Gene: AT5G43500

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G43500
  • Transcript Identifier AT5G43500.2
  • Gene Type Coding gene
  • Location Chr5 : 17469991-17473429 : positive

Gene Family Information

  • ID HOM05D006440
  • #Genes/#Species 124/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G43500.2
  • symbol ARP9
  • Alias ATARP9,actin-related protein 9
  • uniprot Q9LSW2

Descriptions

  • Description actin-related protein 9
  • Computational description actin-related protein 9 (ARP9); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Computational description actin-related protein 9 (ARP9); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006338
IBA
IEA
Gene Ontologychromatin remodeling1
GO:0006338
IEA
InterProchromatin remodeling
GO:0006302
IBA
Gene Ontologydouble-strand break repair1
GO:0006355
IBA
Gene Ontologyregulation of transcription, DNA-templated1
GO:0043044
IBA
GOA DatabaseATP-dependent chromatin remodeling

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0031011
IBA
IEA
Gene OntologyIno80 complex1
GO:0031011
IEA
InterProIno80 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043129 ATPase, nucleotide binding domain
IPR004000 Actin family
IPR027668 Actin-related protein 8/Plant actin-related protein 9
Mapman id Description
35.1 not assigned.annotated