Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 8.2e-263 909.8 456 100.0
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 2.5e-251 871.7 456 95.2
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 8.8e-249 863.2 456 95.2
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 9.8e-248 859.8 456 95.0
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 9.5e-243 843.2 456 92.5
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 2.3e-241 838.6 456 92.1
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 5.2e-241 837.4 456 91.9
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 1.4e-238 829.3 456 91.0
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 1.9e-235 818.9 456 89.7
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 3.2e-230 801.6 461 87.6
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 4.1e-230 801.2 461 87.6
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 7.8e-229 797.0 458 87.6
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 5.6e-227 790.8 458 86.2
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 2.3e-225 785.4 456 85.5
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 8.3e-223 776.9 455 84.2
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 1.9e-222 775.8 456 85.1
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 2.4e-222 775.4 456 84.4
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 2.4e-222 775.4 456 85.3
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.7e-220 769.2 456 84.2
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.7e-220 769.2 456 83.1
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 3.0e-220 768.5 456 84.0
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 3.9e-220 768.1 457 84.9
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 6.6e-220 767.3 457 84.7
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 6.6e-220 767.3 457 84.7
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 8.6e-220 766.9 456 84.2
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 1.9e-219 765.8 464 84.5
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 1.9e-219 765.8 464 83.2
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 3.3e-219 765.0 456 83.8
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 4.3e-219 764.6 447 85.9
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 7.3e-219 763.8 453 84.5
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 9.5e-219 763.5 457 84.5
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 1.6e-218 762.7 456 83.6
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 2.1e-218 762.3 456 84.0
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 2.8e-218 761.9 456 83.1
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 3.6e-218 761.5 456 83.1
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 3.6e-218 761.5 456 83.3
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 3.6e-218 761.5 428 86.9
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 6.2e-218 760.8 450 84.7
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 1.8e-217 759.2 427 86.9
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.8e-217 759.2 456 83.1
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 8.9e-217 756.9 457 82.3
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 1.2e-216 756.5 449 83.7
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 2.0e-216 755.7 456 81.8
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 9.8e-216 753.4 460 81.5
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 8.3e-215 750.4 443 84.0
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 8.3e-215 750.4 462 81.4
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 1.1e-214 750.0 421 87.9
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 5.4e-214 747.7 462 81.2
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 5.4e-214 747.7 462 81.0
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 5.4e-214 747.7 457 80.7
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 9.2e-214 746.9 457 80.7
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 1.2e-213 746.5 506 76.5
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 2.1e-213 745.7 458 80.3
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.1e-213 745.7 462 81.0
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 3.5e-213 745.0 463 79.5
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 4.6e-213 744.6 456 80.7
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 4.6e-213 744.6 456 80.7
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 4.6e-213 744.6 464 79.3
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 6.0e-213 744.2 455 80.7
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 6.0e-213 744.2 462 80.7
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 1.3e-212 743.0 451 82.3
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 1.3e-212 743.0 451 82.3
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 1.7e-212 742.7 456 80.5
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 1.7e-212 742.7 456 80.5
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 1.7e-212 742.7 457 80.5
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 2.3e-212 742.3 447 81.7
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 3.0e-212 741.9 451 82.5
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 5.1e-212 741.1 457 80.3
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 1.1e-211 740.0 455 80.2
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 1.9e-211 739.2 420 86.7
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 2.5e-211 738.8 457 80.1
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 5.6e-211 737.6 421 85.7
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 2.8e-210 735.3 463 78.6
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 3.6e-210 734.9 436 83.5
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 4.7e-210 734.6 437 83.8
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 8.1e-210 733.8 475 78.7
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 1.1e-209 733.4 429 86.0
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 1.1e-209 733.4 429 86.0
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 1.8e-209 732.6 463 79.3
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 1.8e-209 732.6 463 79.3
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 5.2e-209 731.1 427 83.6
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 2.0e-208 729.2 434 83.4
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 5.8e-208 727.6 461 80.3
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 2.9e-207 725.3 413 85.7
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 3.8e-207 724.9 464 79.1
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 1.1e-206 723.4 443 81.7
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 2.4e-206 722.2 432 82.9
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 3.2e-206 721.8 433 83.8
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 3.2e-206 721.8 461 80.9
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 3.5e-205 718.4 427 82.4
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 6.6e-204 714.1 466 77.7
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.9e-203 712.6 461 78.1
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 1.9e-203 712.6 463 78.4
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 9.6e-203 710.3 471 75.8
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 1.2e-202 709.9 439 80.9
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 6.9e-201 704.1 413 82.6
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 1.3e-199 699.9 438 79.7
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 6.0e-197 691.0 391 85.9
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 9.0e-193 677.2 481 72.6
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 5.4e-190 667.9 384 85.4
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 6.0e-189 664.5 455 75.4
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 2.3e-188 662.5 384 84.6
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 6.7e-188 661.0 459 74.3
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 6.7e-188 661.0 524 67.0
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 3.3e-187 658.7 397 82.6
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 9.6e-187 657.1 432 75.7
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.1e-185 653.7 424 78.8
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 1.4e-185 653.3 410 78.5
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 4.0e-185 651.7 462 72.3
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 3.0e-180 635.6 414 76.3
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 2.5e-179 632.5 443 72.9
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 4.8e-178 628.2 439 71.5
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 1.8e-177 626.3 413 76.0
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 9.0e-177 624.0 457 71.6
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 4.9e-175 618.2 471 67.9
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 1.6e-173 613.2 409 73.6
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 5.9e-168 594.7 410 71.7
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.0e-164 583.9 453 69.3
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 1.9e-163 579.7 374 78.1
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 3.7e-154 548.9 551 56.6
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.9e-150 536.6 330 82.1
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 1.6e-144 516.9 429 59.9
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 9.4e-142 507.7 330 77.9
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 7.5e-131 471.5 411 58.4
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 1.1e-121 441.0 401 57.9
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 1.0e-119 434.5 369 60.4
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 7.0e-113 411.8 256 80.1
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 3.3e-110 402.9 275 73.5
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 1.7e-106 390.6 420 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 4.6e-104 382.5 407 52.3
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 1.1e-81 308.1 173 88.4
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 4.6e-80 302.8 189 83.1
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 1.7e-79 300.8 310 53.9
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 5.8e-75 285.8 377 43.2
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 6.9e-60 235.7 361 40.7
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 3.2e-57 226.9 160 69.4
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 5.7e-46 189.5 117 82.9
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 4.8e-45 186.4 424 33.0
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 6.7e-31 139.4 83 79.5
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 4.8e-29 133.3 81 87.7
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 1.8e-28 131.3 72 84.7
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 7.7e-27 125.9 69 85.5
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 1.7e-21 108.2 67 86.6
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 3.7e-21 107.1 105 58.1
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 4.1e-20 103.6 76 68.4
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 1.2e-16 92.0 61 73.8
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 2.3e-15 87.8 59 78.0
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 2.0e-14 84.7 296 26.7
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 1.7e-10 71.6 50 66.0
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 8.0e-08 62.8 46 65.2
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 8.0e-08 62.8 46 65.2
AUR62002710 Chenopodium quinoa HOM05D004870 ORTHO05D138226 1.2e-06 58.9 44 68.2
Mapoly0033s0018 Marchantia polymorpha HOM05D002170 ORTHO05D007478 7.5e-06 56.2 205 28.3


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