Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 7.7e-115 417.2 210 100.0
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 1.0e-103 380.2 210 91.0
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 1.5e-102 376.3 210 91.0
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 1.3e-90 336.7 191 89.0
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 8.3e-85 317.4 210 75.7
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 5.6e-81 304.7 217 72.4
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 5.4e-76 288.1 210 67.6
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 8.1e-72 274.2 210 65.2
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 3.1e-71 272.3 210 64.8
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 8.9e-71 270.8 210 64.3
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 8.9e-63 244.2 225 57.3
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.7e-61 240.0 225 56.4
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 2.2e-61 239.6 228 57.5
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 3.8e-61 238.8 225 55.6
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 4.9e-61 238.4 225 56.0
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 1.4e-60 236.9 228 55.3
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 1.9e-60 236.5 225 53.8
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 3.2e-60 235.7 223 55.2
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 1.6e-59 233.4 228 53.9
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.7e-59 232.6 223 53.4
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 3.5e-59 232.3 227 54.6
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 3.9e-58 228.8 225 54.2
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 8.7e-58 227.6 217 53.9
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 4.3e-57 225.3 248 49.6
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 4.3e-57 225.3 223 52.9
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 9.6e-57 224.2 214 57.5
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 1.6e-56 223.4 214 55.1
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 3.6e-56 222.2 225 54.7
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 4.8e-56 221.9 222 51.8
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 1.8e-55 219.9 212 55.7
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 2.4e-55 219.5 222 52.7
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 2.4e-55 219.5 218 54.1
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 4.0e-55 218.8 217 55.3
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 5.3e-55 218.4 214 55.6
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 6.9e-55 218.0 224 53.1
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 1.2e-54 217.2 216 55.1
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 1.2e-54 217.2 214 52.8
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 2.6e-54 216.1 223 51.6
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 1.7e-53 213.4 185 58.9
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 2.2e-53 213.0 226 50.4
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 2.9e-53 212.6 227 52.0
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 4.9e-53 211.8 214 55.1
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 8.4e-53 211.1 225 51.1
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 8.4e-53 211.1 217 53.5
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 1.1e-52 210.7 229 48.0
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 1.1e-52 210.7 224 50.0
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 1.4e-52 210.3 191 57.6
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 1.4e-52 210.3 222 49.1
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 4.2e-52 208.8 214 53.3
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 4.2e-52 208.8 206 51.9
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 7.1e-52 208.0 227 50.2
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 9.3e-52 207.6 202 52.5
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 2.1e-51 206.5 180 58.9
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 3.5e-51 205.7 223 48.4
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 6.0e-51 204.9 214 53.3
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 6.0e-51 204.9 223 48.4
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 6.0e-51 204.9 223 48.4
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 7.8e-51 204.5 223 50.2
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 3.0e-50 202.6 210 51.9
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 5.1e-50 201.8 227 48.0
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 6.6e-50 201.4 194 55.2
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 6.6e-50 201.4 186 58.1
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 8.7e-50 201.1 224 50.4
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 7.3e-49 198.0 197 52.8
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 7.3e-49 198.0 197 51.8
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 9.6e-49 197.6 197 52.3
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 1.3e-48 197.2 197 52.3
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.6e-48 196.8 208 51.4
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.6e-48 196.8 227 45.8
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.1e-48 196.4 227 45.8
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.8e-48 196.1 250 44.0
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 3.6e-48 195.7 147 70.1
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 4.8e-48 195.3 211 51.7
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 3.1e-47 192.6 215 48.8
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 9.0e-47 191.0 227 44.5
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 1.5e-46 190.3 227 45.8
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 2.6e-46 189.5 132 75.0
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 4.5e-46 188.7 207 48.8
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 1.1e-44 184.1 207 49.3
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 1.9e-44 183.3 199 50.8
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 1.9e-44 183.3 163 56.4
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 2.1e-43 179.9 178 55.6
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 8.7e-42 174.5 180 51.7
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 1.9e-41 173.3 202 47.5
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 4.3e-41 172.2 180 51.7
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 1.3e-40 170.6 167 55.1
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 1.8e-39 166.8 166 51.2
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 2.4e-39 166.4 221 42.5
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.5e-38 163.7 200 46.0
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 3.4e-38 162.5 223 42.2
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 7.1e-36 154.8 220 41.8
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 1.6e-35 153.7 191 44.0
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 1.6e-35 153.7 170 48.8
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.5e-35 152.5 166 49.4
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 3.8e-29 132.5 91 73.6
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 4.2e-28 129.0 143 51.7
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 4.8e-16 89.0 84 53.6
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 2.3e-10 70.1 191 28.3
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 5.9e-06 55.5 64 46.9


User provided reference genes

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