Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7301 Trifolium pratense HOM05D003169 ORTHO05D003700 2.5e-26 121.3 61 100.0
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 1.9e-21 105.1 55 96.4
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 1.0e-19 99.4 55 89.1
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 1.3e-19 99.0 55 87.3
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 3.0e-19 97.8 55 89.1
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 2.8e-17 91.3 55 80.0
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 2.8e-17 91.3 55 81.8
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 2.8e-17 91.3 55 81.8
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 3.7e-17 90.9 55 78.2
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 6.3e-17 90.1 55 78.2
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 6.3e-17 90.1 55 83.6
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 1.1e-16 89.4 55 74.5
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 1.1e-16 89.4 55 74.5
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 1.4e-16 89.0 55 74.5
QL04p010784 Quercus lobata HOM05D003169 ORTHO05D003700 1.4e-16 89.0 55 74.5
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 1.4e-16 89.0 55 74.5
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 1.8e-16 88.6 55 72.7
TPR.G39754 Trifolium pratense HOM05D003169 ORTHO05D003700 1.8e-16 88.6 55 81.8
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 2.4e-16 88.2 55 74.5
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 2.4e-16 88.2 55 76.4
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 2.4e-16 88.2 55 74.5
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 2.4e-16 88.2 55 74.5
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 2.4e-16 88.2 55 72.7
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 74.5
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 76.4
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 76.4
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 76.4
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 76.4
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 78.2
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 78.2
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 76.4
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 72.7
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 3.1e-16 87.8 55 72.7
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 4.1e-16 87.4 55 74.5
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 5.3e-16 87.0 55 69.1
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 5.3e-16 87.0 55 69.1
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 5.3e-16 87.0 55 76.4
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 5.3e-16 87.0 55 76.4
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 5.3e-16 87.0 55 76.4
Cpa.g.sc32.147 Carica papaya HOM05D003169 ORTHO05D003700 6.9e-16 86.7 55 70.9
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 6.9e-16 86.7 55 74.5
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 9.0e-16 86.3 55 74.5
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 9.0e-16 86.3 55 72.7
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 9.0e-16 86.3 55 74.5
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 1.2e-15 85.9 55 76.4
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 1.2e-15 85.9 55 76.4
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 1.5e-15 85.5 55 72.7
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 1.5e-15 85.5 55 69.1
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 2.0e-15 85.1 55 69.1
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 2.0e-15 85.1 55 70.9
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 2.0e-15 85.1 55 69.1
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 2.6e-15 84.7 55 67.3
COL.COLO4_25001 Corchorus olitorius HOM05D003169 ORTHO05D003700 2.6e-15 84.7 55 67.3
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 2.6e-15 84.7 55 67.3
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 2.6e-15 84.7 55 67.3
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 2.6e-15 84.7 55 67.3
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 2.6e-15 84.7 55 67.3
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 2.6e-15 84.7 55 70.9
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 3.4e-15 84.3 55 69.1
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 4.5e-15 84.0 55 69.1
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 4.5e-15 84.0 55 69.1
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 4.5e-15 84.0 55 70.9
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 5.9e-15 83.6 55 69.1
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 5.9e-15 83.6 55 70.9
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 5.9e-15 83.6 55 70.9
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 7.7e-15 83.2 55 67.3
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 7.7e-15 83.2 55 69.1
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 7.7e-15 83.2 55 69.1
TPR.G19390 Trifolium pratense HOM05D003169 ORTHO05D003700 7.7e-15 83.2 55 76.4
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 1.0e-14 82.8 55 70.9
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 1.0e-14 82.8 55 67.3
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 1.0e-14 82.8 55 67.3
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 1.3e-14 82.4 55 67.3
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 1.3e-14 82.4 55 69.1
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 1.7e-14 82.0 55 67.3
Oeu029455.1 Olea europaea HOM05D003169 ORTHO05D003700 1.7e-14 82.0 55 69.1
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 2.2e-14 81.6 55 61.8
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 2.2e-14 81.6 55 67.3
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 2.2e-14 81.6 55 69.1
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 2.2e-14 81.6 55 69.1
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 2.2e-14 81.6 55 65.5
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 2.2e-14 81.6 55 65.5
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 2.9e-14 81.3 55 67.3
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 2.9e-14 81.3 55 67.3
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 5.0e-14 80.5 55 61.8
Lj2A8G61 Lonicera japonica HOM05D003169 ORTHO05D003700 5.0e-14 80.5 55 65.5
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 6.5e-14 80.1 55 67.3
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 6.5e-14 80.1 55 69.1
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 6.5e-14 80.1 55 67.3
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 8.5e-14 79.7 55 63.6
Rhsim06G0106300 Rhododendron simsii HOM05D003169 ORTHO05D003700 8.5e-14 79.7 55 63.6
HanXRQChr13g0408911 Helianthus annuus HOM05D003169 ORTHO05D003700 1.1e-13 79.3 55 67.3
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 1.1e-13 79.3 55 67.3
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 1.4e-13 79.0 55 65.5
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 1.9e-13 78.6 55 65.5
Oeu032680.1 Olea europaea HOM05D003169 ORTHO05D003700 1.9e-13 78.6 55 65.5
Hund20128 Selenicereus undatus HOM05D003169 ORTHO05D003700 1.9e-13 78.6 55 63.6
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 1.9e-13 78.6 51 68.6
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 2.5e-13 78.2 55 69.1
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 3.2e-13 77.8 55 63.6
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 4.2e-13 77.4 55 63.6
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 4.2e-13 77.4 55 63.6
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 4.2e-13 77.4 55 63.6
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 4.2e-13 77.4 55 63.6
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 5.5e-13 77.0 55 63.6
BcaB02g08681 Brassica carinata HOM05D003169 ORTHO05D003700 5.5e-13 77.0 55 63.6
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 5.5e-13 77.0 55 63.6
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 5.5e-13 77.0 55 63.6
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 5.5e-13 77.0 55 63.6
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 5.5e-13 77.0 55 63.6
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 5.5e-13 77.0 55 63.6
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 5.5e-13 77.0 55 60.0
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 7.2e-13 76.6 55 63.6
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 1.2e-12 75.9 55 63.6
SEGI_09386 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 1.6e-12 75.5 55 65.5
Peaxi162Scf00166g00077 Petunia axillaris HOM05D003169 ORTHO05D003700 2.1e-12 75.1 55 63.6
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 2.1e-12 75.1 55 60.0
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 2.7e-12 74.7 55 61.8
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 2.7e-12 74.7 55 58.2
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 6.1e-12 73.6 55 60.0
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 1.8e-11 72.0 55 58.2
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 2.3e-11 71.6 55 60.0
TPR.G40025 Trifolium pratense HOM05D003169 ORTHO05D003700 2.3e-11 71.6 39 94.9
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 6.7e-11 70.1 55 52.7
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 8.8e-11 69.7 55 63.6
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 8.8e-11 69.7 55 60.0
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 2.0e-10 68.6 42 78.6
SMO358G0497 Selaginella moellendorffii HOM05D003169 ORTHO05D003700 9.7e-10 66.2 55 56.4
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 1.3e-09 65.9 55 54.5
SEGI_25392 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 6.3e-09 63.5 55 58.2
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 4.1e-08 60.8 55 52.7
TPR.G14822 Trifolium pratense HOM05D003169 ORTHO05D003700 6.9e-08 60.1 45 66.7
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 1.0e-06 56.2 55 50.9


User provided reference genes

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