Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40025 Trifolium pratense HOM05D003169 ORTHO05D003700 9.0e-50 199.9 98 100.0
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 2.8e-43 178.3 98 89.8
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 8.2e-43 176.8 98 86.7
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 7.7e-41 170.2 98 85.7
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 2.7e-38 161.8 98 79.6
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 2.7e-38 161.8 98 78.6
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 3.6e-38 161.4 98 78.6
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 4.6e-38 161.0 98 78.6
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 1.0e-37 159.8 98 76.5
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 1.4e-37 159.5 98 76.5
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 1.4e-37 159.5 98 77.6
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 1.8e-37 159.1 98 76.5
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 1.8e-37 159.1 98 79.6
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 5.1e-37 157.5 98 78.6
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 8.8e-37 156.8 98 75.5
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 8.8e-37 156.8 98 75.5
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 2.5e-36 155.2 98 75.5
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 3.3e-36 154.8 98 75.5
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 2.8e-35 151.8 98 71.4
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 2.8e-35 151.8 98 71.4
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 2.8e-35 151.8 98 71.4
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 3.7e-35 151.4 98 73.5
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 6.3e-35 150.6 98 70.4
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 8.2e-35 150.2 98 70.4
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 1.1e-34 149.8 98 69.4
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 1.4e-34 149.4 98 69.4
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 1.8e-34 149.1 98 68.4
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 1.8e-34 149.1 98 68.4
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 1.8e-34 149.1 98 68.4
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 1.8e-34 149.1 98 71.4
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 2.4e-34 148.7 98 70.4
QL04p010784 Quercus lobata HOM05D003169 ORTHO05D003700 2.4e-34 148.7 98 70.4
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 2.4e-34 148.7 98 70.4
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 2.4e-34 148.7 98 69.4
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 3.1e-34 148.3 98 69.4
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 3.1e-34 148.3 130 63.8
Cpa.g.sc32.147 Carica papaya HOM05D003169 ORTHO05D003700 5.3e-34 147.5 98 68.4
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 5.3e-34 147.5 98 69.4
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 1.2e-33 146.4 98 70.4
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 1.5e-33 146.0 98 67.3
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 1.5e-33 146.0 98 75.5
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 2.0e-33 145.6 98 66.3
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 2.6e-33 145.2 98 68.4
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 3.4e-33 144.8 98 68.4
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 5.9e-33 144.1 98 70.4
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 7.7e-33 143.7 98 66.3
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 1.3e-32 142.9 98 65.3
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 1.7e-32 142.5 98 65.3
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 1.7e-32 142.5 98 69.4
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 1.7e-32 142.5 98 66.3
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 2.2e-32 142.1 98 66.3
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 2.9e-32 141.7 98 65.3
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 2.9e-32 141.7 98 65.3
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 2.9e-32 141.7 98 65.3
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 3.8e-32 141.4 98 64.3
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 5.0e-32 141.0 98 66.3
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 5.0e-32 141.0 94 69.1
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 5.0e-32 141.0 98 66.3
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 1.1e-31 139.8 98 65.3
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.9e-31 139.0 98 63.3
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 2.5e-31 138.7 98 65.3
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 2.5e-31 138.7 98 65.3
Hund20128 Selenicereus undatus HOM05D003169 ORTHO05D003700 3.2e-31 138.3 98 61.2
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 4.2e-31 137.9 98 62.2
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 4.2e-31 137.9 98 64.3
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 5.5e-31 137.5 98 64.3
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 7.2e-31 137.1 98 63.3
Lj2A8G61 Lonicera japonica HOM05D003169 ORTHO05D003700 7.2e-31 137.1 98 63.3
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 9.4e-31 136.7 98 62.2
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 1.2e-30 136.3 98 64.3
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 1.6e-30 136.0 98 62.2
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 1.6e-30 136.0 98 64.3
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 2.1e-30 135.6 98 63.3
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 4.7e-30 134.4 98 63.3
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 6.1e-30 134.0 98 63.3
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 6.1e-30 134.0 98 62.2
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 7.9e-30 133.7 98 61.2
HanXRQChr13g0408911 Helianthus annuus HOM05D003169 ORTHO05D003700 1.0e-29 133.3 98 62.2
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 1.0e-29 133.3 98 62.2
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.8e-29 132.5 98 62.2
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 1.8e-29 132.5 98 62.2
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 1.8e-29 132.5 98 63.3
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.0e-29 131.7 105 61.0
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 3.0e-29 131.7 98 62.2
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 3.9e-29 131.3 98 62.2
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.9e-29 131.3 105 61.0
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 5.1e-29 131.0 98 61.2
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 5.1e-29 131.0 98 61.2
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 5.1e-29 131.0 98 61.2
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 5.1e-29 131.0 98 61.2
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 5.1e-29 131.0 98 61.2
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 5.1e-29 131.0 98 61.2
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 5.1e-29 131.0 98 61.2
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 6.7e-29 130.6 98 62.2
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.1e-28 129.8 105 60.0
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 1.5e-28 129.4 98 60.2
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 2.0e-28 129.0 98 60.2
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 2.0e-28 129.0 98 60.2
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 2.0e-28 129.0 98 57.1
Oeu029455.1 Olea europaea HOM05D003169 ORTHO05D003700 3.3e-28 128.3 98 61.2
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 4.4e-28 127.9 98 60.2
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 1.7e-27 125.9 98 59.2
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 1.7e-27 125.9 98 59.2
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 2.2e-27 125.6 98 56.1
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 2.8e-27 125.2 98 58.2
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 2.8e-27 125.2 98 59.2
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 2.8e-27 125.2 98 56.1
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 1.1e-26 123.2 98 57.1
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 1.1e-26 123.2 99 58.6
Oeu032680.1 Olea europaea HOM05D003169 ORTHO05D003700 1.8e-26 122.5 98 59.2
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 1.3e-24 116.3 98 51.0
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.7e-24 115.9 146 43.8
Peaxi162Scf00166g00077 Petunia axillaris HOM05D003169 ORTHO05D003700 1.7e-24 115.9 99 56.6
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 2.9e-24 115.2 99 56.6
SEGI_09386 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 3.8e-24 114.8 98 53.1
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 5.0e-24 114.4 98 52.0
Rhsim06G0106300 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.1e-23 113.2 98 56.1
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 5.2e-21 104.4 98 50.0
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 2.0e-17 92.4 66 62.1
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 3.5e-17 91.7 98 49.0
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 4.5e-17 91.3 58 69.0
SMO358G0497 Selaginella moellendorffii HOM05D003169 ORTHO05D003700 2.9e-16 88.6 99 47.5
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 3.8e-16 88.2 98 42.9
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 5.5e-15 84.3 98 44.9
TPR.G19390 Trifolium pratense HOM05D003169 ORTHO05D003700 1.8e-13 79.3 54 75.9
Os08g0223833 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 5.2e-13 77.8 60 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 8.8e-13 77.0 98 39.8
Nitab4.5_0003291g0040 Nicotiana tabacum HOM05D003169 ORTHO05D003700 8.8e-13 77.0 108 39.8
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 2.6e-12 75.5 98 44.9
MBI18_g37376_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 7.5e-12 73.9 53 56.6
TPR.G36062 Trifolium pratense HOM05D003169 ORTHO05D410466 7.5e-12 73.9 34 94.1
TPR.G7301 Trifolium pratense HOM05D003169 ORTHO05D003700 4.8e-11 71.2 39 94.9
TPR.G14822 Trifolium pratense HOM05D003169 ORTHO05D003700 1.8e-10 69.3 97 43.3
TPR.G39754 Trifolium pratense HOM05D003169 ORTHO05D003700 2.7e-09 65.5 59 59.3
COL.COLO4_25001 Corchorus olitorius HOM05D003169 ORTHO05D003700 8.5e-08 60.5 39 66.7
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 5.5e-07 57.8 58 46.6


User provided reference genes

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