Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G421 Trifolium pratense HOM05D003133 ORTHO05D003642 3.3e-53 211.5 108 100.0
TPR.G30225 Trifolium pratense HOM05D003133 ORTHO05D003642 7.6e-34 147.1 81 87.7
Sabra01G0079200 Salix brachista HOM05D003133 ORTHO05D003642 3.7e-28 128.3 108 59.3
Actinidia14558 Actinidia chinensis HOM05D003133 ORTHO05D003642 8.2e-28 127.1 87 70.1
Medtr8g098350 Medicago truncatula HOM05D003133 ORTHO05D003642 8.2e-28 127.1 108 59.3
TPR.G12862 Trifolium pratense HOM05D003133 ORTHO05D003642 8.2e-28 127.1 108 59.3
Ca_17536_v3 Cicer arietinum L. HOM05D003133 ORTHO05D003642 3.1e-27 125.2 108 58.3
Psat7g033480 Pisum sativum HOM05D003133 ORTHO05D003642 3.1e-27 125.2 108 57.4
Potri.001G104500 Populus trichocarpa HOM05D003133 ORTHO05D003642 5.3e-27 124.4 108 58.3
Duzib084G0978 Durio zibethinus HOM05D003133 ORTHO05D003642 6.9e-27 124.0 108 58.3
Gohir.D09G186600 Gossypium hirsutum HOM05D003133 ORTHO05D003642 6.9e-27 124.0 108 58.3
Gorai.006G209400 Gossypium raimondii HOM05D003133 ORTHO05D003642 6.9e-27 124.0 108 58.3
Sabra03G0090000 Salix brachista HOM05D003133 ORTHO05D003642 6.9e-27 124.0 108 58.3
AL7G30380 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 9.1e-27 123.6 108 57.4
AT4G23100 Arabidopsis thaliana HOM05D003133 ORTHO05D003642 9.1e-27 123.6 108 57.4
arahy.Tifrunner.gnm1.ann1.W25JQA Arachis hypogaea HOM05D003133 ORTHO05D003642 9.1e-27 123.6 108 57.4
BcaNung03247 Brassica carinata HOM05D003133 ORTHO05D003642 1.2e-26 123.2 108 56.5
A03p54030 Brassica napus HOM05D003133 ORTHO05D003642 1.2e-26 123.2 108 56.5
C07p52450 Brassica napus HOM05D003133 ORTHO05D003642 1.2e-26 123.2 108 56.5
BraA03t14471Z Brassica rapa HOM05D003133 ORTHO05D003642 1.2e-26 123.2 108 56.5
CARHR230180 Cardamine hirsuta HOM05D003133 ORTHO05D003642 1.2e-26 123.2 108 56.5
CiPaw.11G135600 Carya illinoinensis HOM05D003133 ORTHO05D003642 1.2e-26 123.2 108 57.4
Thhalv10024916m.g Eutrema salsugineum HOM05D003133 ORTHO05D003642 1.2e-26 123.2 108 56.5
Lj4g0013021 Lotus japonicus HOM05D003133 ORTHO05D003642 1.2e-26 123.2 108 57.4
BcaB03g11757 Brassica carinata HOM05D003133 ORTHO05D003642 2.0e-26 122.5 107 57.0
Gohir.A09G192401 Gossypium hirsutum HOM05D003133 ORTHO05D003642 2.0e-26 122.5 108 57.4
arahy.Tifrunner.gnm1.ann1.WBB0SP Arachis hypogaea HOM05D003133 ORTHO05D003642 2.6e-26 122.1 108 56.5
Nn1g01499 Nelumbo nucifera HOM05D003133 ORTHO05D003642 2.6e-26 122.1 108 57.4
PSO017G2538 Papaver somniferum HOM05D003133 ORTHO05D003642 2.6e-26 122.1 108 56.5
PSO063G0727 Papaver somniferum HOM05D003133 ORTHO05D003642 2.6e-26 122.1 108 56.5
BcaNung01474 Brassica carinata HOM05D003133 ORTHO05D003642 3.4e-26 121.7 108 55.6
BolC7t45742H Brassica oleracea HOM05D003133 ORTHO05D003642 3.4e-26 121.7 108 55.6
CiPaw.12G093500 Carya illinoinensis HOM05D003133 ORTHO05D003642 3.4e-26 121.7 108 56.5
Glyma.05G207600 Glycine max HOM05D003133 ORTHO05D003642 3.4e-26 121.7 108 56.5
THA.LOC104806388 Tarenaya hassleriana HOM05D003133 ORTHO05D003642 3.4e-26 121.7 108 56.5
Zm00001eb264980 Zea mays HOM05D003133 ORTHO05D003642 3.4e-26 121.7 108 57.4
Ah.12g056970 Amaranthus hybridus HOM05D003133 ORTHO05D003642 4.5e-26 121.3 108 55.6
CANSAT21G0409 Cannabis sativa HOM05D003133 ORTHO05D003642 4.5e-26 121.3 108 56.5
Lalb_Chr05g0224791 Lupinus albus HOM05D003133 ORTHO05D003642 4.5e-26 121.3 108 55.6
Phvul.002G289200 Phaseolus vulgaris HOM05D003133 ORTHO05D003642 4.5e-26 121.3 108 56.5
VMungo0251G3225 Vigna mungo HOM05D003133 ORTHO05D003642 4.5e-26 121.3 108 56.5
Aqoxy7G00341 Aquilegia oxysepala HOM05D003133 ORTHO05D003642 5.9e-26 120.9 108 56.5
Lalb_Chr09g0333371 Lupinus albus HOM05D003133 ORTHO05D003642 5.9e-26 120.9 108 55.6
Peaxi162Scf00119g00083 Petunia axillaris HOM05D003133 ORTHO05D003642 5.9e-26 120.9 108 56.5
Sp7g21160 Schrenkiella parvula HOM05D003133 ORTHO05D003642 5.9e-26 120.9 108 55.6
Solyc08g081010.3 Solanum lycopersicum HOM05D003133 ORTHO05D003642 5.9e-26 120.9 108 55.6
Sopen08g029330 Solanum pennellii HOM05D003133 ORTHO05D003642 5.9e-26 120.9 108 55.6
THA.LOC104814473 Tarenaya hassleriana HOM05D003133 ORTHO05D003642 5.9e-26 120.9 108 56.5
BcaC09g51026 Brassica carinata HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 54.6
A01p14400 Brassica napus HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 54.6
C01p17720 Brassica napus HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 54.6
BolC1t01707H Brassica oleracea HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 54.6
BraA01t01385Z Brassica rapa HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 54.6
Ciclev10019696m.g Citrus clementina HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 56.5
COL.COLO4_34458 Corchorus olitorius HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 56.5
MBI18_g34593_MAGBIO Magnolia biondii HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 56.5
Nitab4.5_0003441g0130 Nicotiana tabacum HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 56.5
Nitab4.5_0010612g0020 Nicotiana tabacum HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 56.5
Potri.003G126900 Populus trichocarpa HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 56.5
Thecc.03G278200 Theobroma cacao HOM05D003133 ORTHO05D003642 7.7e-26 120.6 108 56.5
Aa31LG6G5160 Aethionema arabicum HOM05D003133 ORTHO05D003642 1.0e-25 120.2 108 55.6
MSTRG.13837 Avicennia marina HOM05D003133 ORTHO05D003642 1.0e-25 120.2 108 56.5
Glyma.08G014300 Glycine max HOM05D003133 ORTHO05D003642 1.0e-25 120.2 108 55.6
Manes.02G022200 Manihot esculenta HOM05D003133 ORTHO05D003642 1.0e-25 120.2 108 56.5
Prupe.5G099700 Prunus persica HOM05D003133 ORTHO05D003642 1.0e-25 120.2 108 56.5
QL12p033200 Quercus lobata HOM05D003133 ORTHO05D003642 1.0e-25 120.2 108 56.5
BcaNung00995 Brassica carinata HOM05D003133 ORTHO05D003642 1.3e-25 119.8 108 54.6
Nn6g33441 Nelumbo nucifera HOM05D003133 ORTHO05D003642 1.3e-25 119.8 108 55.6
Nn6g33461 Nelumbo nucifera HOM05D003133 ORTHO05D003642 1.3e-25 119.8 108 55.6
Eucgr.D01848 Eucalyptus grandis HOM05D003133 ORTHO05D003642 1.7e-25 119.4 108 56.5
Os07g0462000 Oryza sativa ssp. japonica HOM05D003133 ORTHO05D003642 1.7e-25 119.4 108 55.6
PGR031G1439 Punica granatum HOM05D003133 ORTHO05D003642 1.7e-25 119.4 108 54.6
PGSC0003DMG400012210 Solanum tuberosum HOM05D003133 ORTHO05D003642 1.7e-25 119.4 108 54.6
Cfa012177 Carpinus fangiana HOM05D003133 ORTHO05D003642 2.2e-25 119.0 108 55.6
Haze_08845 Corylus avellana HOM05D003133 ORTHO05D003642 2.2e-25 119.0 108 55.6
Os05g0129000 Oryza sativa ssp. japonica HOM05D003133 ORTHO05D003642 2.2e-25 119.0 108 54.6
TWI81G1077 Tripterygium wilfordii HOM05D003133 ORTHO05D003642 2.2e-25 119.0 108 55.6
Carub.0007s1815 Capsella rubella HOM05D003133 ORTHO05D003642 2.9e-25 118.6 108 54.6
MELO3C005674.2 Cucumis melo HOM05D003133 ORTHO05D003642 2.9e-25 118.6 108 54.6
CsaV3_5G002830 Cucumis sativus L. HOM05D003133 ORTHO05D003642 2.9e-25 118.6 108 54.6
Manes.01G061500 Manihot esculenta HOM05D003133 ORTHO05D003642 2.9e-25 118.6 87 67.8
Hund14791 Selenicereus undatus HOM05D003133 ORTHO05D003642 2.9e-25 118.6 108 54.6
GSVIVG01019757001 Vitis vinifera HOM05D003133 ORTHO05D003642 2.9e-25 118.6 108 56.5
Dinv37643 Davidia involucrata HOM05D003133 ORTHO05D003642 3.8e-25 118.2 108 55.6
FvH4_5g02350 Fragaria vesca HOM05D003133 ORTHO05D003642 3.8e-25 118.2 108 55.6
FAN04G0830 Fragaria x ananassa HOM05D003133 ORTHO05D003642 3.8e-25 118.2 108 55.6
FAN08G3005 Fragaria x ananassa HOM05D003133 ORTHO05D003642 3.8e-25 118.2 108 55.6
FAN13G1971 Fragaria x ananassa HOM05D003133 ORTHO05D003642 3.8e-25 118.2 108 55.6
FAN18G2670 Fragaria x ananassa HOM05D003133 ORTHO05D003642 3.8e-25 118.2 108 55.6
Lj2A192G38 Lonicera japonica HOM05D003133 ORTHO05D003642 3.8e-25 118.2 108 55.6
RcHm_v2.0_Chr7g0197771 Rosa chinensis HOM05D003133 ORTHO05D003642 3.8e-25 118.2 108 55.6
MD14G1104000 Malus domestica HOM05D003133 ORTHO05D003642 5.0e-25 117.9 108 55.6
Hund11475 Selenicereus undatus HOM05D003133 ORTHO05D003642 6.5e-25 117.5 108 53.7
EL10Ac5g13059 Beta vulgaris HOM05D003133 ORTHO05D003642 8.5e-25 117.1 108 52.8
Lj8A228T23 Lonicera japonica HOM05D003133 ORTHO05D003642 8.5e-25 117.1 108 54.6
Lj8A232T62 Lonicera japonica HOM05D003133 ORTHO05D003642 8.5e-25 117.1 108 54.6
TWI15G0789 Tripterygium wilfordii HOM05D003133 ORTHO05D003642 8.5e-25 117.1 108 54.6
CSS0043939 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 1.1e-24 116.7 108 54.6
CSS0049388 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 1.1e-24 116.7 108 54.6
Rhsim02G0230000 Rhododendron simsii HOM05D003133 ORTHO05D003642 1.1e-24 116.7 108 54.6
Zm00001eb354890 Zea mays HOM05D003133 ORTHO05D003642 1.1e-24 116.7 108 54.6
SalBow7G4504 Salvia bowleyana HOM05D003133 ORTHO05D003642 1.4e-24 116.3 108 54.6
CAN.G774.27 Capsicum annuum HOM05D003133 ORTHO05D003642 1.9e-24 115.9 106 54.7
MD06G1082500 Malus domestica HOM05D003133 ORTHO05D003642 1.9e-24 115.9 108 54.6
TAR636G2389 Trochodendron aralioides HOM05D003133 ORTHO05D003642 1.9e-24 115.9 108 54.6
Sed0025899 Sechium edule HOM05D003133 ORTHO05D003642 2.5e-24 115.5 108 52.8
HPP92_015162 Vanilla planifolia HOM05D003133 ORTHO05D003642 2.5e-24 115.5 108 53.7
AUR62003405 Chenopodium quinoa HOM05D003133 ORTHO05D003642 3.2e-24 115.2 108 52.8
AUR62017210 Chenopodium quinoa HOM05D003133 ORTHO05D003642 3.2e-24 115.2 108 52.8
ClCG01G002740 Citrullus lanatus HOM05D003133 ORTHO05D003642 3.2e-24 115.2 108 52.8
HanXRQChr17g0533681 Helianthus annuus HOM05D003133 ORTHO05D003642 3.2e-24 115.2 108 53.7
Hma1.2p1_2966F.1_g330980 Hydrangea macrophylla HOM05D003133 ORTHO05D003642 3.2e-24 115.2 108 53.7
Oeu009160.2 Olea europaea HOM05D003133 ORTHO05D003642 3.2e-24 115.2 108 53.7
HanXRQChr06g0165551 Helianthus annuus HOM05D003133 ORTHO05D003642 4.2e-24 114.8 108 53.7
SGA_v2.0_scaffold173G39193 Striga asiatica HOM05D003133 ORTHO05D003642 4.2e-24 114.8 108 53.7
ATR0810G035 Amborella trichopoda HOM05D003133 ORTHO05D003642 5.5e-24 114.4 108 53.7
TAR629G0119 Trochodendron aralioides HOM05D003133 ORTHO05D003642 5.5e-24 114.4 108 53.7
CDE09G0774 Ceratophyllum demersum HOM05D003133 ORTHO05D003642 7.2e-24 114.0 108 51.9
CDE11G0240 Ceratophyllum demersum HOM05D003133 ORTHO05D003642 7.2e-24 114.0 108 51.9
Sc22g0005610 Simmondsia chinensis HOM05D003133 ORTHO05D003642 9.4e-24 113.6 108 53.7
SalBow8G3631 Salvia bowleyana HOM05D003133 ORTHO05D003642 1.2e-23 113.2 108 52.8
Lsat_1_v5_gn_1_34361 Lactuca sativa HOM05D003133 ORTHO05D003642 2.1e-23 112.5 108 52.8
Cc08_g14690 Coffea canephora HOM05D003133 ORTHO05D003642 2.7e-23 112.1 108 51.9
Migut.A00769 Erythranthe guttata HOM05D003133 ORTHO05D003642 2.7e-23 112.1 108 51.9
SMO353G0160 Selaginella moellendorffii HOM05D003133 ORTHO05D003642 2.7e-23 112.1 108 52.8
Mapoly0043s0124 Marchantia polymorpha HOM05D003133 ORTHO05D003642 3.6e-23 111.7 108 53.7
Pp3c2_1270 Physcomitrium patens HOM05D003133 ORTHO05D003642 3.6e-23 111.7 108 51.9
ECA246G1277 Erigeron canadensis HOM05D003133 ORTHO05D003642 4.7e-23 111.3 108 50.9
Cpa.g.sc74.44 Carica papaya HOM05D003133 ORTHO05D003642 7.9e-23 110.5 113 52.2
vmacro11331 Vaccinium macrocarpon HOM05D003133 ORTHO05D003642 1.0e-22 110.2 108 53.7
AagrBONN_evm.TU.Sc2ySwM_228.1870 Anthoceros agrestis HOM05D003133 ORTHO05D003642 1.4e-22 109.8 108 51.9
Prupe.5G099600 Prunus persica HOM05D003133 ORTHO05D003642 1.8e-22 109.4 108 50.9
Cfa012180 Carpinus fangiana HOM05D003133 ORTHO05D003642 3.0e-22 108.6 108 51.9
A03p54020 Brassica napus HOM05D003133 ORTHO05D003642 8.8e-22 107.1 108 48.1
BraA03t14470Z Brassica rapa HOM05D003133 ORTHO05D003642 8.8e-22 107.1 108 48.1
LjContig00312_ERROPOS870357g0003358 Lotus japonicus HOM05D003133 ORTHO05D003642 8.8e-22 107.1 108 51.9
Lalb_Chr09g0320991 Lupinus albus HOM05D003133 ORTHO05D003642 8.8e-22 107.1 108 52.8
DCAR_004635 Daucus carota HOM05D003133 ORTHO05D003642 4.4e-21 104.8 101 53.5
Pp3c1_34800 Physcomitrium patens HOM05D003133 ORTHO05D003642 4.4e-21 104.8 108 50.0
BcaNung03246 Brassica carinata HOM05D003133 ORTHO05D003642 5.7e-21 104.4 108 47.2
C07p52420 Brassica napus HOM05D003133 ORTHO05D003642 5.7e-21 104.4 108 46.3
BolC7t45737H Brassica oleracea HOM05D003133 ORTHO05D003642 5.7e-21 104.4 108 46.3
Medtr5g010250 Medicago truncatula HOM05D003133 ORTHO05D003642 7.4e-21 104.0 108 50.9
Glyma.01G219900 Glycine max HOM05D003133 ORTHO05D003642 2.2e-20 102.4 108 50.0
BcaNung01476 Brassica carinata HOM05D003133 ORTHO05D003642 4.8e-20 101.3 108 45.4
PRCOL_00004592 Prasinoderma coloniale HOM05D003133 ORTHO05D003642 4.8e-20 101.3 108 45.4
Cfa012179 Carpinus fangiana HOM05D003133 ORTHO05D003642 6.3e-20 100.9 108 46.3
QL07p017350 Quercus lobata HOM05D003133 ORTHO05D003642 6.3e-20 100.9 108 48.1
AL5G13020 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 1.8e-19 99.4 108 45.4
TPR.G6641 Trifolium pratense HOM05D003133 ORTHO05D003642 1.8e-19 99.4 108 50.0
AL7G30390 Arabidopsis lyrata HOM05D003133 ORTHO05D003642 3.1e-19 98.6 108 45.4
Oeu011047.1 Olea europaea HOM05D003133 ORTHO05D003642 4.1e-19 98.2 155 40.0
VMungo1215G2488 Vigna mungo HOM05D003133 ORTHO05D003642 5.3e-19 97.8 102 50.0
MD07G1036400 Malus domestica HOM05D003133 ORTHO05D003642 6.9e-19 97.4 113 44.2
BcaC01g00811 Brassica carinata HOM05D003133 ORTHO05D003642 2.0e-18 95.9 88 56.8
Atru.chr9.2197 Acer truncatum HOM05D003133 ORTHO05D003642 2.6e-18 95.5 56 75.0
Phvul.002G157600 Phaseolus vulgaris HOM05D003133 ORTHO05D003642 3.4e-18 95.1 100 50.0
SMO143G0252 Selaginella moellendorffii HOM05D003133 ORTHO05D003642 1.0e-17 93.6 108 49.1
Carub.0007s2982 Capsella rubella HOM05D003133 ORTHO05D003642 1.3e-17 93.2 108 43.5
DCAR_004633 Daucus carota HOM05D003133 ORTHO05D003642 2.9e-17 92.0 56 71.4
CSS0000321 Camellia sinensis var. sinensis HOM05D003133 ORTHO05D003642 2.5e-16 89.0 103 48.5
Haze_08839 Corylus avellana HOM05D003133 ORTHO05D003642 3.2e-16 88.6 56 69.6
CBR_g17908 Chara braunii HOM05D003133 ORTHO05D003642 4.2e-16 88.2 108 41.7
MCO14G076 Micromonas commoda HOM05D003133 ORTHO05D003642 5.5e-16 87.8 108 43.5
Cre02.g077100 Chlamydomonas reinhardtii HOM05D003133 ORTHO05D003642 9.4e-16 87.0 108 43.5
C03p84590 Brassica napus HOM05D003133 ORTHO05D003642 3.6e-15 85.1 95 50.5
BolC3t20748H Brassica oleracea HOM05D003133 ORTHO05D003642 3.6e-15 85.1 95 50.5
unitig_88.g27613 Utricularia gibba HOM05D003133 ORTHO05D003642 4.7e-15 84.7 87 51.7
Haze_08840 Corylus avellana HOM05D003133 ORTHO05D003642 6.1e-15 84.3 56 64.3
Duzib068G0542 Durio zibethinus HOM05D003133 ORTHO05D003642 1.8e-14 82.8 126 40.5
ATR0680G192 Amborella trichopoda HOM05D003133 ORTHO05D003642 2.3e-14 82.4 56 62.5
SEGI_21135 Sequoiadendron giganteum HOM05D003133 ORTHO05D003642 1.1e-13 80.1 83 51.8
Hma1.2p1_0792F.1_g218580 Hydrangea macrophylla HOM05D003133 ORTHO05D003642 2.0e-13 79.3 83 50.6
arahy.Tifrunner.gnm1.ann1.Y73929 Arachis hypogaea HOM05D003133 ORTHO05D003642 2.6e-13 79.0 48 77.1
SHI07126 Sapria himalayana HOM05D003133 ORTHO05D003642 2.4e-11 72.4 104 41.3
Pp3c22_12540 Physcomitrium patens HOM05D003133 ORTHO05D003642 5.3e-11 71.2 108 39.8


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