Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G51 Trifolium pratense HOM05D002270 ORTHO05D002866 3.5e-77 291.6 149 100.0
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 1.6e-74 282.7 149 94.0
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 1.2e-72 276.6 149 94.0
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.5e-72 276.2 149 92.6
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 1.4e-70 269.6 149 90.6
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 3.1e-70 268.5 149 91.9
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 1.0e-68 263.5 149 89.9
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 6.5e-68 260.8 149 87.2
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 9.5e-67 256.9 149 85.9
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 1.6e-66 256.1 149 85.2
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 1.6e-66 256.1 149 87.9
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 1.6e-66 256.1 149 85.9
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 3.6e-66 255.0 149 87.2
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 3.6e-66 255.0 149 85.9
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 4.7e-66 254.6 149 84.6
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 1.0e-65 253.4 149 84.6
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 1.0e-65 253.4 149 85.2
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 1.8e-65 252.7 149 83.9
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 4.0e-65 251.5 149 83.9
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.0e-65 251.5 149 83.9
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.0e-65 251.5 149 83.9
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.0e-65 251.5 149 83.9
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 8.9e-65 250.4 149 84.6
Hma1.2p1_0291F.1_g115290 Hydrangea macrophylla HOM05D002270 ORTHO05D002866 1.2e-64 250.0 149 83.2
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 2.0e-64 249.2 149 83.2
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 3.4e-64 248.4 149 83.2
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 4.4e-64 248.1 150 84.7
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 4.4e-64 248.1 149 83.2
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 5.7e-64 247.7 149 81.9
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 7.5e-64 247.3 149 83.2
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.3e-63 246.5 149 82.6
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 2.2e-63 245.7 149 82.6
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 2.8e-63 245.4 149 81.9
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 4.9e-63 244.6 149 80.5
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 8.3e-63 243.8 149 81.9
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.4e-62 243.0 149 83.2
COL.COLO4_12564 Corchorus olitorius HOM05D002270 ORTHO05D002866 1.4e-62 243.0 149 81.2
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 1.4e-62 243.0 149 80.5
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 2.4e-62 242.3 149 81.2
TAR636G2258 Trochodendron aralioides HOM05D002270 ORTHO05D002866 2.4e-62 242.3 149 81.2
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 4.1e-62 241.5 149 79.9
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 4.1e-62 241.5 149 79.9
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 5.4e-62 241.1 149 81.2
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 7.0e-62 240.7 149 82.6
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 1.6e-61 239.6 149 81.9
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 2.0e-61 239.2 149 81.2
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 2.0e-61 239.2 149 79.2
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 3.5e-61 238.4 149 80.5
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 4.5e-61 238.0 149 80.5
Eucgr.J02835 Eucalyptus grandis HOM05D002270 ORTHO05D002866 5.9e-61 237.7 149 81.2
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 5.9e-61 237.7 149 78.5
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 1.0e-60 236.9 149 80.5
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 1.0e-60 236.9 149 81.2
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 1.7e-60 236.1 149 78.5
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 3.8e-60 235.0 149 77.9
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 5.0e-60 234.6 149 77.2
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 8.6e-60 233.8 149 77.2
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 2.5e-59 232.3 150 78.7
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 7.3e-59 230.7 149 76.5
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 9.5e-59 230.3 149 77.9
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 9.5e-59 230.3 149 77.2
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.2e-58 229.9 149 77.2
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 1.2e-58 229.9 149 77.2
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 2.1e-58 229.2 150 76.7
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 3.6e-58 228.4 149 76.5
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 4.7e-58 228.0 149 76.5
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 4.7e-58 228.0 149 74.5
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 8.0e-58 227.3 149 76.5
CDE12G0817 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 1.4e-57 226.5 149 73.8
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 1.4e-57 226.5 149 76.5
Sed0006033 Sechium edule HOM05D002270 ORTHO05D002866 2.3e-57 225.7 149 77.9
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 5.2e-57 224.6 149 75.2
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 5.2e-57 224.6 150 76.0
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 6.8e-57 224.2 149 75.2
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 2.0e-56 222.6 149 77.2
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 4.4e-56 221.5 149 71.1
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 4.4e-56 221.5 149 74.5
FAN09G1018 Fragaria x ananassa HOM05D002270 ORTHO05D002866 7.5e-56 220.7 133 84.2
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.3e-55 219.9 150 73.3
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.7e-55 219.5 150 72.7
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 3.7e-55 218.4 150 71.3
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 8.3e-55 217.2 149 74.5
VMungo1080G1592 Vigna mungo HOM05D002270 ORTHO05D002866 2.4e-54 215.7 160 74.4
Os10g0456900 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 2.7e-53 212.2 149 69.8
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 6.0e-53 211.1 188 61.7
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 7.8e-53 210.7 149 70.5
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 1.0e-52 210.3 150 69.3
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 1.3e-52 209.9 149 72.5
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 1.1e-51 206.8 149 67.1
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 7.3e-51 204.1 149 69.1
SEGI_29020 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.6e-50 203.0 149 65.1
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 2.1e-50 202.6 149 65.1
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.3e-49 199.1 149 67.1
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.6e-48 195.7 149 67.1
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 3.4e-48 195.3 149 62.4
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 4.4e-48 194.9 149 68.5
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 5.8e-48 194.5 149 67.1
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 5.8e-48 194.5 149 67.1
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 5.8e-48 194.5 149 67.1
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 9.8e-48 193.7 149 67.8
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 1.3e-47 193.4 149 67.1
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 2.2e-47 192.6 149 66.4
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 3.7e-47 191.8 149 66.4
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 4.9e-47 191.4 149 65.8
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 6.4e-47 191.0 149 65.8
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 1.1e-46 190.3 149 65.8
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 3.2e-46 188.7 149 66.4
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 2.7e-45 185.7 149 64.4
CBR_g741 Chara braunii HOM05D002270 ORTHO05D002866 1.7e-44 183.0 149 57.0
SEGI_24649 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 3.9e-44 181.8 132 66.7
QL03p018747 Quercus lobata HOM05D002270 ORTHO05D002866 8.6e-44 180.6 149 65.8
BcaB03g13736 Brassica carinata HOM05D002270 ORTHO05D002866 9.5e-43 177.2 149 63.1
SEGI_09123 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.2e-42 176.8 132 65.9
Medtr8g019250 Medicago truncatula HOM05D002270 ORTHO05D002866 1.8e-33 146.4 81 88.9
MCO14G006 Micromonas commoda HOM05D002270 ORTHO05D002866 5.1e-28 128.3 158 42.4
BcaC07g41079 Brassica carinata HOM05D002270 ORTHO05D002866 1.5e-27 126.7 112 58.9
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 4.3e-27 125.2 147 46.3
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 9.6e-27 124.0 152 42.8
Aqoxy6G02932 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.3e-23 113.6 72 79.2
SMO141G0084 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 2.2e-23 112.8 81 63.0
QL05p008929 Quercus lobata HOM05D002270 ORTHO05D338108 3.3e-11 72.4 92 46.7
BolC8t51649H Brassica oleracea HOM05D002270 ORTHO05D002866 1.4e-06 57.0 63 49.2


User provided reference genes

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