Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39257 Trifolium pratense HOM05D001129 ORTHO05D413103 1.3e-44 182.6 88 100.0
Ca_23248_v3 Cicer arietinum L. HOM05D001129 ORTHO05D003814 5.7e-19 97.4 64 67.2
Medtr3g466820 Medicago truncatula HOM05D001129 ORTHO05D003814 7.7e-16 87.0 69 56.5
Psat5g149400 Pisum sativum HOM05D001129 ORTHO05D003814 1.0e-15 86.7 69 55.1
Ca_15041_v3 Cicer arietinum L. HOM05D001129 ORTHO05D003814 2.2e-15 85.5 69 52.2
Lalb_Chr18g0054261 Lupinus albus HOM05D001129 ORTHO05D003814 6.5e-15 84.0 69 53.6
Lj6g0006618 Lotus japonicus HOM05D001129 ORTHO05D003814 1.1e-14 83.2 66 54.5
TPR.G27380 Trifolium pratense HOM05D001129 ORTHO05D003814 1.1e-14 83.2 66 54.5
Glyma.18G053700 Glycine max HOM05D001129 ORTHO05D003814 1.9e-14 82.4 69 49.3
Phvul.006G077500 Phaseolus vulgaris HOM05D001129 ORTHO05D003814 9.4e-14 80.1 69 50.7
COL.COLO4_11207 Corchorus olitorius HOM05D001129 ORTHO05D003814 1.6e-13 79.3 69 52.2
Psat2g172400 Pisum sativum HOM05D001129 ORTHO05D003814 1.6e-13 79.3 69 50.7
VMungo0540G0021 Vigna mungo HOM05D001129 ORTHO05D003814 3.6e-13 78.2 69 49.3
Glyma.11G160300 Glycine max HOM05D001129 ORTHO05D003814 4.6e-13 77.8 69 47.8
arahy.Tifrunner.gnm1.ann1.HA8THR Arachis hypogaea HOM05D001129 ORTHO05D003814 7.9e-13 77.0 66 51.5
PGR102G0317 Punica granatum HOM05D001129 ORTHO05D003814 7.9e-13 77.0 59 57.6
Duzib168G0079 Durio zibethinus HOM05D001129 ORTHO05D003814 1.8e-12 75.9 68 48.5
arahy.Tifrunner.gnm1.ann1.1AE9PZ Arachis hypogaea HOM05D001129 ORTHO05D003814 2.3e-12 75.5 66 50.0
PSO384G2839 Papaver somniferum HOM05D001129 ORTHO05D003814 2.3e-12 75.5 66 53.0
Thecc.09G363300 Theobroma cacao HOM05D001129 ORTHO05D003814 2.3e-12 75.5 69 49.3
TPR.G29243 Trifolium pratense HOM05D001129 ORTHO05D003814 3.0e-12 75.1 67 50.7
TWI79G0222 Tripterygium wilfordii HOM05D001129 ORTHO05D003814 3.0e-12 75.1 69 47.8
Haze_24463 Corylus avellana HOM05D001129 ORTHO05D003814 3.9e-12 74.7 69 50.7
Dinv28728 Davidia involucrata HOM05D001129 ORTHO05D003814 3.9e-12 74.7 69 50.7
Cfa011826 Carpinus fangiana HOM05D001129 ORTHO05D003814 6.7e-12 73.9 69 50.7
PSO339G0703 Papaver somniferum HOM05D001129 ORTHO05D003814 6.7e-12 73.9 66 50.0
Migut.D00820 Erythranthe guttata HOM05D001129 ORTHO05D003814 8.8e-12 73.6 72 48.6
QL01p024916 Quercus lobata HOM05D001129 ORTHO05D003814 1.1e-11 73.2 69 46.4
Manes.02G208660 Manihot esculenta HOM05D001129 ORTHO05D003814 2.0e-11 72.4 65 50.8
TAR369G1057 Trochodendron aralioides HOM05D001129 ORTHO05D003814 2.0e-11 72.4 64 48.4
Nitab4.5_0002620g0020 Nicotiana tabacum HOM05D001129 ORTHO05D003814 2.5e-11 72.0 72 47.2
Atru.chr1.2504 Acer truncatum HOM05D001129 ORTHO05D003814 3.3e-11 71.6 69 47.8
ClCG02G019050 Citrullus lanatus HOM05D001129 ORTHO05D003814 3.3e-11 71.6 65 50.8
Gohir.D03G145400 Gossypium hirsutum HOM05D001129 ORTHO05D003814 3.3e-11 71.6 66 48.5
Gorai.003G152500 Gossypium raimondii HOM05D001129 ORTHO05D003814 3.3e-11 71.6 66 48.5
Nitab4.5_0000002g0190 Nicotiana tabacum HOM05D001129 ORTHO05D003814 4.3e-11 71.2 72 47.2
Potri.013G154600 Populus trichocarpa HOM05D001129 ORTHO05D003814 4.3e-11 71.2 66 50.0
arahy.Tifrunner.gnm1.ann1.MP07WF Arachis hypogaea HOM05D001129 ORTHO05D003814 5.7e-11 70.9 66 53.0
BraA08t35492Z Brassica rapa HOM05D001129 ORTHO05D003814 5.7e-11 70.9 65 46.2
Sabra13G0124500 Salix brachista HOM05D001129 ORTHO05D003814 5.7e-11 70.9 66 50.0
MSTRG.18541 Avicennia marina HOM05D001129 ORTHO05D003814 9.7e-11 70.1 69 47.8
CsaV3_6G019170 Cucumis sativus L. HOM05D001129 ORTHO05D003814 1.3e-10 69.7 65 47.7
MD11G1054400 Malus domestica HOM05D001129 ORTHO05D003814 1.3e-10 69.7 65 46.2
TAR623G0919 Trochodendron aralioides HOM05D001129 ORTHO05D003814 1.3e-10 69.7 66 47.0
MELO3C026877.2 Cucumis melo HOM05D001129 ORTHO05D003814 1.7e-10 69.3 65 47.7
vmacro02881 Vaccinium macrocarpon HOM05D001129 ORTHO05D003814 1.7e-10 69.3 69 47.8
CARHR006570 Cardamine hirsuta HOM05D001129 ORTHO05D003814 2.2e-10 68.9 65 46.2
Gohir.A03G023300 Gossypium hirsutum HOM05D001129 ORTHO05D003814 2.2e-10 68.9 66 47.0
Lj4g0007497 Lotus japonicus HOM05D001129 ORTHO05D003814 2.2e-10 68.9 85 42.4
SalBow1G3107 Salvia bowleyana HOM05D001129 ORTHO05D003814 2.8e-10 68.6 72 47.2
SGA_v2.0_scaffold20G09290 Striga asiatica HOM05D001129 ORTHO05D003814 2.8e-10 68.6 72 44.4
Hma1.2p1_0170F.1_g075000 Hydrangea macrophylla HOM05D001129 ORTHO05D003814 3.7e-10 68.2 68 48.5
Lj2C1101T10 Lonicera japonica HOM05D001129 ORTHO05D003814 3.7e-10 68.2 72 45.8
Peaxi162Scf00960g00120 Petunia axillaris HOM05D001129 ORTHO05D003814 3.7e-10 68.2 72 45.8
Sed0019452 Sechium edule HOM05D001129 ORTHO05D003814 3.7e-10 68.2 65 50.8
A08p35850 Brassica napus HOM05D001129 ORTHO05D003814 4.8e-10 67.8 65 44.6
C08p02730 Brassica napus HOM05D001129 ORTHO05D003814 4.8e-10 67.8 65 44.6
BolC8t47069H Brassica oleracea HOM05D003801 ORTHO05D004812 4.8e-10 67.8 65 44.6
AL1G16920 Arabidopsis lyrata HOM05D001129 ORTHO05D003814 6.3e-10 67.4 65 44.6
CDE06G0445 Ceratophyllum demersum HOM05D001129 ORTHO05D000075 6.3e-10 67.4 66 47.0
Oeu015568.1 Olea europaea HOM05D001129 ORTHO05D003814 6.3e-10 67.4 69 47.8
Solyc02g043860.3 Solanum lycopersicum HOM05D001129 ORTHO05D003814 6.3e-10 67.4 72 45.8
Sopen02g007490 Solanum pennellii HOM05D001129 ORTHO05D003814 6.3e-10 67.4 72 45.8
GSVIVG01024571001 Vitis vinifera HOM05D001129 ORTHO05D003814 6.3e-10 67.4 66 45.5
AT1G06900 Arabidopsis thaliana HOM05D001129 ORTHO05D003814 8.2e-10 67.0 65 44.6
AUR62009732 Chenopodium quinoa HOM05D001129 ORTHO05D003814 8.2e-10 67.0 64 46.9
Prupe.6G041800 Prunus persica HOM05D001129 ORTHO05D003814 8.2e-10 67.0 65 46.2
BcaB02g06767 Brassica carinata HOM05D001129 ORTHO05D003814 1.1e-09 66.6 65 44.6
Lsat_1_v5_gn_9_13880 Lactuca sativa HOM05D001129 ORTHO05D003814 1.1e-09 66.6 69 43.5
Rhsim13G0059900 Rhododendron simsii HOM05D001129 ORTHO05D003814 1.1e-09 66.6 69 44.9
Sp1g05610 Schrenkiella parvula HOM05D001129 ORTHO05D003814 1.1e-09 66.6 65 44.6
Actinidia11621 Actinidia chinensis HOM05D001129 ORTHO05D003814 1.4e-09 66.2 65 49.2
ATR1127G095 Amborella trichopoda HOM05D001129 ORTHO05D003814 1.4e-09 66.2 64 46.9
Aqoxy2G00701 Aquilegia oxysepala HOM05D001129 ORTHO05D003814 1.4e-09 66.2 64 48.4
Aqoxy5G03056 Aquilegia oxysepala HOM05D001129 ORTHO05D003814 1.4e-09 66.2 69 43.5
EL10Ac7g15852 Beta vulgaris HOM05D001129 ORTHO05D003814 1.4e-09 66.2 64 46.9
BcaC05g24658 Brassica carinata HOM05D001129 ORTHO05D003814 1.4e-09 66.2 65 43.1
BolC5t29275H Brassica oleracea HOM05D001129 ORTHO05D003814 1.4e-09 66.2 65 43.1
Cc01_g15280 Coffea canephora HOM05D001129 ORTHO05D003814 1.4e-09 66.2 69 47.8
ECA247G0490 Erigeron canadensis HOM05D001129 ORTHO05D003814 1.4e-09 66.2 72 40.3
CANSAT54G2955 Cannabis sativa HOM05D001129 ORTHO05D003814 1.8e-09 65.9 66 45.5
Ciclev10000133m.g Citrus clementina HOM05D001129 ORTHO05D003814 1.8e-09 65.9 59 50.8
Thhalv10006660m.g Eutrema salsugineum HOM05D001129 ORTHO05D003814 1.8e-09 65.9 65 43.1
MD03G1052300 Malus domestica HOM05D001129 ORTHO05D003814 1.8e-09 65.9 65 46.2
Oeu055223.1 Olea europaea HOM05D001129 ORTHO05D003814 1.8e-09 65.9 69 44.9
SEGI_03863 Sequoiadendron giganteum HOM05D001129 ORTHO05D019282 1.8e-09 65.9 63 49.2
A09p66710 Brassica napus HOM05D001129 ORTHO05D003814 2.4e-09 65.5 65 43.1
BraA09t42010Z Brassica rapa HOM05D001129 ORTHO05D003814 2.4e-09 65.5 65 43.1
Carub.0001s0619 Capsella rubella HOM05D001129 ORTHO05D003814 2.4e-09 65.5 65 43.1
AUR62036212 Chenopodium quinoa HOM05D001129 ORTHO05D003814 2.4e-09 65.5 64 46.9
HanXRQChr08g0230671 Helianthus annuus HOM05D001129 ORTHO05D003814 2.4e-09 65.5 62 46.8
CSS0010940 Camellia sinensis var. sinensis HOM05D001129 ORTHO05D003814 3.1e-09 65.1 72 45.8
FvH4_3g40361 Fragaria vesca HOM05D001129 ORTHO05D003814 4.1e-09 64.7 65 46.2
FAN11G2940 Fragaria x ananassa HOM05D001129 ORTHO05D003814 4.1e-09 64.7 65 46.2
HPP92_006786 Vanilla planifolia HOM05D001129 ORTHO05D003814 4.1e-09 64.7 69 43.5
C08p50940 Brassica napus HOM05D001129 ORTHO05D003814 5.3e-09 64.3 65 41.5
BolC8t52622H Brassica oleracea HOM05D001129 ORTHO05D003814 5.3e-09 64.3 65 41.5
ECA247G0660 Erigeron canadensis HOM05D001129 ORTHO05D003814 5.3e-09 64.3 66 45.5
Prupe.6G041900 Prunus persica HOM05D001129 ORTHO05D003814 5.3e-09 64.3 65 43.1
A10p05450 Brassica napus HOM05D001129 ORTHO05D003814 6.9e-09 63.9 65 40.0
BraA10t42809Z Brassica rapa HOM05D001129 ORTHO05D003814 6.9e-09 63.9 65 40.0
RcHm_v2.0_Chr5g0072781 Rosa chinensis HOM05D001129 ORTHO05D003814 6.9e-09 63.9 65 43.1
Aa31LG1G7970 Aethionema arabicum HOM05D001129 ORTHO05D003814 9.1e-09 63.5 65 43.1
BcaC07g42040 Brassica carinata HOM05D001129 ORTHO05D003814 9.1e-09 63.5 68 39.7
DCAR_004800 Daucus carota HOM05D001129 ORTHO05D003814 9.1e-09 63.5 66 45.5
C05p05030 Brassica napus HOM05D001129 ORTHO05D003814 1.2e-08 63.2 65 41.5
Eucgr.B04025 Eucalyptus grandis HOM05D001129 ORTHO05D003814 1.2e-08 63.2 66 47.0
FAN04G0733 Fragaria x ananassa HOM05D001129 ORTHO05D003814 2.0e-08 62.4 65 43.1
FAN13G0243 Fragaria x ananassa HOM05D001129 ORTHO05D003814 2.0e-08 62.4 65 43.1
Medtr5g095180 Medicago truncatula HOM05D001129 ORTHO05D003814 2.0e-08 62.4 65 41.5
Sc06g0008100 Simmondsia chinensis HOM05D001129 ORTHO05D003814 2.0e-08 62.4 65 43.1
Nn2g10322 Nelumbo nucifera HOM05D001129 ORTHO05D003814 2.6e-08 62.0 59 50.8
RcHm_v2.0_Chr7g0202261 Rosa chinensis HOM05D001129 ORTHO05D003814 2.6e-08 62.0 65 41.5
FAN16G0023 Fragaria x ananassa HOM05D001129 ORTHO05D003814 3.4e-08 61.6 59 47.5
RcHm_v2.0_Chr1g0322401 Rosa chinensis HOM05D001129 ORTHO05D003814 3.4e-08 61.6 65 44.6
FvH4_5g00310 Fragaria vesca HOM05D001129 ORTHO05D003814 5.9e-08 60.8 65 41.5
FAN08G0077 Fragaria x ananassa HOM05D001129 ORTHO05D003814 5.9e-08 60.8 65 41.5
THA.LOC104800786 Tarenaya hassleriana HOM05D001129 ORTHO05D003814 7.7e-08 60.5 65 40.0
RcHm_v2.0_Chr1g0333951 Rosa chinensis HOM05D001129 ORTHO05D003814 1.0e-07 60.1 65 41.5
Hund05051 Selenicereus undatus HOM05D001129 ORTHO05D003814 2.2e-07 58.9 66 40.9
Cpa.g.sc2.304 Carica papaya HOM05D001129 ORTHO05D003814 1.1e-06 56.6 47 51.1
Os03g0336300 Oryza sativa ssp. japonica HOM05D001129 ORTHO05D003814 1.1e-06 56.6 62 38.7
RcHm_v2.0_Chr1g0333871 Rosa chinensis HOM05D001129 ORTHO05D003814 1.1e-06 56.6 77 37.7
Zm00001eb395090 Zea mays HOM05D001129 ORTHO05D003814 1.1e-06 56.6 63 36.5
unitig_747.g21448 Utricularia gibba HOM05D001129 ORTHO05D003814 2.5e-06 55.5 58 44.8
RcHm_v2.0_Chr5g0073041 Rosa chinensis HOM05D001129 ORTHO05D003814 4.2e-06 54.7 65 38.5
FAN18G3567 Fragaria x ananassa HOM05D001129 ORTHO05D003814 7.2e-06 53.9 67 32.8
FAN21G2900 Fragaria x ananassa HOM05D001129 ORTHO05D003814 7.2e-06 53.9 65 38.5


User provided reference genes

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