Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 2.3e-287 991.5 478 100.0
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 3.6e-269 931.0 478 93.3
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 4.9e-266 920.6 505 89.1
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 2.7e-264 914.8 478 91.4
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 1.0e-263 912.9 479 91.4
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 5.2e-260 900.6 478 89.5
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 9.9e-259 896.3 478 89.5
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 1.7e-258 895.6 478 89.3
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 8.6e-255 883.2 478 88.3
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 1.1e-254 882.9 478 89.1
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 5.4e-249 864.0 476 86.6
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 1.0e-247 859.8 476 86.1
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 1.1e-246 856.3 478 85.6
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 2.5e-246 855.1 476 85.3
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 2.4e-244 848.6 480 84.4
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 6.9e-244 847.0 478 84.3
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 9.0e-244 846.7 478 83.7
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 1.2e-243 846.3 478 84.3
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 1.5e-243 845.9 503 83.1
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 2.6e-243 845.1 482 84.9
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 5.8e-243 844.0 479 83.5
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 1.3e-242 842.8 476 84.7
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 2.2e-242 842.0 476 83.0
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 2.9e-242 841.6 481 84.0
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 2.9e-242 841.6 481 84.0
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 3.8e-242 841.3 476 83.4
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 3.8e-242 841.3 481 83.8
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 4.9e-242 840.9 475 83.8
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 4.9e-242 840.9 479 83.1
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 8.4e-242 840.1 480 83.3
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 1.4e-241 839.3 479 83.7
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 1.4e-241 839.3 481 83.6
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 7.1e-241 837.0 478 82.6
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 1.6e-240 835.9 486 82.9
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 2.7e-240 835.1 479 82.9
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 1.3e-239 832.8 480 82.7
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 1.7e-239 832.4 478 81.8
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 2.3e-239 832.0 478 82.4
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 2.3e-239 832.0 478 81.6
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 3.9e-239 831.2 484 82.6
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 3.9e-239 831.2 478 82.0
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 8.7e-239 830.1 477 82.4
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 1.5e-238 829.3 472 83.3
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 1.9e-238 828.9 479 81.8
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 2.5e-238 828.6 482 81.3
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 2.5e-238 828.6 484 82.4
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 2.5e-238 828.6 479 81.8
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 4.3e-238 827.8 478 81.2
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 4.3e-238 827.8 478 81.8
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 7.3e-238 827.0 480 82.3
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 7.3e-238 827.0 480 82.3
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 9.6e-238 826.6 480 82.7
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 1.6e-237 825.9 479 82.0
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 2.1e-237 825.5 478 81.6
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 2.8e-237 825.1 478 80.8
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 2.8e-237 825.1 479 81.8
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 3.6e-237 824.7 478 81.4
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 3.6e-237 824.7 477 82.2
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 4.8e-237 824.3 478 80.8
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 6.2e-237 823.9 478 81.8
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 8.1e-237 823.5 478 81.0
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 1.1e-236 823.2 480 82.7
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 1.4e-236 822.8 478 81.2
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 1.4e-236 822.8 478 81.0
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 1.4e-236 822.8 477 81.8
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 2.4e-236 822.0 479 82.5
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 3.1e-236 821.6 477 82.6
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 3.1e-236 821.6 478 81.4
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 6.9e-236 820.5 479 81.2
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 6.9e-236 820.5 478 81.8
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 9.0e-236 820.1 479 81.8
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 1.2e-235 819.7 471 82.0
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 1.2e-235 819.7 478 81.0
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 7.6e-235 817.0 476 82.4
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 1.7e-234 815.8 479 81.2
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 2.2e-234 815.5 486 79.8
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 6.4e-234 813.9 479 82.3
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 6.4e-234 813.9 478 82.4
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 8.4e-234 813.5 486 81.3
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 7.1e-233 810.4 445 86.3
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 1.2e-232 809.7 479 80.0
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 1.6e-232 809.3 443 86.0
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 2.1e-232 808.9 460 83.3
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 3.5e-232 808.1 494 77.7
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 2.3e-231 805.4 478 82.0
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 3.9e-231 804.7 480 80.2
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 6.7e-231 803.9 480 78.5
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 1.1e-230 803.1 479 80.2
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 1.5e-230 802.7 473 82.0
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 2.5e-230 802.0 479 79.3
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 4.3e-230 801.2 486 78.0
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 5.6e-230 800.8 478 82.0
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 2.8e-229 798.5 478 79.7
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 4.0e-228 794.7 476 80.9
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 1.2e-227 793.1 461 80.3
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 7.6e-227 790.4 456 80.9
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 1.3e-226 789.6 473 80.5
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.4e-225 786.2 491 77.4
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 4.2e-225 784.6 473 79.9
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 1.5e-222 776.2 481 78.8
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.1e-220 770.0 476 77.1
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.2e-216 756.5 498 73.5
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 1.5e-214 749.6 477 77.4
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 1.1e-209 733.4 506 72.3
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 3.6e-208 728.4 455 78.7
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 8.8e-207 723.8 481 73.8
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 1.1e-201 706.8 496 72.4
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 1.4e-199 699.9 468 70.1
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 3.7e-197 691.8 473 70.4
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 1.0e-194 683.7 448 71.9
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 1.3e-194 683.3 451 71.2
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 5.0e-194 681.4 428 76.4
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 7.7e-187 657.5 483 69.2
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 7.5e-182 641.0 461 69.6
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 1.2e-174 617.1 364 78.8
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 6.3e-173 611.3 367 77.9
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 3.8e-170 602.1 458 67.2
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 9.8e-166 587.4 480 63.5
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea HOM05D004186 ORTHO05D006965 6.2e-152 541.6 281 93.6
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea HOM05D004186 ORTHO05D006965 6.8e-151 538.1 275 94.5
SalBow6G1169 Salvia bowleyana HOM05D004186 ORTHO05D006965 3.2e-148 529.3 335 78.2
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.4e-140 503.8 304 76.6
MCO08G279 Micromonas commoda HOM05D004186 ORTHO05D006965 3.6e-136 489.2 412 60.4
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 5.8e-134 481.9 304 74.7
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 1.6e-131 473.8 423 54.8
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 2.5e-121 439.9 306 69.9
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 9.9e-118 427.9 308 67.5
TWI34G1113 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 1.1e-105 387.9 211 87.2
SEGI_15575 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 1.7e-101 374.0 228 77.6
SEGI_36533 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 1.7e-101 374.0 228 77.6
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 2.2e-101 373.6 254 69.3
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 3.6e-99 366.3 416 48.3
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 4.6e-91 339.3 463 44.3
MD13G1264900 Malus domestica HOM05D004186 ORTHO05D006965 3.7e-88 329.7 200 79.0
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 1.0e-77 295.0 427 42.4
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 5.7e-73 279.3 179 70.4
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 3.7e-72 276.6 179 69.8
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 5.3e-71 272.7 173 74.6
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 2.7e-70 270.4 173 74.0
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 2.2e-69 267.3 147 82.3
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 2.4e-47 194.1 118 74.6
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 2.4e-47 194.1 118 74.6
A02p08340 Brassica napus HOM05D004186 ORTHO05D006965 1.1e-44 185.3 111 77.5
SMO181G0029 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 3.5e-38 163.7 105 74.3
HanXRQChr09g0269751 Helianthus annuus HOM05D004186 ORTHO05D015971 3.3e-36 157.1 97 77.3
FAN17G2491 Fragaria x ananassa HOM05D004186 ORTHO05D006965 4.3e-36 156.8 95 81.1
RcHm_v2.0_Chr5g0046871 Rosa chinensis HOM05D004186 ORTHO05D015971 1.0e-29 135.6 77 79.2
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 4.7e-27 126.7 79 73.4
RcHm_v2.0_Chr5g0036521 Rosa chinensis HOM05D004186 ORTHO05D015971 4.0e-26 123.6 77 75.3
Ah.08g214930 Amaranthus hybridus HOM05D004186 ORTHO05D061406 1.0e-21 109.0 135 43.7
Zm00001eb265380 Zea mays HOM05D004186 ORTHO05D008381 1.2e-19 102.1 56 78.6
Zm00001eb101000 Zea mays HOM05D004186 ORTHO05D000030 3.6e-19 100.5 65 67.7
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 2.6e-17 94.4 75 57.3
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 2.9e-16 90.9 72 65.3
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 2.9e-16 90.9 72 65.3
SalBow7G3706 Salvia bowleyana HOM05D004186 ORTHO05D352404 1.9e-15 88.2 73 64.4
Sc14g0005990 Simmondsia chinensis HOM05D004186 ORTHO05D039000 7.1e-15 86.3 45 84.4
EL10Ac2g04384 Beta vulgaris HOM05D004186 ORTHO05D039000 1.1e-10 72.4 34 91.2
Lsat_1_v5_gn_9_37000 Lactuca sativa HOM05D004186 ORTHO05D011383 1.5e-09 68.6 58 56.9
BcaC01g06364 Brassica carinata HOM05D004186 ORTHO05D011383 3.4e-09 67.4 81 43.2
C08p17140 Brassica napus HOM05D004186 ORTHO05D011383 3.4e-09 67.4 55 52.7
BolC8t49341H Brassica oleracea HOM05D004186 ORTHO05D011383 3.4e-09 67.4 55 52.7
C03p16540 Brassica napus HOM05D004186 ORTHO05D011383 5.8e-09 66.6 85 40.0
SGA_v2.0_scaffold66G22476 Striga asiatica HOM05D004186 ORTHO05D405288 5.8e-09 66.6 34 91.2
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 7.6e-09 66.2 37 86.5
C07p46470 Brassica napus HOM05D001159 ORTHO05D011383 6.4e-08 63.2 55 50.9
BcaC07g38783 Brassica carinata HOM05D002592 ORTHO05D011383 8.4e-08 62.8 48 54.2
BcaC05g27566 Brassica carinata HOM05D001159 ORTHO05D011383 9.3e-07 59.3 55 49.1
C05p35490 Brassica napus HOM05D001159 ORTHO05D011383 9.3e-07 59.3 55 49.1
BcaC01g06358 Brassica carinata HOM05D004186 ORTHO05D011383 1.2e-06 58.9 58 48.3
C09p03000 Brassica napus HOM05D001159 ORTHO05D011383 1.2e-06 58.9 55 47.3
BolC9t53230H Brassica oleracea HOM05D001159 ORTHO05D011383 1.2e-06 58.9 55 47.3
BolC7t45165H Brassica oleracea HOM05D001159 ORTHO05D011383 2.1e-06 58.2 55 49.1
arahy.Tifrunner.gnm1.ann1.E22CU6 Arachis hypogaea HOM05D001714 ORTHO05D084687 3.5e-06 57.4 39 69.2


User provided reference genes

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