Gene: COL.COLO4_16895

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_16895
  • Transcript Identifier COL.rna15659
  • Gene Type Coding gene
  • Location AWUE01016262.1 : 210054-212868 : positive

Gene Family Information

  • ID HOM05D000169
  • #Genes/#Species 2209/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna15659
  • GenBank OMO93463.1
  • id gene16867
  • gene_name COLO4_16895
  • uniprot A0A1R3JF70

Descriptions

  • Description AMP-dependent synthetase/ligase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT4G19010
GO:0006744
ISO
PLAZA Integrative Orthologyubiquinone biosynthetic process AT4G19010

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016874
IEA
GOA Databaseligase activity
GO:0016405
ISO
PLAZA Integrative OrthologyCoA-ligase activity AT4G19010

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT4G19010

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042099 ANL, N-terminal domain
IPR000873 AMP-dependent synthetase/ligase
IPR025110 AMP-binding enzyme, C-terminal domain
Mapman id Description
35.1 not assigned.annotated