Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 1.6e-219 765.8 370 100.0
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 2.8e-192 675.2 371 88.4
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 4.4e-190 667.9 367 88.3
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.6e-187 659.4 370 86.8
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 4.6e-187 657.9 367 86.6
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 4.6e-187 657.9 367 86.6
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 1.7e-186 656.0 371 86.3
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 1.6e-184 649.4 363 86.5
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 3.6e-184 648.3 362 85.4
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 1.8e-183 646.0 366 85.5
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 6.4e-181 637.5 366 83.9
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.4e-180 635.6 366 83.6
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 3.2e-180 635.2 367 83.7
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 5.4e-180 634.4 366 85.2
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 3.5e-179 631.7 359 85.2
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 2.3e-178 629.0 361 82.8
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 3.0e-178 628.6 362 83.1
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 1.9e-177 625.9 366 82.0
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 4.3e-177 624.8 361 82.5
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 5.6e-177 624.4 356 82.9
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 9.6e-177 623.6 360 82.2
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 2.1e-176 622.5 364 82.7
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 2.1e-176 622.5 364 82.7
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 2.1e-176 622.5 360 81.9
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.6e-176 621.7 358 81.8
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.7e-176 621.3 358 82.7
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 4.7e-176 621.3 358 82.7
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 8.1e-176 620.5 358 81.6
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 1.4e-175 619.8 360 81.9
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 1.8e-175 619.4 366 82.2
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 2.4e-175 619.0 363 81.5
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 2.4e-175 619.0 360 81.7
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 5.2e-175 617.8 363 82.6
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 5.2e-175 617.8 360 81.7
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 8.9e-175 617.1 358 82.1
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 1.2e-174 616.7 360 81.9
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 1.2e-174 616.7 357 82.6
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 1.5e-174 616.3 363 82.6
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 2.0e-174 615.9 360 81.9
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 2.6e-174 615.5 359 81.9
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 3.4e-174 615.1 358 82.4
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 3.4e-174 615.1 358 82.4
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 4.4e-174 614.8 361 82.0
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 7.6e-174 614.0 359 81.9
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 9.9e-174 613.6 359 81.9
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 9.9e-174 613.6 356 81.5
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.3e-173 613.2 360 81.4
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.3e-173 613.2 360 81.1
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 1.3e-173 613.2 359 81.6
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.7e-173 612.8 359 80.8
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 1.7e-173 612.8 360 80.8
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 4.9e-173 611.3 358 81.3
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 6.4e-173 610.9 381 78.7
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 8.4e-173 610.5 358 82.4
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 1.1e-172 610.1 374 79.4
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.9e-172 609.4 356 81.2
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 2.4e-172 609.0 358 80.4
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 3.2e-172 608.6 360 78.6
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 5.4e-172 607.8 359 80.8
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 1.6e-171 606.3 366 79.0
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 1.6e-171 606.3 359 79.4
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 1.6e-171 606.3 364 78.8
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 2.7e-171 605.5 359 79.7
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 2.7e-171 605.5 362 79.8
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 4.6e-171 604.7 369 79.1
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.6e-171 604.7 362 79.8
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 6.0e-171 604.4 359 79.7
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 6.0e-171 604.4 360 80.3
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 6.0e-171 604.4 359 79.7
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 1.0e-170 603.6 360 81.1
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 1.3e-170 603.2 360 81.1
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 2.3e-170 602.4 367 78.2
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 2.3e-170 602.4 367 79.3
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 8.7e-170 600.5 356 80.9
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 2.5e-169 599.0 370 78.1
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 3.3e-169 598.6 359 78.8
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 3.3e-169 598.6 355 80.6
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 3.3e-169 598.6 366 77.9
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 2.1e-168 595.9 360 78.6
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 2.1e-168 595.9 358 79.1
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 8.1e-168 594.0 362 79.0
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 1.4e-167 593.2 360 78.1
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 3.1e-167 592.0 356 79.8
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 1.2e-166 590.1 367 79.0
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 5.8e-166 587.8 366 77.6
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 1.7e-165 586.3 367 77.1
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 1.7e-165 586.3 366 77.6
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.9e-165 584.7 369 76.4
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 8.4e-165 583.9 356 77.2
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 8.4e-165 583.9 364 75.8
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 1.4e-164 583.2 384 74.0
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 3.2e-164 582.0 377 73.7
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.5e-163 578.6 372 75.8
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 4.6e-163 578.2 366 77.0
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 7.8e-163 577.4 373 75.3
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.3e-162 576.6 342 78.7
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 5.1e-162 574.7 379 73.6
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 8.7e-162 573.9 360 76.7
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 2.5e-161 572.4 356 78.4
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 6.2e-160 567.8 371 74.7
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 2.6e-158 562.4 351 76.4
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 3.4e-158 562.0 365 73.4
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 7.6e-158 560.8 365 72.9
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 1.7e-157 559.7 364 72.5
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 1.9e-156 556.2 381 72.2
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 5.4e-156 554.7 357 74.5
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 1.2e-155 553.5 363 73.0
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 5.6e-153 544.7 360 74.2
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 9.6e-153 543.9 360 74.4
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 3.7e-152 542.0 360 74.7
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.8e-151 539.7 358 72.9
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.6e-150 535.8 361 72.6
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.0e-149 533.9 357 71.7
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.2e-149 532.7 360 72.8
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 6.0e-147 524.6 360 71.7
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.3e-146 523.5 359 69.4
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.8e-146 523.1 360 71.1
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 3.0e-146 522.3 354 73.4
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 3.9e-146 521.9 355 69.9
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 5.1e-146 521.5 353 69.4
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 4.3e-145 518.5 297 83.8
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 5.3e-143 511.5 367 70.0
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.2e-142 510.4 334 71.3
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 1.2e-142 510.4 371 69.0
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.0e-141 507.3 359 69.9
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 8.4e-141 504.2 431 60.3
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 3.5e-139 498.8 280 84.3
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.0e-133 480.7 365 64.1
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 1.4e-130 470.3 337 66.2
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.5e-129 466.8 293 76.1
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.3e-128 463.8 349 63.9
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 9.1e-127 457.6 365 63.3
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 1.4e-124 450.3 240 88.3
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 4.2e-124 448.7 337 61.7
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 9.4e-124 447.6 319 66.5
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 1.2e-118 430.6 714 38.4
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 3.5e-110 402.5 268 72.8
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 1.1e-108 397.5 373 53.9
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 5.4e-103 378.6 237 74.3
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.2e-97 360.9 340 57.4
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 7.7e-94 348.2 221 74.2
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 2.1e-91 340.1 253 64.4
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.6e-91 339.3 334 53.0
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 4.7e-83 312.4 315 54.6
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 6.8e-82 308.5 203 73.9
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 3.0e-45 186.8 117 79.5
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 1.1e-44 184.9 125 72.8
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 1.5e-44 184.5 125 72.0
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 1.9e-44 184.1 136 67.6
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 1.9e-44 184.1 101 90.1
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 1.9e-44 184.1 125 72.0
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.7e-40 171.0 114 71.1
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.2e-40 170.6 97 87.6
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 4.9e-40 169.5 125 69.6
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 8.4e-40 168.7 172 50.0
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 2.1e-38 164.1 129 65.9
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.6e-35 154.5 99 72.7
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 3.2e-31 140.2 124 61.3
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.0e-29 133.7 112 60.7
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 1.5e-25 121.3 69 79.7
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.3e-24 118.2 64 87.5
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 9.3e-23 112.1 65 81.5
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 2.7e-22 110.5 71 74.6
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 7.4e-20 102.4 71 63.4
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.4e-18 97.4 61 72.1
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 5.0e-16 89.7 84 54.8
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 5.1e-13 79.7 124 42.7
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 6.7e-13 79.3 49 69.4
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 1.7e-11 74.7 66 56.1
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 2.9e-08 63.9 41 75.6


User provided reference genes

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