Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 1.1e-264 916.0 433 100.0
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 1.2e-223 779.6 415 88.2
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 8.7e-222 773.5 415 89.2
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 2.0e-213 745.7 411 85.6
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 2.9e-209 731.9 414 83.6
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 1.0e-198 696.8 415 79.8
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 1.5e-197 693.0 410 79.8
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 2.6e-194 682.2 375 85.9
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 3.6e-191 671.8 415 77.8
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 5.0e-177 624.8 402 74.4
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 5.5e-176 621.3 425 70.4
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 7.0e-171 604.4 397 68.8
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 1.6e-170 603.2 365 74.5
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 3.5e-170 602.1 419 67.1
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 7.8e-170 600.9 361 76.2
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 2.3e-169 599.4 382 71.7
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 1.1e-168 597.0 382 72.0
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 1.5e-168 596.7 386 70.7
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 2.5e-168 595.9 395 69.4
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 2.5e-168 595.9 382 71.5
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 2.5e-168 595.9 364 73.4
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 4.3e-168 595.1 431 66.4
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 2.8e-167 592.4 385 71.4
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 3.6e-167 592.0 365 73.4
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 1.0e-166 590.5 390 69.7
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 3.1e-166 589.0 367 72.2
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 5.2e-166 588.2 498 59.6
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 6.8e-166 587.8 420 65.2
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 2.0e-165 586.3 384 70.1
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 2.6e-165 585.9 385 69.9
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 4.4e-165 585.1 396 67.9
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 1.3e-164 583.6 421 65.8
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 1.3e-164 583.6 364 71.7
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 1.3e-164 583.6 364 71.7
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 2.9e-164 582.4 404 66.1
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 2.9e-164 582.4 393 69.0
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 3.7e-164 582.0 434 62.4
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 3.7e-164 582.0 425 63.5
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 4.1e-163 578.6 396 67.2
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 4.1e-163 578.6 413 65.1
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 5.4e-163 578.2 393 69.0
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 9.2e-163 577.4 393 67.4
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 7.8e-162 574.3 398 66.1
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.0e-161 573.9 393 68.4
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 3.0e-161 572.4 396 66.7
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.0e-161 572.4 393 67.9
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 3.0e-161 572.4 365 69.0
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 1.5e-160 570.1 398 65.1
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 7.3e-160 567.8 410 63.7
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 1.6e-159 566.6 385 66.8
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 2.8e-159 565.8 402 64.7
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 4.7e-159 565.1 379 70.2
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 3.1e-158 562.4 400 64.5
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 6.8e-158 561.2 377 66.6
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 1.5e-157 560.1 405 63.7
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 4.4e-157 558.5 372 66.7
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 7.5e-157 557.8 347 73.8
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 9.8e-157 557.4 410 63.7
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 3.7e-156 555.4 398 63.6
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 1.4e-155 553.5 388 66.2
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 1.9e-155 553.1 399 66.4
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.6e-154 550.1 387 63.6
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 2.1e-154 549.7 408 63.7
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 7.8e-154 547.7 291 86.3
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 1.3e-153 547.0 370 66.2
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 3.0e-153 545.8 394 64.2
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 1.9e-152 543.1 388 65.2
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 1.9e-152 543.1 391 65.2
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 4.3e-152 542.0 395 64.1
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 1.6e-151 540.0 366 66.7
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 1.6e-151 540.0 378 64.8
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 2.8e-151 539.3 389 64.0
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 2.8e-151 539.3 389 64.0
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 6.2e-151 538.1 368 66.6
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 1.1e-150 537.3 372 66.4
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 1.1e-150 537.3 368 67.1
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 1.4e-150 537.0 373 64.9
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 1.8e-150 536.6 369 66.4
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 3.1e-150 535.8 386 64.5
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 4.0e-150 535.4 389 65.3
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 4.0e-150 535.4 364 67.6
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 6.8e-150 534.6 366 66.4
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 4.4e-149 531.9 366 65.6
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 5.8e-149 531.6 366 66.4
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 7.5e-149 531.2 391 63.2
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 1.3e-148 530.4 367 65.9
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 4.9e-148 528.5 328 74.1
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 4.1e-147 525.4 418 58.4
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 8.6e-145 517.7 387 65.1
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 4.7e-143 511.9 395 59.5
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 2.7e-138 496.1 365 60.8
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 2.7e-138 496.1 404 58.9
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 3.1e-134 482.6 335 65.1
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 5.8e-133 478.4 368 58.7
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 3.8e-132 475.7 306 68.3
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 1.6e-130 470.3 412 54.1
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 3.8e-124 449.1 307 66.1
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 1.4e-123 447.2 417 52.0
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 4.2e-123 445.7 366 53.3
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 9.3e-123 444.5 366 53.8
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 3.9e-121 439.1 319 63.6
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 1.3e-103 380.9 367 47.7
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 2.0e-101 373.6 281 64.8
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 1.3e-100 370.9 226 74.8
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 5.5e-99 365.5 259 66.4
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 2.7e-90 336.7 366 46.7
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 1.4e-81 307.8 404 42.6
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 8.8e-81 305.1 186 76.3
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.3e-76 291.2 354 47.7
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 7.5e-72 275.4 260 54.6
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 8.0e-58 228.8 467 31.7
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 5.0e-52 209.5 194 51.5
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 1.0e-49 201.8 235 41.3
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 2.0e-45 187.6 102 80.4
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 2.7e-45 187.2 129 62.8
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 3.8e-23 113.6 72 66.7
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 1.1e-22 112.1 204 33.3
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 3.5e-21 107.1 59 81.4
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 2.3e-20 104.4 90 57.8
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 7.3e-19 99.4 61 75.4
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 1.6e-18 98.2 61 72.1
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 7.1e-14 82.8 63 58.7
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 2.1e-13 81.3 43 79.1
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 1.1e-11 75.5 51 66.7
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 4.8e-10 70.1 71 49.3
Gohir.A06G077600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 6.4e-07 59.7 71 49.3


User provided reference genes

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