Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 7.6e-64 249.2 124 100.0
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 1.2e-48 198.7 123 78.9
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 1.6e-45 188.3 118 82.2
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 3.1e-41 174.1 127 71.7
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 5.3e-41 173.3 125 70.4
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 6.5e-31 139.8 124 62.1
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 8.4e-31 139.4 123 57.7
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 2.5e-30 137.9 122 59.8
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 3.2e-30 137.5 125 58.4
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 3.2e-30 137.5 125 60.0
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 5.5e-30 136.7 124 56.5
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.6e-29 135.2 124 55.6
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 2.3e-28 131.3 125 55.2
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 3.0e-28 131.0 125 56.0
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 3.9e-28 130.6 124 55.6
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 5.1e-28 130.2 123 54.5
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 6.7e-28 129.8 122 55.7
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 8.7e-28 129.4 124 54.8
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 1.1e-27 129.0 123 55.3
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 1.5e-27 128.6 123 56.1
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 1.9e-27 128.3 125 55.2
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 3.3e-27 127.5 124 55.6
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 3.3e-27 127.5 115 54.8
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 4.3e-27 127.1 124 54.8
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 5.7e-27 126.7 124 53.2
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 5.7e-27 126.7 123 54.5
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 9.6e-27 125.9 121 57.0
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 2.8e-26 124.4 124 55.6
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 4.8e-26 123.6 124 55.6
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 6.3e-26 123.2 122 54.9
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 6.3e-26 123.2 122 52.5
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 6.3e-26 123.2 123 54.5
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 8.2e-26 122.9 123 55.3
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 1.1e-25 122.5 123 53.7
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 1.4e-25 122.1 122 54.1
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 1.8e-25 121.7 123 53.7
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 2.4e-25 121.3 122 53.3
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 3.1e-25 120.9 122 53.3
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.1e-25 120.6 123 50.4
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 4.1e-25 120.6 123 52.8
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 4.1e-25 120.6 123 52.8
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 9.0e-25 119.4 122 54.9
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 9.0e-25 119.4 122 54.9
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.0e-24 118.2 123 49.6
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 5.9e-24 116.7 123 55.3
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 5.9e-24 116.7 122 52.5
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 7.6e-24 116.3 122 52.5
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 7.6e-24 116.3 124 51.6
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 1.3e-23 115.5 123 50.4
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.8e-23 114.0 123 50.4
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.0e-23 113.6 122 50.8
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.0e-23 113.6 122 50.8
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 6.5e-23 113.2 122 50.8
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 6.5e-23 113.2 122 50.8
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 3.2e-22 110.9 112 51.8
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 3.2e-22 110.9 131 49.6
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 7.2e-22 109.8 115 55.7
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 7.2e-22 109.8 123 50.4
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 7.2e-22 109.8 121 49.6
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 7.2e-22 109.8 115 51.3
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 9.3e-22 109.4 115 55.7
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 9.3e-22 109.4 127 48.0
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 3.6e-21 107.5 124 53.2
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 4.6e-21 107.1 134 47.0
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 4.6e-21 107.1 123 51.2
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.0e-20 105.9 118 51.7
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 2.3e-20 104.8 115 53.9
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 3.9e-20 104.0 119 52.9
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 3.9e-20 104.0 119 48.7
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 3.9e-20 104.0 131 48.9
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 5.1e-20 103.6 115 53.0
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 6.7e-20 103.2 72 63.9
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.5e-19 102.1 76 57.9
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 2.5e-19 101.3 128 46.1
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 2.5e-19 101.3 131 46.6
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 2.5e-19 101.3 131 46.6
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 4.3e-19 100.5 119 44.5
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 9.7e-19 99.4 131 45.8
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 3.7e-18 97.4 70 62.9
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 3.7e-18 97.4 125 44.0
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 3.7e-18 97.4 119 47.9
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 4.8e-18 97.1 128 46.9
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 1.5e-16 92.0 123 42.3
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 4.5e-16 90.5 118 46.6
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 5.9e-16 90.1 131 42.0
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 1.3e-15 89.0 136 45.6
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 1.9e-14 85.1 135 42.2
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 4.2e-14 84.0 74 52.7
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 7.2e-14 83.2 134 41.8
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 1.2e-13 82.4 132 41.7
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 1.2e-13 82.4 128 41.4
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.2e-13 82.4 134 38.8
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 3.6e-13 80.9 124 40.3
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 3.6e-13 80.9 124 40.3
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 1.0e-12 79.3 124 39.5
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 1.8e-12 78.6 124 39.5
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 3.0e-12 77.8 135 36.3
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 3.9e-12 77.4 129 40.3
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 4.4e-11 73.9 123 36.6
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 5.7e-11 73.6 124 37.9
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 9.7e-11 72.8 124 36.3
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 2.8e-10 71.2 103 39.8
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 6.3e-10 70.1 44 68.2


User provided reference genes

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