Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 2.2e-263 911.8 470 100.0
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 7.5e-203 710.7 472 78.6
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 3.2e-201 705.3 442 82.1
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 9.2e-201 703.7 418 82.3
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 4.6e-200 701.4 413 81.8
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 3.0e-199 698.7 420 81.7
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 9.5e-198 693.7 420 81.9
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 4.7e-197 691.4 422 81.5
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 3.1e-196 688.7 426 77.9
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 3.4e-195 685.3 420 80.7
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 3.4e-195 685.3 450 79.1
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 3.8e-194 681.8 404 83.2
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 4.2e-193 678.3 424 80.0
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 4.2e-193 678.3 422 80.1
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 3.5e-192 675.2 421 78.9
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 1.7e-191 672.9 416 78.8
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 3.0e-191 672.2 420 78.3
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 5.6e-190 667.9 415 78.3
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 5.6e-190 667.9 421 77.7
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 9.6e-190 667.2 406 81.0
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 1.6e-189 666.4 415 77.8
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.6e-189 666.4 418 78.9
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 2.8e-189 665.6 418 78.9
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 2.8e-189 665.6 443 77.7
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 2.8e-189 665.6 462 77.7
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 3.6e-189 665.2 420 77.4
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.1e-188 663.7 418 78.7
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.4e-188 663.3 418 78.7
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 1.4e-188 663.3 423 77.1
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 6.9e-188 661.0 420 77.1
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 6.9e-188 661.0 413 78.0
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 4.4e-187 658.3 417 76.5
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 5.8e-187 657.9 414 77.8
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 3.8e-186 655.2 416 75.5
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 4.9e-186 654.8 418 78.9
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 4.9e-186 654.8 418 78.9
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 7.1e-185 651.0 417 75.3
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 9.3e-185 650.6 418 79.4
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.7e-184 649.0 438 74.7
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 8.7e-183 644.0 411 76.6
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.8e-180 636.3 420 73.6
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 3.4e-179 632.1 420 74.0
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 9.9e-179 630.6 418 73.4
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 1.7e-178 629.8 404 75.5
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 2.7e-176 622.5 400 76.0
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 4.3e-174 615.1 423 73.5
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 1.2e-171 607.1 410 72.7
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 2.6e-171 605.9 419 72.1
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.4e-169 600.1 413 71.9
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 4.6e-168 595.1 423 71.2
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 3.9e-167 592.0 418 69.4
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 7.4e-166 587.8 420 70.0
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 4.8e-165 585.1 420 67.9
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 8.2e-165 584.3 408 69.6
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 2.4e-164 582.8 419 70.4
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 6.9e-164 581.3 410 68.3
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.2e-163 580.5 416 68.0
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 3.4e-163 578.9 408 68.9
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 1.1e-161 573.9 417 66.7
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 4.2e-161 572.0 412 67.2
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 1.2e-160 570.5 447 65.5
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 2.1e-160 569.7 378 74.6
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 3.5e-160 568.9 414 66.2
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 1.8e-159 566.6 422 65.6
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 8.7e-159 564.3 407 69.0
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 1.5e-158 563.5 409 68.2
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 3.3e-158 562.4 402 68.4
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 5.7e-158 561.6 417 65.9
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 7.4e-158 561.2 416 65.4
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.2e-157 559.7 330 82.4
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 2.8e-157 559.3 417 65.7
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 4.8e-157 558.5 417 65.5
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 4.8e-157 558.5 414 65.5
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 1.2e-155 553.9 413 66.8
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 1.5e-155 553.5 401 67.1
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.0e-155 553.1 426 66.4
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 1.7e-154 550.1 404 66.8
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 3.8e-154 548.9 404 66.8
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 5.0e-154 548.5 413 63.9
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 6.5e-154 548.1 421 63.7
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 8.5e-154 547.7 413 63.9
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 9.4e-153 544.3 413 66.8
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 2.7e-152 542.7 407 67.6
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 6.7e-151 538.1 403 65.8
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 2.8e-149 532.7 331 78.5
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 3.7e-149 532.3 458 60.0
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 5.3e-148 528.5 406 64.3
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.2e-147 527.3 456 60.3
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 5.0e-146 521.9 477 56.6
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 2.3e-143 513.1 391 65.0
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 3.9e-143 512.3 330 72.4
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 2.0e-142 510.0 346 70.5
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 5.7e-142 508.4 432 60.0
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 9.1e-140 501.1 346 69.4
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.0e-138 497.7 367 65.4
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.8e-133 479.6 295 78.6
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 8.2e-133 478.0 406 57.9
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 2.9e-130 469.5 426 54.9
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 1.1e-129 467.6 329 70.8
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.6e-120 437.2 311 68.8
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 9.1e-116 421.4 369 57.5
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 4.2e-113 412.5 372 56.2
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 9.5e-113 411.4 413 53.5
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 9.2e-108 394.8 284 70.1
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 1.2e-107 394.4 280 70.0
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.2e-107 394.4 301 69.1
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.1e-100 371.3 335 60.6
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 7.0e-100 368.6 384 49.5
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 7.3e-97 358.6 304 58.6
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 6.2e-96 355.5 293 57.3
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 6.8e-95 352.1 352 50.0
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 9.8e-94 348.2 370 50.8
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 3.3e-89 333.2 245 65.7
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 4.7e-88 329.3 325 55.1
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 3.9e-82 309.7 184 79.3
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 6.6e-82 308.9 219 71.7
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 5.2e-79 299.3 261 56.3
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.4e-76 291.2 333 48.0
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.7e-74 284.3 160 85.0
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.9e-61 240.4 234 50.9
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 6.2e-56 222.6 155 69.7
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 4.5e-54 216.5 123 81.3
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 3.5e-51 206.8 126 77.0
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.3e-49 200.3 144 68.8
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 2.4e-39 167.5 190 52.6
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 9.4e-36 155.6 116 69.8
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.6e-35 153.7 255 35.7
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 4.5e-22 110.2 198 35.4
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.6e-17 94.4 58 75.9
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 1.3e-13 82.0 45 82.2


User provided reference genes

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