Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 1.3e-273 945.7 455 100.0
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 1.2e-192 676.8 468 71.8
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 3.8e-191 671.8 453 71.5
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 2.4e-190 669.1 457 70.5
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 9.3e-190 667.2 452 71.2
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 2.1e-189 666.0 448 71.0
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 6.6e-188 661.0 466 68.7
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 7.3e-187 657.5 447 71.6
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 9.0e-185 650.6 473 68.1
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 5.8e-184 647.9 455 69.0
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 1.7e-183 646.4 466 68.0
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.1e-182 643.7 456 69.3
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 2.4e-182 642.5 452 68.1
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.6e-181 639.8 473 66.2
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 1.6e-181 639.8 455 67.5
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 2.7e-181 639.0 473 66.8
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 6.0e-181 637.9 453 67.3
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 6.0e-181 637.9 473 67.2
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 6.7e-180 634.4 452 67.7
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 8.7e-180 634.0 454 68.5
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 4.3e-179 631.7 447 69.4
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 2.8e-178 629.0 466 67.6
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.8e-177 626.3 467 66.4
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 4.0e-177 625.2 478 65.9
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 2.9e-175 619.0 459 66.2
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 4.9e-175 618.2 459 66.7
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 1.4e-174 616.7 475 64.6
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 1.4e-174 616.7 460 67.8
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 8.7e-172 607.4 462 65.2
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 9.6e-171 604.0 452 65.5
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 1.2e-168 597.0 472 63.1
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.5e-168 596.7 450 65.1
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 2.6e-168 595.9 480 63.1
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 1.0e-167 594.0 454 65.0
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 3.8e-167 592.0 457 62.8
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.1e-166 590.5 462 63.9
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 1.9e-166 589.7 455 62.9
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 2.5e-166 589.3 405 71.1
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 2.5e-166 589.3 457 63.0
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 2.5e-166 589.3 521 57.8
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 5.5e-166 588.2 450 64.4
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 9.3e-166 587.4 457 63.0
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 1.2e-165 587.0 458 63.3
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 2.1e-165 586.3 464 62.7
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 1.0e-164 583.9 456 62.5
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 1.3e-164 583.6 456 63.6
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 5.1e-164 581.6 451 63.4
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 4.3e-163 578.6 485 60.0
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 7.4e-163 577.8 456 62.3
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 9.7e-163 577.4 456 62.7
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.3e-162 577.0 473 62.8
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 1.3e-162 577.0 453 62.5
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 1.3e-162 577.0 453 62.7
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.2e-162 576.2 473 61.9
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 3.7e-162 575.5 451 62.7
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 8.2e-162 574.3 491 58.7
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 1.1e-161 573.9 459 63.2
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 3.1e-161 572.4 457 62.4
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 4.1e-161 572.0 450 63.1
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 9.0e-161 570.9 454 60.6
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 9.0e-161 570.9 454 60.6
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 9.0e-161 570.9 483 59.8
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 1.5e-160 570.1 446 61.2
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 1.5e-160 570.1 455 63.3
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 5.9e-160 568.2 451 61.6
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 1.0e-159 567.4 458 61.1
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 2.2e-159 566.2 457 61.9
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 8.5e-159 564.3 452 61.3
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 1.1e-158 563.9 452 61.7
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 2.5e-158 562.8 452 61.1
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 5.5e-158 561.6 454 60.6
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 1.6e-157 560.1 452 61.3
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 1.6e-157 560.1 452 61.3
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 2.1e-157 559.7 454 61.7
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 2.1e-157 559.7 450 60.7
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 1.8e-156 556.6 462 61.3
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 6.7e-156 554.7 460 61.5
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 5.7e-155 551.6 493 57.0
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 2.2e-154 549.7 454 61.0
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.1e-153 547.4 473 59.0
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 5.3e-153 545.0 459 58.8
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 1.2e-152 543.9 479 57.0
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 1.2e-152 543.9 418 65.1
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 1.8e-145 520.0 496 54.0
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 2.0e-144 516.5 464 57.8
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 3.6e-141 505.8 418 60.3
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 5.2e-140 501.9 437 57.7
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 7.4e-139 498.0 348 70.1
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 6.3e-138 495.0 479 54.7
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 1.4e-132 477.2 356 67.1
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 5.7e-131 471.9 357 66.9
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 9.7e-131 471.1 450 53.6
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 2.8e-130 469.5 384 62.0
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 3.7e-130 469.2 387 61.0
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 5.9e-128 461.8 332 69.9
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 7.7e-128 461.5 450 52.9
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 9.8e-115 417.9 365 56.4
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 4.4e-107 392.5 460 45.0
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 2.7e-104 383.3 457 43.8
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 1.1e-102 377.9 513 39.8
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 2.1e-101 373.6 487 40.5
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 3.4e-99 366.3 351 55.6
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 2.4e-97 360.1 289 64.0
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 2.8e-93 346.7 458 40.2
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 2.1e-88 330.5 437 44.2
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 5.6e-78 295.8 449 39.2
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 3.3e-62 243.4 245 50.2
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 1.1e-54 218.4 497 31.0
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.3e-45 186.0 155 65.2
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 6.3e-45 186.0 235 45.1
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.1e-44 185.3 155 64.5
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 1.4e-44 184.9 487 29.0
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 1.2e-43 181.8 278 38.8
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 7.2e-41 172.6 247 39.3
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.4e-20 105.1 220 34.5
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 7.0e-20 102.8 91 50.5
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 1.6e-19 101.7 107 49.5
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 1.0e-18 99.0 821 19.6
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 7.2e-17 92.8 79 63.3
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 1.2e-16 92.0 69 63.8
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 3.6e-16 90.5 78 62.8
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 6.1e-16 89.7 117 41.9
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.6e-08 65.1 64 59.4
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.2e-06 58.9 46 58.7


User provided reference genes

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