Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 4.4e-112 407.9 198 100.0
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 8.7e-84 313.9 186 85.5
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 9.0e-81 303.9 183 83.1
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 2.4e-78 295.8 196 74.0
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 5.1e-76 288.1 180 79.4
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 5.6e-75 284.6 188 76.6
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 1.3e-74 283.5 183 77.0
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 2.1e-74 282.7 184 76.6
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 8.1e-74 280.8 180 77.2
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.4e-73 280.0 180 77.2
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 2.4e-73 279.3 180 76.7
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 4.0e-73 278.5 180 78.3
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 5.3e-73 278.1 178 77.0
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 5.3e-73 278.1 186 75.8
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.2e-72 276.9 186 75.3
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 1.5e-72 276.6 180 76.1
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.5e-72 276.6 180 76.7
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 4.5e-72 275.0 180 76.7
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 1.3e-71 273.5 180 75.6
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.2e-71 272.7 180 75.0
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 2.9e-71 272.3 191 70.7
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 3.8e-71 271.9 180 75.6
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.4e-70 270.0 180 75.6
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 3.2e-70 268.9 180 75.0
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 4.2e-70 268.5 187 71.7
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 5.5e-70 268.1 172 76.2
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 9.3e-70 267.3 181 75.1
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 3.5e-69 265.4 176 73.3
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 4.6e-69 265.0 180 75.0
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 4.6e-69 265.0 180 75.0
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 6.0e-69 264.6 194 68.6
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 6.0e-69 264.6 180 74.4
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 6.0e-69 264.6 180 74.4
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 7.9e-69 264.2 185 70.8
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 7.9e-69 264.2 185 70.8
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 2.3e-68 262.7 184 71.2
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.0e-68 262.3 180 74.4
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 3.9e-68 261.9 176 73.9
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 3.9e-68 261.9 180 72.2
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 5.1e-68 261.5 180 71.1
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 5.1e-68 261.5 200 67.0
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.9e-67 259.6 180 72.2
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 2.5e-67 259.2 184 71.2
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 4.3e-67 258.5 180 71.7
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 4.3e-67 258.5 176 72.2
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 7.4e-67 257.7 174 72.4
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.6e-66 256.5 183 71.6
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 1.6e-66 256.5 207 65.7
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 2.8e-66 255.8 177 72.9
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 2.8e-66 255.8 181 71.8
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 2.8e-66 255.8 180 70.6
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 6.2e-66 254.6 171 74.3
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 1.4e-65 253.4 176 72.7
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 1.4e-65 253.4 172 72.1
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 6.9e-65 251.1 179 70.9
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 9.0e-65 250.8 171 73.7
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 9.0e-65 250.8 180 68.9
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 9.0e-65 250.8 180 68.9
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.2e-64 250.4 174 71.8
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.6e-64 249.2 184 68.5
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 4.5e-64 248.4 188 66.5
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 5.8e-64 248.1 179 69.3
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 7.6e-64 247.7 172 70.3
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 7.6e-64 247.7 178 70.2
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 1.3e-63 246.9 176 70.5
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 4.9e-63 245.0 176 68.8
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 8.4e-63 244.2 190 64.2
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 1.1e-62 243.8 174 70.7
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.5e-62 242.7 173 70.5
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 3.2e-62 242.3 176 66.5
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.7e-61 239.2 171 69.6
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 7.9e-61 237.7 172 69.2
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 7.9e-61 237.7 172 69.2
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 7.9e-61 237.7 172 69.2
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.0e-60 237.3 171 68.4
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.0e-60 237.3 171 68.4
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 3.0e-60 235.7 172 68.6
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 3.9e-60 235.3 182 65.9
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.1e-59 233.8 179 62.0
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 1.9e-59 233.0 169 68.6
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 1.9e-59 233.0 169 68.6
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 2.5e-59 232.6 169 68.6
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 5.7e-59 231.5 173 68.2
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 7.4e-59 231.1 173 67.1
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 9.6e-59 230.7 174 66.1
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 9.6e-59 230.7 173 67.6
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 4.8e-58 228.4 171 67.3
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 9.0e-57 224.2 151 72.8
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 9.3e-54 214.2 208 55.8
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 6.1e-53 211.5 192 59.9
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 6.1e-53 211.5 180 61.7
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 2.3e-52 209.5 173 59.0
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 8.2e-50 201.1 181 56.4
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.8e-49 199.9 169 59.2
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 4.1e-49 198.7 191 57.6
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 3.4e-48 195.7 170 58.8
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 5.9e-48 194.9 150 68.0
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 7.7e-48 194.5 127 77.2
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 1.7e-47 193.4 183 59.0
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 5.5e-46 188.3 132 68.2
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 6.3e-42 174.9 125 66.4
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 2.0e-40 169.9 160 54.4
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 5.0e-39 165.2 126 66.7
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 4.7e-37 158.7 127 63.8
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 8.8e-36 154.5 122 63.9
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.1e-33 147.5 122 61.5
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.8e-33 146.7 91 79.1
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 3.1e-33 146.0 122 59.8
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 7.0e-33 144.8 95 76.8
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.2e-32 144.1 94 77.7
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 2.9e-31 139.4 110 63.6
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 2.5e-30 136.3 186 43.0
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 2.1e-29 133.3 186 41.4
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 7.0e-17 91.7 160 36.2
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 6.5e-15 85.1 59 67.8
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.5e-14 83.2 51 80.4
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 8.0e-13 78.2 173 28.9
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 1.0e-12 77.8 170 27.6
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 8.3e-10 68.2 198 24.2
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.1e-09 67.8 72 51.4


User provided reference genes

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