Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 0.0e+00 1323.9 712 100.0
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 1.3e-227 793.5 651 70.2
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 1.4e-213 746.9 651 66.4
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 3.4e-207 725.7 658 64.1
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.3e-198 697.2 637 64.4
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 2.9e-198 696.0 667 59.2
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 9.4e-197 691.0 659 61.5
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 7.9e-196 688.0 660 60.5
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 5.9e-191 671.8 670 59.7
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 8.5e-190 667.9 663 59.7
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 4.2e-189 665.6 666 58.7
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 2.2e-182 643.3 669 58.1
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 1.1e-181 641.0 671 58.0
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 1.8e-168 597.0 659 54.2
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 9.1e-168 594.7 658 54.6
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 2.7e-167 593.2 653 54.8
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 2.3e-166 590.1 653 55.3
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 4.4e-162 575.9 663 51.7
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 9.2e-160 568.2 578 54.2
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 1.2e-159 567.8 664 49.2
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 3.5e-159 566.2 651 51.6
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 5.9e-159 565.5 662 52.1
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 8.6e-158 561.6 659 51.1
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.1e-157 561.2 590 53.9
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 3.3e-157 559.7 649 48.7
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 4.3e-157 559.3 660 48.6
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 2.8e-156 556.6 669 51.6
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 6.1e-156 555.4 658 50.6
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 1.0e-155 554.7 649 48.5
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 3.7e-153 546.2 659 48.4
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 1.1e-152 544.7 661 51.0
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 3.2e-152 543.1 591 52.8
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 5.4e-152 542.3 661 47.0
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 6.0e-151 538.9 581 54.4
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 1.3e-150 537.7 654 48.3
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 3.3e-149 533.1 597 50.6
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 3.3e-149 533.1 653 47.0
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 2.1e-148 530.4 596 50.2
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 2.8e-148 530.0 667 49.0
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 6.2e-148 528.9 565 52.9
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 8.0e-148 528.5 652 48.3
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.4e-147 527.7 576 50.5
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 2.3e-147 526.9 585 50.3
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 2.3e-147 526.9 595 50.1
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 1.5e-146 524.2 577 50.4
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 2.0e-146 523.9 589 50.1
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 2.0e-146 523.9 651 50.2
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 7.5e-146 521.9 574 50.7
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 1.3e-145 521.2 573 51.5
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 1.3e-145 521.2 651 49.9
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.1e-144 518.1 661 49.6
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 1.9e-144 517.3 600 48.8
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.1e-143 513.8 651 47.0
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.7e-143 513.5 661 49.2
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 6.0e-143 512.3 549 51.4
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 1.0e-142 511.5 571 50.1
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 1.3e-142 511.1 586 52.9
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 1.7e-142 510.8 653 46.4
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 5.1e-142 509.2 591 49.7
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 1.9e-141 507.3 424 61.6
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 8.1e-140 501.9 671 44.7
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 1.1e-139 501.5 598 47.2
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 6.8e-139 498.8 592 48.3
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 2.0e-138 497.3 657 44.1
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 2.6e-138 496.9 572 47.6
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 5.8e-138 495.7 576 48.8
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 1.4e-136 491.1 600 49.2
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 1.6e-135 487.6 551 51.5
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 1.6e-135 487.6 436 59.6
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 2.7e-135 486.9 596 49.5
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 3.5e-135 486.5 612 45.8
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 5.1e-134 482.6 603 49.4
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 1.1e-133 481.5 483 57.1
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.1e-133 481.5 570 50.0
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 5.6e-133 479.2 580 52.8
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 2.1e-132 477.2 603 48.6
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 2.1e-132 477.2 591 49.4
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 2.6e-130 470.3 588 45.7
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 4.4e-130 469.5 588 45.4
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 1.7e-129 467.6 592 45.9
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 2.9e-129 466.8 612 48.0
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 4.9e-129 466.1 624 47.0
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 1.1e-128 464.9 594 48.0
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 1.4e-128 464.5 588 44.9
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 3.2e-128 463.4 437 56.5
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 1.0e-126 458.4 598 46.5
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 1.3e-126 458.0 584 45.2
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 3.9e-126 456.4 553 47.9
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 6.6e-126 455.7 574 46.3
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 1.1e-125 454.9 459 53.2
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 1.4e-123 448.0 653 45.8
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 9.0e-123 445.3 521 48.6
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 3.8e-121 439.9 521 52.4
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 1.5e-117 427.9 426 52.1
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 1.6e-116 424.5 613 44.5
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 1.0e-110 405.2 583 42.9
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 6.9e-99 365.9 386 50.8
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 8.2e-92 342.4 608 36.5
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 2.1e-87 327.8 280 57.5
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 7.4e-77 292.7 426 44.8
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 7.4e-77 292.7 426 44.8
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 3.1e-51 207.6 440 33.0
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 2.3e-46 191.4 393 32.1
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 3.6e-31 141.0 160 50.0
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 5.1e-25 120.6 186 39.8
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.2e-21 109.4 134 45.5
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 4.4e-21 107.5 119 49.6
VMungo0464G0544 Vigna mungo HOM05D006787 ORTHO05D008366 2.4e-19 101.7 104 50.0
VMungo0647G0587 Vigna mungo HOM05D006787 ORTHO05D008366 1.2e-18 99.4 104 50.0
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.1e-11 76.3 114 38.6
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 1.9e-11 75.5 209 26.8
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 6.0e-10 70.5 99 40.4
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 3.9e-09 67.8 50 54.0
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 9.6e-08 63.2 86 34.9
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 3.6e-07 61.2 71 39.4
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 2.4e-06 58.5 245 24.9
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 9.0e-06 56.6 278 24.5


User provided reference genes

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