Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39281 Trifolium pratense HOM05D009122 ORTHO05D011085 1.4e-86 322.8 149 100.0
TPR.G35808 Trifolium pratense HOM05D009122 ORTHO05D011085 8.0e-74 280.4 133 97.7
TPR.G39831 Trifolium pratense HOM05D000003 ORTHO05D000004 6.2e-34 147.9 115 53.9
Psat7g241280 Pisum sativum HOM05D000003 ORTHO05D000004 3.0e-28 129.0 146 39.7
Psat2g135320 Pisum sativum HOM05D009122 ORTHO05D011085 1.9e-22 109.8 138 39.1
TPR.G26312 Trifolium pratense HOM05D009122 ORTHO05D011085 1.9e-22 109.8 103 47.6
TPR.G12894 Trifolium pratense HOM05D000003 ORTHO05D000004 1.6e-21 106.7 128 38.3
TPR.G20657 Trifolium pratense HOM05D009122 ORTHO05D011085 4.6e-21 105.1 136 33.8
Psat2g135240 Pisum sativum HOM05D009122 ORTHO05D011085 1.3e-18 97.1 132 37.1
TPR.G35390 Trifolium pratense HOM05D000003 ORTHO05D000004 3.6e-18 95.5 130 37.7
Psat6g031080 Pisum sativum HOM05D009122 ORTHO05D011085 1.4e-17 93.6 121 35.5
Psat6g066320 Pisum sativum HOM05D000003 ORTHO05D011085 5.3e-17 91.7 124 34.7
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 9.0e-17 90.9 115 37.4
Psat0s4034g0160 Pisum sativum HOM05D009122 ORTHO05D011085 5.8e-16 88.2 127 33.1
TPR.G18181 Trifolium pratense HOM05D002880 ORTHO05D003450 5.8e-16 88.2 112 37.5
Psat1g018640 Pisum sativum HOM05D009122 ORTHO05D011085 9.9e-16 87.4 104 35.6
Psat4g029800 Pisum sativum HOM05D000003 ORTHO05D000004 9.9e-16 87.4 153 33.3
Psat0s212g0120 Pisum sativum HOM05D000003 ORTHO05D000004 1.4e-14 83.6 149 28.9
TPR.G36591 Trifolium pratense HOM05D009122 ORTHO05D011085 1.4e-14 83.6 97 37.1
Psat4g035320 Pisum sativum HOM05D000894 ORTHO05D001833 1.9e-14 83.2 96 39.6
Psat5g176960 Pisum sativum HOM05D000003 ORTHO05D000004 2.4e-14 82.8 155 29.7
Psat4g049280 Pisum sativum HOM05D009122 ORTHO05D011085 4.2e-14 82.0 97 35.1
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 1.6e-13 80.1 145 31.7
LjContig00357g0004525 Lotus japonicus HOM05D000003 ORTHO05D000022 4.6e-13 78.6 149 32.9
Psat5g292000 Pisum sativum HOM05D009122 ORTHO05D012377 1.3e-12 77.0 100 35.0
Psat0s471g0240 Pisum sativum HOM05D000583 ORTHO05D000442 3.9e-12 75.5 92 40.2
TPR.G36274 Trifolium pratense HOM05D009122 ORTHO05D011085 5.1e-12 75.1 72 41.7
Psat0s302g0240 Pisum sativum HOM05D000003 ORTHO05D011085 1.1e-11 73.9 132 29.5
Psat5g143280 Pisum sativum HOM05D000003 ORTHO05D011085 1.5e-11 73.6 118 28.0
Psat6g198920 Pisum sativum HOM05D009122 ORTHO05D012377 2.5e-11 72.8 127 30.7
TPR.G3646 Trifolium pratense HOM05D040704 ORTHO05D012377 2.5e-11 72.8 123 26.0
TPR.G40207 Trifolium pratense HOM05D009122 ORTHO05D011085 2.5e-11 72.8 123 34.1
Psat0s2481g0120 Pisum sativum HOM05D009122 ORTHO05D011085 1.1e-09 67.4 106 27.4
Psat7g032160 Pisum sativum HOM05D009122 ORTHO05D011085 1.8e-09 66.6 103 30.1
CANSAT78G0367 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-09 65.1 107 30.8
PSO017G1399 Papaver somniferum HOM05D000003 ORTHO05D000004 5.3e-09 65.1 148 25.7
CANSAT80G2799 Cannabis sativa HOM05D000003 ORTHO05D000004 9.0e-09 64.3 144 27.1
Psat2g050880 Pisum sativum HOM05D009122 ORTHO05D011085 9.0e-09 64.3 107 27.1
RcHm_v2.0_Chr5g0053531 Rosa chinensis HOM05D000003 ORTHO05D000004 1.5e-08 63.5 146 23.3
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.0e-08 63.2 147 25.9
PSO017G6986 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-08 62.8 151 28.5
Aqoxy1G03455 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.4e-08 62.4 144 23.6
Psat7g047000 Pisum sativum HOM05D000003 ORTHO05D000022 3.4e-08 62.4 109 32.1
SEGI_11422 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 3.4e-08 62.4 102 34.3
Medtr8g016985 Medicago truncatula HOM05D000003 ORTHO05D000004 4.5e-08 62.0 140 29.3
PSO210G1365 Papaver somniferum HOM05D000003 ORTHO05D000004 7.6e-08 61.2 99 31.3
Psat2g179720 Pisum sativum HOM05D009122 ORTHO05D011085 9.9e-08 60.8 106 32.1
COL.COLO4_21884 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.3e-07 60.5 144 27.1
PSO478G1811 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-07 60.5 148 26.4
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-07 59.7 147 23.1
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-07 59.7 67 35.8
PSO425G0059 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-07 59.7 150 27.3
Psat2g169680 Pisum sativum HOM05D009122 ORTHO05D011085 2.2e-07 59.7 71 35.2
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-07 59.3 71 31.0
CiPaw.14G089200 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.9e-07 59.3 143 25.9
CiPaw.09G081400 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.9e-07 58.5 61 41.0
Manes.13G092620 Manihot esculenta HOM05D000003 ORTHO05D000004 4.9e-07 58.5 80 36.2
Psat6g069840 Pisum sativum HOM05D000003 ORTHO05D011085 4.9e-07 58.5 98 34.7
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.4e-07 58.2 65 35.4
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.4e-07 57.8 68 33.8
Psat1g022800 Pisum sativum HOM05D000003 ORTHO05D011085 8.4e-07 57.8 129 27.1
RhsimUnG0226300 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.4e-07 57.8 96 31.2
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 1.4e-06 57.0 155 29.0
QL01p022100 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-06 57.0 146 27.4
Nn8g39045 Nelumbo nucifera HOM05D000003 ORTHO05D000004 1.9e-06 56.6 124 24.2
PSO170G0990 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 56.6 96 34.4
PSO170G5488 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 56.6 144 27.1
Hund17128 Selenicereus undatus HOM05D000003 ORTHO05D000022 1.9e-06 56.6 133 25.6
Atru.chr8.1026 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 56.2 126 27.8
MBI19_g17589_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.4e-06 56.2 135 27.4
CANSAT54G1748 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-06 55.8 148 24.3
PSO210G1250 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-06 55.8 147 23.8
Psat0ss3759g0280 Pisum sativum HOM05D009122 ORTHO05D011085 3.2e-06 55.8 73 34.2
Psat2g036280 Pisum sativum HOM05D000003 ORTHO05D000004 4.2e-06 55.5 69 34.8
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.5e-06 55.1 145 22.8
SGA_v2.0_scaffold245G44469 Striga asiatica HOM05D000003 ORTHO05D000022 5.5e-06 55.1 121 24.8
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.5e-06 55.1 157 27.4
CANSAT25G2060 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-06 54.7 134 29.1
CiPaw.03G196400 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.1e-06 54.7 144 25.0
CANSAT21G1000 Cannabis sativa HOM05D000003 ORTHO05D000004 9.3e-06 54.3 142 23.2
PSO384G0532 Papaver somniferum HOM05D000003 ORTHO05D001026 9.3e-06 54.3 145 26.2
Psat1g139400 Pisum sativum HOM05D009122 ORTHO05D012377 9.3e-06 54.3 81 30.9


User provided reference genes

Program Settings