Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI09G0180 Tripterygium wilfordii HOM05D006440 ORTHO05D003987 0.0e+00 1216.8 593 100.0
QL06p016694 Quercus lobata HOM05D006440 ORTHO05D003987 1.3e-292 1009.2 592 80.6
CiPaw.02G114500 Carya illinoinensis HOM05D006440 ORTHO05D003987 1.6e-290 1002.3 593 80.6
Potri.010G073600 Populus trichocarpa HOM05D006440 ORTHO05D003987 7.9e-290 1000.0 593 80.3
Ciclev10004596m.g Citrus clementina HOM05D006440 ORTHO05D003987 1.1e-286 989.6 595 78.5
Manes.03G166900 Manihot esculenta HOM05D006440 ORTHO05D003987 1.1e-286 989.6 593 79.4
Potri.008G165000 Populus trichocarpa HOM05D006440 ORTHO05D003987 2.6e-285 984.9 593 79.6
Gohir.A09G225400 Gossypium hirsutum HOM05D006440 ORTHO05D003987 5.8e-285 983.8 593 78.6
GSVIVG01027730001 Vitis vinifera HOM05D006440 ORTHO05D003987 6.4e-284 980.3 596 79.0
Atru.chr4.2134 Acer truncatum HOM05D006440 ORTHO05D003987 4.6e-282 974.2 596 78.4
Duzib212G0326 Durio zibethinus HOM05D006440 ORTHO05D003987 7.9e-282 973.4 593 77.9
Gohir.D09G227100 Gossypium hirsutum HOM05D006440 ORTHO05D003987 3.3e-280 968.0 593 78.2
Eucgr.H03137 Eucalyptus grandis HOM05D006440 ORTHO05D003987 2.0e-277 958.7 594 77.9
CSS0026181 Camellia sinensis var. sinensis HOM05D006440 ORTHO05D003987 1.4e-275 952.6 597 76.9
CsaV3_3G012320 Cucumis sativus L. HOM05D006440 ORTHO05D003987 1.4e-275 952.6 593 76.2
CANSAT78G1511 Cannabis sativa HOM05D006440 ORTHO05D003987 3.2e-275 951.4 593 76.2
Prupe.1G035000 Prunus persica HOM05D006440 ORTHO05D003987 2.1e-274 948.7 593 76.1
MELO3C006441.2 Cucumis melo HOM05D006440 ORTHO05D003987 7.9e-274 946.8 593 75.7
MD13G1210600 Malus domestica HOM05D006440 ORTHO05D003987 1.9e-272 942.2 593 75.5
COL.COLO4_15832 Corchorus olitorius HOM05D006440 ORTHO05D003987 2.5e-272 941.8 593 75.9
Sabra10G0034700 Salix brachista HOM05D006440 ORTHO05D003987 7.4e-272 940.3 633 73.5
Sed0013572 Sechium edule HOM05D006440 ORTHO05D003987 3.7e-271 937.9 593 75.9
Lalb_Chr02g0150571 Lupinus albus HOM05D006440 ORTHO05D003987 1.1e-270 936.4 593 75.0
TAR365G0504 Trochodendron aralioides HOM05D006440 ORTHO05D003987 2.2e-268 928.7 596 75.0
Nn1g02707 Nelumbo nucifera HOM05D006440 ORTHO05D003987 6.5e-268 927.2 601 74.2
Ca_09816_v3 Cicer arietinum L. HOM05D006440 ORTHO05D003987 1.9e-267 925.6 594 74.2
Medtr1g073920 Medicago truncatula HOM05D006440 ORTHO05D003987 3.9e-265 917.9 595 73.4
Lj5g0005322 Lotus japonicus HOM05D006440 ORTHO05D003987 3.3e-264 914.8 594 74.6
ClCG05G004420 Citrullus lanatus HOM05D006440 ORTHO05D003987 2.2e-263 912.1 632 69.9
RcHm_v2.0_Chr4g0391871 Rosa chinensis HOM05D006440 ORTHO05D003987 3.7e-263 911.4 595 73.9
Rhsim04G0187900 Rhododendron simsii HOM05D006440 ORTHO05D003987 5.3e-262 907.5 630 71.0
FAN17G2886 Fragaria x ananassa HOM05D006440 ORTHO05D003987 6.9e-262 907.1 595 73.8
DCAR_027296 Daucus carota HOM05D006440 ORTHO05D003987 4.5e-261 904.4 596 72.8
Glyma.20G202700 Glycine max HOM05D006440 ORTHO05D003987 1.0e-260 903.3 593 73.2
HanXRQChr13g0418761 Helianthus annuus HOM05D006440 ORTHO05D003987 2.2e-260 902.1 599 72.6
Glyma.10G188100 Glycine max HOM05D006440 ORTHO05D003987 5.5e-259 897.5 593 72.3
Cc03_g05160 Coffea canephora HOM05D006440 ORTHO05D003987 7.2e-259 897.1 603 72.3
VMungo0720G1034 Vigna mungo HOM05D006440 ORTHO05D003987 9.4e-259 896.7 593 73.2
FvH4_4g03210 Fragaria vesca HOM05D006440 ORTHO05D003987 2.1e-258 895.6 595 73.1
Dinv29887 Davidia involucrata HOM05D006440 ORTHO05D003188 6.1e-258 894.0 554 78.7
vmacro08450 Vaccinium macrocarpon HOM05D006440 ORTHO05D003987 1.8e-257 892.5 669 67.3
Gorai.006G249000 Gossypium raimondii HOM05D006440 ORTHO05D003987 8.8e-257 890.2 547 78.4
arahy.Tifrunner.gnm1.ann1.WJ3SQN Arachis hypogaea HOM05D006440 ORTHO05D003987 1.1e-256 889.8 581 74.0
PGR004G0512 Punica granatum HOM05D006440 ORTHO05D003987 1.1e-256 889.8 593 71.5
Sopen09g032600 Solanum pennellii HOM05D006440 ORTHO05D003987 7.4e-256 887.1 593 72.0
Phvul.007G129000 Phaseolus vulgaris HOM05D006440 ORTHO05D003987 1.8e-254 882.5 593 71.8
arahy.Tifrunner.gnm1.ann1.A0C0SS Arachis hypogaea HOM05D006440 ORTHO05D003987 5.9e-253 877.5 592 72.6
SalBow2G2218 Salvia bowleyana HOM05D006440 ORTHO05D003987 1.0e-252 876.7 615 70.4
Migut.G00449 Erythranthe guttata HOM05D006440 ORTHO05D003987 3.2e-251 871.7 595 71.1
CAN.G793.7 Capsicum annuum HOM05D006440 ORTHO05D003987 2.3e-249 865.5 595 70.8
MSTRG.9914 Avicennia marina HOM05D006440 ORTHO05D003987 5.7e-248 860.9 594 71.0
FAN12G1575 Fragaria x ananassa HOM05D006440 ORTHO05D003987 6.3e-247 857.4 595 70.9
FAN22G0224 Fragaria x ananassa HOM05D006440 ORTHO05D003987 6.3e-247 857.4 595 71.1
SGA_v2.0_scaffold88G27269 Striga asiatica HOM05D006440 ORTHO05D003987 5.3e-246 854.4 591 70.9
Aqoxy2G03617 Aquilegia oxysepala HOM05D006440 ORTHO05D003987 1.1e-243 846.7 597 69.7
EL10Ac3g05914 Beta vulgaris HOM05D006440 ORTHO05D003987 1.2e-242 843.2 597 69.8
MBI18_g37356_MAGBIO Magnolia biondii HOM05D006440 ORTHO05D003987 3.6e-242 841.6 646 65.2
ECA240G3037 Erigeron canadensis HOM05D006440 ORTHO05D003987 1.3e-239 833.2 568 69.4
THA.LOC104815988 Tarenaya hassleriana HOM05D006440 ORTHO05D003987 1.7e-239 832.8 593 66.9
Oeu025570.2 Olea europaea HOM05D006440 ORTHO05D000397 1.1e-238 830.1 534 74.3
PSO017G7287 Papaver somniferum HOM05D006440 ORTHO05D003987 1.1e-238 830.1 594 66.5
PSO063G3815 Papaver somniferum HOM05D006440 ORTHO05D003987 4.1e-238 828.2 594 66.2
Manes.15G038500 Manihot esculenta HOM05D006440 ORTHO05D003987 2.0e-237 825.9 585 70.3
Psat6g132960 Pisum sativum HOM05D006440 ORTHO05D003987 3.8e-236 821.6 593 69.1
Lsat_1_v5_gn_3_121341 Lactuca sativa HOM05D006440 ORTHO05D003987 5.5e-235 817.8 595 68.4
Haze_11338 Corylus avellana HOM05D006440 ORTHO05D003987 8.0e-234 813.9 652 64.0
Thhalv10003170m.g Eutrema salsugineum HOM05D006440 ORTHO05D003987 4.4e-232 808.1 595 64.9
Sp2g08350 Schrenkiella parvula HOM05D006440 ORTHO05D003987 3.7e-231 805.1 595 65.2
Ah.07g207430 Amaranthus hybridus HOM05D006440 ORTHO05D003987 1.8e-230 802.7 592 68.1
Solyc09g089660.4 Solanum lycopersicum HOM05D006440 ORTHO05D003987 9.1e-230 800.4 546 71.1
Hund04543 Selenicereus undatus HOM05D006440 ORTHO05D003987 5.0e-228 794.7 595 67.2
AUR62015479 Chenopodium quinoa HOM05D006440 ORTHO05D003987 8.6e-228 793.9 599 67.1
Thecc.04G250600 Theobroma cacao HOM05D006440 ORTHO05D003987 2.8e-226 788.9 593 66.9
Aa31LG5G3660 Aethionema arabicum HOM05D006440 ORTHO05D003987 6.1e-226 787.7 593 64.6
BcaB07g30569 Brassica carinata HOM05D006440 ORTHO05D003987 6.8e-225 784.3 595 63.2
Lj6A660T45 Lonicera japonica HOM05D006440 ORTHO05D003987 2.6e-224 782.3 606 67.3
Peaxi162Scf00024g01821 Petunia axillaris HOM05D006440 ORTHO05D003987 5.7e-224 781.2 528 72.3
C02p44000 Brassica napus HOM05D006440 ORTHO05D003987 2.2e-223 779.2 596 63.8
Sc25g0004030 Simmondsia chinensis HOM05D006440 ORTHO05D003987 1.4e-222 776.5 530 70.4
Actinidia04464 Actinidia chinensis HOM05D006440 ORTHO05D003987 2.4e-222 775.8 518 73.7
BcaC03g16584 Brassica carinata HOM05D006440 ORTHO05D003987 3.1e-222 775.4 598 63.5
BolC2t10447H Brassica oleracea HOM05D006440 ORTHO05D003987 7.0e-222 774.2 596 63.9
AL8G16820 Arabidopsis lyrata HOM05D006440 ORTHO05D003987 5.0e-220 768.1 595 63.0
BraA02t07826Z Brassica rapa HOM05D006440 ORTHO05D003987 4.3e-219 765.0 597 62.6
CDE06G0279 Ceratophyllum demersum HOM05D006440 ORTHO05D003987 1.2e-218 763.5 600 65.0
A02p27870 Brassica napus HOM05D006440 ORTHO05D003987 1.6e-218 763.1 596 62.6
AT5G43500 Arabidopsis thaliana HOM05D006440 ORTHO05D003987 2.8e-218 762.3 595 63.0
AUR62002263 Chenopodium quinoa HOM05D006440 ORTHO05D003987 1.0e-217 760.4 690 58.3
Os04g0177600 Oryza sativa ssp. japonica HOM05D006440 ORTHO05D003987 8.3e-215 750.7 600 61.3
Nitab4.5_0008345g0020 Nicotiana tabacum HOM05D006440 ORTHO05D003987 1.6e-213 746.5 509 70.9
CARHR180120 Cardamine hirsuta HOM05D006440 ORTHO05D003987 7.8e-213 744.2 595 60.7
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 4.3e-211 738.4 484 73.3
unitig_748.g7321 Utricularia gibba HOM05D006440 ORTHO05D003987 9.5e-211 737.3 617 60.9
ATR0680G034 Amborella trichopoda HOM05D006440 ORTHO05D003987 6.2e-210 734.6 578 64.4
Carub.0008s0511 Capsella rubella HOM05D006440 ORTHO05D003987 4.1e-206 721.8 556 63.1
Nitab4.5_0000342g0190 Nicotiana tabacum HOM05D006440 ORTHO05D003987 4.6e-173 612.1 531 59.1
Psat2g067040 Pisum sativum HOM05D006440 ORTHO05D003987 6.5e-159 565.1 379 71.8
HPP92_008424 Vanilla planifolia HOM05D006440 ORTHO05D003987 1.3e-143 514.2 391 64.5
Pp3c3_14850 Physcomitrium patens HOM05D006440 ORTHO05D003987 2.8e-138 496.5 607 45.8
MD16G1213700 Malus domestica HOM05D006440 ORTHO05D003987 1.0e-127 461.5 527 49.3
Mapoly0028s0034 Marchantia polymorpha HOM05D006440 ORTHO05D003987 1.0e-127 461.5 438 53.0
SMO117G0008 Selaginella moellendorffii HOM05D006440 ORTHO05D003987 7.7e-120 435.3 598 41.0
PGSC0003DMG400017256 Solanum tuberosum HOM05D006440 ORTHO05D003987 7.0e-105 385.6 245 75.1
Cpa.g.sc44.85 Carica papaya HOM05D006440 ORTHO05D003987 1.9e-89 334.3 205 79.0
Zm00001eb087470 Zea mays HOM05D006440 ORTHO05D003987 2.1e-88 330.9 291 58.4
Zm00001eb087460 Zea mays HOM05D006440 ORTHO05D003987 1.1e-78 298.5 248 56.0
CBR_g37544 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-72 276.9 617 32.7
HPP92_027995 Vanilla planifolia HOM05D006440 ORTHO05D003987 9.3e-65 252.3 176 65.9
HanXRQChr13g0422471 Helianthus annuus HOM05D006440 ORTHO05D003987 2.6e-43 181.0 162 57.4
HPP92_008423 Vanilla planifolia HOM05D006440 ORTHO05D003987 4.2e-41 173.7 134 61.2
Dinv44661 Davidia involucrata HOM05D006440 ORTHO05D003987 3.8e-34 150.6 110 74.5
SEGI_34555 Sequoiadendron giganteum HOM05D006440 ORTHO05D003987 8.5e-34 149.4 119 57.1
HanXRQChr13g0422461 Helianthus annuus HOM05D006440 ORTHO05D003987 6.3e-29 133.3 81 72.8
Hma1.2p1_1716F.1_g299120 Hydrangea macrophylla HOM05D006440 ORTHO05D003987 1.4e-23 115.5 69 73.9
Cfa026271 Carpinus fangiana HOM05D006440 ORTHO05D003987 6.3e-21 106.7 313 27.2
SHI00694 Sapria himalayana HOM05D006440 ORTHO05D003987 2.0e-19 101.7 100 54.0
SHI00689 Sapria himalayana HOM05D006440 ORTHO05D003987 2.7e-16 91.3 52 84.6
Nn5g28601 Nelumbo nucifera HOM05D006440 ORTHO05D003987 1.6e-11 75.5 55 56.4
MD16G1213300 Malus domestica HOM05D006440 ORTHO05D003987 1.3e-10 72.4 45 66.7
SHI00693 Sapria himalayana HOM05D006440 ORTHO05D003987 1.7e-10 72.0 82 41.5
SHI00691 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-08 65.9 44 68.2
Haze_11337 Corylus avellana HOM05D006440 ORTHO05D003987 5.7e-06 57.0 32 81.2


User provided reference genes

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