Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 1.3e-154 549.7 278 100.0
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 5.4e-108 394.8 277 73.3
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 1.1e-105 387.1 277 70.8
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 6.2e-104 381.3 279 70.3
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 1.2e-99 367.1 277 67.9
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 8.7e-98 360.9 278 67.3
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 8.7e-98 360.9 268 68.7
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 9.6e-97 357.5 279 67.0
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.6e-96 356.7 273 67.0
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 1.8e-95 353.2 276 65.6
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 9.9e-94 347.4 268 66.8
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.4e-92 342.8 277 63.9
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 4.2e-92 342.0 268 67.9
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 7.1e-92 341.3 277 64.3
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 1.6e-91 340.1 279 63.4
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 1.8e-90 336.7 278 61.2
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 3.3e-89 332.4 259 66.4
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 7.4e-89 331.3 280 60.4
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 1.6e-88 330.1 266 61.7
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 4.0e-87 325.5 280 60.0
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.2e-86 323.9 305 56.7
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 2.0e-86 323.2 277 59.9
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 5.8e-86 321.6 261 66.3
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 7.6e-86 321.2 269 63.9
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 1.9e-84 316.6 266 59.4
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 1.9e-84 316.6 259 62.9
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 4.2e-84 315.5 266 64.3
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 1.2e-83 313.9 235 68.5
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 2.1e-83 313.2 269 58.4
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 8.7e-82 307.8 273 59.3
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 1.1e-81 307.4 260 61.5
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 1.6e-80 303.5 263 61.2
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 8.2e-80 301.2 281 58.4
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.1e-79 300.8 278 57.2
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.4e-79 300.4 279 56.6
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 1.8e-79 300.1 277 57.4
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 4.0e-79 298.9 277 58.1
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 3.4e-78 295.8 276 56.5
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 5.8e-78 295.0 276 54.7
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 8.4e-77 291.2 281 56.9
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 2.5e-76 289.7 217 71.0
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 3.2e-76 289.3 279 56.6
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 4.2e-76 288.9 271 57.2
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 9.3e-76 287.7 269 54.6
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 2.7e-75 286.2 279 55.6
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 6.0e-75 285.0 271 56.5
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 7.9e-75 284.6 269 56.1
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 1.3e-74 283.9 278 54.7
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 3.9e-74 282.3 226 65.0
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 3.9e-74 282.3 279 54.8
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 6.7e-74 281.6 278 54.7
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 1.1e-73 280.8 271 53.5
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 2.5e-73 279.6 282 52.1
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 3.3e-73 279.3 279 54.1
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 9.7e-73 277.7 282 51.8
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 1.3e-72 277.3 282 51.8
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.3e-72 277.3 258 59.3
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 3.7e-72 275.8 271 54.2
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 6.3e-72 275.0 272 51.8
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 8.2e-72 274.6 280 54.6
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.4e-71 273.9 271 53.9
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 1.8e-71 273.5 210 68.1
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 9.0e-71 271.2 270 56.7
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.6e-70 269.6 268 52.6
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 2.6e-70 269.6 263 53.6
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 4.5e-70 268.9 278 52.9
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 5.9e-70 268.5 271 52.0
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 1.7e-69 266.9 266 53.8
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 6.5e-69 265.0 273 51.3
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.2e-67 260.8 265 54.0
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 1.8e-66 256.9 191 67.0
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 1.1e-65 254.2 257 53.7
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 5.7e-65 251.9 291 48.5
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 7.4e-65 251.5 272 52.2
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 1.7e-64 250.4 232 57.3
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 4.8e-64 248.8 263 52.5
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.5e-62 243.8 285 48.1
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 5.9e-62 241.9 258 54.7
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 1.9e-60 236.9 270 45.9
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 2.5e-60 236.5 228 57.5
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 6.1e-59 231.9 280 46.8
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 3.0e-58 229.6 237 49.8
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 3.0e-58 229.6 278 47.1
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 6.7e-58 228.4 223 57.4
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.5e-57 227.3 232 51.7
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 9.7e-57 224.6 273 48.7
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 9.7e-57 224.6 232 51.3
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 3.7e-56 222.6 214 55.6
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 9.1e-55 218.0 282 44.7
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.9e-53 213.0 261 46.7
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 7.2e-52 208.4 193 56.5
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 3.5e-46 189.5 176 54.0
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 3.8e-45 186.0 178 52.8
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 5.0e-45 185.7 172 57.6
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 4.4e-41 172.6 141 64.5
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 2.3e-26 123.6 116 53.4
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 2.9e-21 106.7 87 67.8
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 2.2e-16 90.5 281 31.0
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.7e-13 80.9 59 61.0
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.5e-12 77.8 59 59.3
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.2e-09 68.2 59 54.2
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 5.8e-09 65.9 60 51.7
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 8.3e-08 62.0 52 55.8
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 2.4e-07 60.5 90 44.4


User provided reference genes

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