 29.6


User provided reference genes

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