Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 4.5e-169 597.8 294 100.0
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.5e-161 572.8 294 93.9
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.4e-159 566.2 295 94.6
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 1.3e-157 559.7 294 93.2
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 4.2e-151 538.1 294 89.1
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 1.0e-149 533.5 293 88.7
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 5.1e-149 531.2 293 86.0
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 1.1e-148 530.0 298 88.9
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 5.7e-148 527.7 292 85.3
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 1.0e-141 506.9 294 83.3
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 3.1e-138 495.4 293 78.2
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 4.1e-138 495.0 293 79.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 6.9e-138 494.2 294 78.2
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.2e-137 493.4 293 79.2
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 3.4e-137 491.9 292 79.1
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 3.4e-137 491.9 293 78.2
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 5.9e-137 491.1 294 77.9
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.3e-136 490.0 293 78.8
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.7e-136 489.6 291 78.0
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 2.9e-136 488.8 294 76.5
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.9e-136 488.8 293 78.2
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 8.5e-136 487.3 291 78.4
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 8.5e-136 487.3 294 77.9
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 4.2e-135 485.0 294 77.2
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.5e-135 484.6 292 76.0
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.5e-135 484.6 292 76.0
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 5.5e-135 484.6 291 76.6
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 7.2e-135 484.2 294 76.5
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.2e-135 484.2 292 76.0
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.2e-134 483.4 292 76.0
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.6e-134 483.0 292 75.7
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 1.6e-134 483.0 294 77.2
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 2.7e-134 482.3 293 76.5
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.6e-134 481.9 293 76.1
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 3.6e-134 481.9 294 75.9
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 3.6e-134 481.9 293 76.5
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 4.7e-134 481.5 294 77.2
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 7.9e-134 480.7 294 75.9
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 1.4e-133 479.9 290 76.9
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 2.3e-133 479.2 293 75.8
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 3.0e-133 478.8 292 76.0
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.0e-133 478.8 293 75.8
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 5.1e-133 478.0 292 76.0
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.1e-132 476.9 293 75.8
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.1e-132 476.9 294 76.5
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.1e-132 476.9 294 76.9
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 1.5e-132 476.5 294 75.9
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 2.0e-132 476.1 295 76.9
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 2.6e-132 475.7 293 75.4
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 3.3e-132 475.3 288 77.4
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 4.4e-132 474.9 294 76.5
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 4.4e-132 474.9 293 75.1
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 2.8e-131 472.2 294 76.2
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 4.8e-131 471.5 310 72.6
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 1.8e-130 469.5 294 75.2
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 3.1e-130 468.8 293 73.0
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 3.1e-130 468.8 293 75.4
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 5.3e-130 468.0 294 75.9
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 9.1e-130 467.2 294 74.8
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.2e-129 466.8 309 72.2
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 1.2e-129 466.8 294 72.8
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.6e-129 466.5 276 79.0
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 2.6e-129 465.7 294 73.8
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 4.5e-129 464.9 305 72.8
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 3.2e-127 458.8 292 71.9
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 3.2e-127 458.8 291 74.6
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 2.1e-126 456.1 294 71.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 2.7e-126 455.7 342 64.9
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 1.0e-125 453.8 294 71.4
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 1.0e-125 453.8 320 69.4
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 2.3e-125 452.6 290 72.8
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 2.3e-125 452.6 290 72.8
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 2.3e-125 452.6 290 72.8
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 2.3e-125 452.6 290 72.8
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 3.0e-125 452.2 294 71.4
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 3.0e-125 452.2 290 72.8
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 4.0e-125 451.8 293 71.7
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 8.8e-125 450.7 294 70.7
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 1.5e-124 449.9 294 71.8
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.4e-124 448.4 290 73.1
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.3e-123 446.8 293 72.7
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 8.2e-123 444.1 293 69.3
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 8.2e-123 444.1 292 71.2
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.2e-121 440.3 328 66.2
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 3.5e-121 438.7 315 67.0
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.0e-120 437.2 260 78.8
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 3.2e-119 432.2 293 67.9
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 4.0e-117 425.2 289 68.9
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 6.8e-117 424.5 294 66.7
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 1.5e-116 423.3 261 73.9
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.7e-115 419.9 291 69.4
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.6e-110 403.3 294 66.3
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 4.0e-109 398.7 292 64.7
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 4.1e-98 362.1 216 77.8
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 4.6e-97 358.6 192 89.6
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 2.5e-95 352.8 287 57.8
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 3.4e-92 342.4 289 55.0
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 7.5e-92 341.3 289 58.1
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 9.8e-92 340.9 282 58.9
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 8.3e-91 337.8 201 78.1
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 4.1e-90 335.5 195 77.4
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.7e-72 276.9 187 70.6
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.3e-67 260.8 161 75.2
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 2.2e-67 260.0 258 50.8
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 8.4e-59 231.5 154 69.5
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 5.1e-56 222.2 147 70.1
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 2.3e-48 196.8 147 66.7
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.4e-45 186.8 142 65.5
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 5.9e-36 155.6 109 71.6
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 2.5e-34 150.2 100 74.0
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 3.3e-31 139.8 73 90.4
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.7e-27 127.5 77 79.2
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.4e-26 124.4 332 26.2
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 1.6e-25 120.9 76 76.3
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.1e-25 120.6 113 54.0
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.4e-23 112.8 67 76.1
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 3.7e-22 109.8 290 26.6
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 6.3e-22 109.0 324 27.8
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 6.1e-09 65.9 41 78.0


User provided reference genes

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