Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9089 Trifolium pratense HOM05D000169 ORTHO05D410610 1.4e-31 139.0 71 100.0
Medtr5g027480 Medicago truncatula HOM05D000169 ORTHO05D000542 5.8e-14 80.5 53 79.2
TPR.G9094 Trifolium pratense HOM05D000169 ORTHO05D000542 5.8e-14 80.5 53 77.4
TPR.G29418 Trifolium pratense HOM05D000169 ORTHO05D000542 1.7e-13 79.0 66 62.1
Medtr4g077900 Medicago truncatula HOM05D000169 ORTHO05D000542 3.7e-13 77.8 53 73.6
Psat7g170480 Pisum sativum HOM05D000169 ORTHO05D000542 1.1e-12 76.3 53 71.7
Ca_25150_v3 Cicer arietinum L. HOM05D000169 ORTHO05D000542 3.2e-12 74.7 52 71.2
Medtr5g027500 Medicago truncatula HOM05D000169 ORTHO05D000542 1.0e-10 69.7 53 64.2
Lj2g0008706 Lotus japonicus HOM05D000169 ORTHO05D000542 3.9e-10 67.8 57 61.4
Hma1.2p1_1137F.1_g260670 Hydrangea macrophylla HOM05D000169 ORTHO05D000542 5.6e-09 63.9 56 51.8
Rhsim07G0135800 Rhododendron simsii HOM05D000169 ORTHO05D000542 7.3e-09 63.5 56 53.6
VMungo1215G0115 Vigna mungo HOM05D000169 ORTHO05D000542 9.5e-09 63.2 56 55.4
Dinv06900 Davidia involucrata HOM05D000169 ORTHO05D000542 2.1e-08 62.0 56 50.0
Lalb_Chr09g0325321 Lupinus albus HOM05D000169 ORTHO05D000542 2.1e-08 62.0 52 61.5
arahy.Tifrunner.gnm1.ann1.C7I9DN Arachis hypogaea HOM05D000169 ORTHO05D000542 2.8e-08 61.6 57 54.4
arahy.Tifrunner.gnm1.ann1.RX4FVN Arachis hypogaea HOM05D000169 ORTHO05D000542 2.8e-08 61.6 57 54.4
Hma1.2p1_0803F.1_g220670 Hydrangea macrophylla HOM05D000169 ORTHO05D000542 3.6e-08 61.2 56 50.0
Dinv06899 Davidia involucrata HOM05D000169 ORTHO05D000542 8.1e-08 60.1 56 46.4
QL12p000370 Quercus lobata HOM05D000169 ORTHO05D000542 8.1e-08 60.1 70 45.7
Glyma.01G010000 Glycine max HOM05D000169 ORTHO05D000542 1.1e-07 59.7 53 54.7
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 1.1e-07 59.7 53 52.8
Potri.003G099700 Populus trichocarpa HOM05D000169 ORTHO05D000542 1.8e-07 58.9 53 52.8
Sc05g0005340 Simmondsia chinensis HOM05D000169 ORTHO05D000542 1.8e-07 58.9 55 49.1
Actinidia14764 Actinidia chinensis HOM05D000169 ORTHO05D000542 2.4e-07 58.5 58 44.8
Actinidia24586 Actinidia chinensis HOM05D000169 ORTHO05D000542 2.4e-07 58.5 58 44.8
CiPaw.11G101200 Carya illinoinensis HOM05D000169 ORTHO05D000542 2.4e-07 58.5 56 53.6
MSTRG.25706 Avicennia marina HOM05D000169 ORTHO05D000542 3.1e-07 58.2 58 48.3
CANSAT21G0066 Cannabis sativa HOM05D000169 ORTHO05D000542 3.1e-07 58.2 67 47.8
Cc08_g03990 Coffea canephora HOM05D000169 ORTHO05D000542 3.1e-07 58.2 57 47.4
CSS0036213 Camellia sinensis var. sinensis HOM05D000169 ORTHO05D000542 4.0e-07 57.8 53 50.9
AUR62007375 Chenopodium quinoa HOM05D000169 ORTHO05D000542 4.0e-07 57.8 60 50.0
FvH4_5g23550 Fragaria vesca HOM05D000169 ORTHO05D000542 4.0e-07 57.8 57 47.4
FAN04G0621 Fragaria x ananassa HOM05D000169 ORTHO05D000542 4.0e-07 57.8 57 47.4
FAN18G0947 Fragaria x ananassa HOM05D000169 ORTHO05D000542 4.0e-07 57.8 57 47.4
FAN18G1529 Fragaria x ananassa HOM05D000169 ORTHO05D000542 4.0e-07 57.8 57 47.4
Solyc08g076300.3 Solanum lycopersicum HOM05D000169 ORTHO05D000542 4.0e-07 57.8 56 48.2
Sopen08g024910 Solanum pennellii HOM05D000169 ORTHO05D000542 4.0e-07 57.8 56 48.2
FAN08G3297 Fragaria x ananassa HOM05D000169 ORTHO05D000542 6.8e-07 57.0 57 45.6
Phvul.002G132900 Phaseolus vulgaris HOM05D000169 ORTHO05D000542 6.8e-07 57.0 52 55.8
EL10Ac5g11983 Beta vulgaris HOM05D000169 ORTHO05D000542 8.9e-07 56.6 63 47.6
FAN13G2859 Fragaria x ananassa HOM05D000169 ORTHO05D000542 8.9e-07 56.6 57 45.6
vmacro14216 Vaccinium macrocarpon HOM05D000169 ORTHO05D000542 8.9e-07 56.6 58 48.3
CAN.G773.15 Capsicum annuum HOM05D000169 ORTHO05D000542 1.5e-06 55.8 53 52.8
Haze_08108 Corylus avellana HOM05D000169 ORTHO05D000542 2.0e-06 55.5 53 50.9
MD14G1050700 Malus domestica HOM05D000169 ORTHO05D000542 2.0e-06 55.5 68 48.5
RcHm_v2.0_Chr7g0212861 Rosa chinensis HOM05D000169 ORTHO05D000542 2.0e-06 55.5 56 46.4
Dinv29030 Davidia involucrata HOM05D000321 ORTHO05D000204 2.6e-06 55.1 53 49.1
Cfa012553 Carpinus fangiana HOM05D000169 ORTHO05D000542 3.4e-06 54.7 53 49.1
Ciclev10000735m.g Citrus clementina HOM05D000169 ORTHO05D000542 3.4e-06 54.7 56 48.2
HanXRQChr13g0404791 Helianthus annuus HOM05D000169 ORTHO05D000542 4.4e-06 54.3 56 41.1
SGA_v2.0_scaffold96G29049 Striga asiatica HOM05D001165 ORTHO05D001347 4.4e-06 54.3 53 49.1
Thhalv10024787m.g Eutrema salsugineum HOM05D000169 ORTHO05D000542 5.8e-06 53.9 53 47.2
PGSC0003DMG401009291 Solanum tuberosum HOM05D000169 ORTHO05D000542 5.8e-06 53.9 56 46.4
COL.COLO4_16895 Corchorus olitorius HOM05D000169 ORTHO05D000542 7.6e-06 53.5 53 47.2
HanXRQChr03g0082071 Helianthus annuus HOM05D000169 ORTHO05D000542 7.6e-06 53.5 56 46.4
Thecc.03G314100 Theobroma cacao HOM05D000169 ORTHO05D000542 7.6e-06 53.5 53 49.1
ECA240G0966 Erigeron canadensis HOM05D000169 ORTHO05D000542 9.9e-06 53.1 61 41.0
TWI60G0407 Tripterygium wilfordii HOM05D000169 ORTHO05D000542 9.9e-06 53.1 53 45.3


User provided reference genes

Program Settings