Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 3.6e-227 791.2 385 100.0
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 7.3e-204 713.8 366 93.2
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 8.4e-200 700.3 364 90.9
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 2.8e-195 685.3 365 89.3
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 2.8e-195 685.3 365 89.3
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 1.5e-193 679.5 361 89.8
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 2.2e-192 675.6 373 87.1
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 2.2e-192 675.6 361 89.2
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 8.4e-192 673.7 364 88.5
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 2.1e-190 669.1 358 88.3
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 1.0e-189 666.8 367 88.3
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 7.3e-188 660.6 360 87.5
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 1.3e-187 659.8 364 86.0
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 3.6e-187 658.3 354 87.3
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 4.8e-187 657.9 363 86.2
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.8e-186 656.0 355 87.0
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 6.9e-186 654.1 375 85.1
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 9.0e-186 653.7 359 86.1
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 1.2e-185 653.3 363 86.5
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 1.3e-184 649.8 358 85.5
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 2.9e-184 648.7 358 85.8
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 3.8e-184 648.3 357 84.6
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 3.8e-184 648.3 358 86.0
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 6.4e-184 647.5 358 85.2
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 1.1e-183 646.7 356 85.4
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 1.1e-183 646.7 357 86.0
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.9e-183 646.0 357 85.2
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 1.9e-183 646.0 356 85.4
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 2.4e-183 645.6 358 85.5
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 9.3e-183 643.7 362 85.1
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 2.1e-182 642.5 357 83.8
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 3.5e-182 641.7 357 85.2
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 4.6e-182 641.3 358 84.6
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 4.6e-182 641.3 371 83.8
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 6.0e-182 641.0 357 85.4
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 7.9e-182 640.6 358 84.4
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 1.0e-181 640.2 360 85.0
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 1.3e-181 639.8 367 82.8
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.3e-181 639.8 358 83.8
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 1.3e-181 639.8 364 83.5
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.8e-181 639.4 358 83.5
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 2.3e-181 639.0 356 84.8
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 3.9e-181 638.3 356 84.6
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 3.9e-181 638.3 358 83.8
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 3.9e-181 638.3 354 84.2
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.1e-180 636.7 356 84.8
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.5e-180 636.3 358 83.8
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 3.3e-180 635.2 356 83.7
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 3.3e-180 635.2 357 83.8
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 5.6e-180 634.4 356 83.1
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 5.6e-180 634.4 356 83.1
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 9.6e-180 633.6 379 81.0
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 1.3e-179 633.3 358 84.1
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 1.3e-179 633.3 358 83.2
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 3.6e-179 631.7 372 81.7
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 6.2e-179 630.9 358 83.2
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.1e-178 630.2 358 83.2
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.1e-178 630.2 354 83.9
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 1.4e-178 629.8 357 83.5
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 2.4e-178 629.0 356 82.3
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 3.1e-178 628.6 363 82.1
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 4.0e-178 628.2 363 80.2
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 5.3e-178 627.9 366 82.0
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 6.9e-178 627.5 357 83.2
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 6.9e-178 627.5 362 81.2
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 9.0e-178 627.1 364 81.3
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 4.5e-177 624.8 356 82.6
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 7.6e-177 624.0 356 83.7
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 9.9e-177 623.6 358 81.3
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 8.4e-176 620.5 353 82.4
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.4e-175 619.8 357 81.8
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.4e-175 619.8 368 79.6
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.9e-175 619.4 358 82.4
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 1.9e-175 619.4 357 81.8
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 2.4e-175 619.0 363 81.5
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 3.2e-175 618.6 357 81.8
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 4.2e-175 618.2 357 82.4
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 4.2e-175 618.2 353 81.3
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 4.2e-175 618.2 367 79.8
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 7.1e-175 617.5 357 81.8
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 1.6e-174 616.3 354 81.6
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 3.5e-174 615.1 365 80.0
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 4.6e-174 614.8 359 80.8
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 1.0e-173 613.6 364 79.7
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 3.9e-173 611.7 367 79.8
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 5.1e-173 611.3 359 79.9
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 1.5e-172 609.8 370 79.7
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 3.3e-172 608.6 352 80.4
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 2.1e-171 605.9 362 77.9
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.0e-170 601.7 367 78.5
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 9.0e-170 600.5 383 76.0
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 1.2e-169 600.1 375 74.9
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.6e-169 599.0 369 78.6
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 4.5e-169 598.2 370 77.8
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.0e-168 597.0 378 75.9
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.1e-167 593.6 341 81.5
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.4e-167 593.2 368 78.0
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 3.2e-167 592.0 352 80.7
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 5.5e-167 591.3 364 77.7
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 3.0e-165 585.5 358 77.9
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 3.9e-165 585.1 382 74.6
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 8.7e-165 583.9 358 76.0
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 8.2e-163 577.4 358 78.2
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.4e-162 575.9 351 77.2
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 4.1e-162 575.1 360 75.3
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 9.0e-162 573.9 362 74.6
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 2.0e-161 572.8 362 74.6
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 2.0e-161 572.8 347 78.1
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 4.2e-159 565.1 354 76.3
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 9.3e-159 563.9 358 76.8
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 6.7e-157 557.8 358 75.7
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.2e-155 552.7 347 74.9
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.8e-155 552.4 359 74.9
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 6.3e-155 551.2 295 87.8
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.4e-154 549.3 350 73.4
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.6e-153 545.8 357 74.5
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.0e-152 543.9 356 70.8
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 1.7e-152 543.1 354 74.0
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.2e-152 542.7 357 73.4
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 2.9e-152 542.3 353 71.1
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 1.2e-150 537.0 349 71.1
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 2.7e-150 535.8 371 69.5
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 6.7e-149 531.2 331 72.5
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 8.8e-149 530.8 365 72.9
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 8.8e-149 530.8 443 61.9
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 6.3e-147 524.6 357 72.0
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 7.7e-145 517.7 279 86.4
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.4e-138 496.9 406 59.6
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.5e-137 491.9 290 78.6
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 4.0e-133 478.8 335 66.6
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 9.7e-132 474.2 362 65.5
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.3e-131 473.8 351 63.5
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 6.3e-131 471.5 239 91.2
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.5e-128 461.1 335 62.7
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 1.0e-125 454.1 720 39.7
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 2.6e-124 449.5 316 66.1
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 5.7e-116 421.8 266 75.2
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 6.8e-109 398.3 369 53.7
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.0e-105 386.7 239 75.7
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 4.7e-102 375.6 334 58.7
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 1.2e-94 350.9 220 74.1
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 3.1e-93 346.3 251 64.9
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.0e-93 345.9 331 53.8
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 6.2e-86 322.0 202 75.7
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.6e-84 316.6 289 58.5
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 1.2e-49 201.4 142 70.4
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 1.1e-47 194.9 100 93.0
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 3.7e-46 189.9 125 76.0
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 6.3e-46 189.1 125 75.2
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 8.2e-46 188.7 117 81.2
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 8.2e-46 188.7 125 75.2
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 6.5e-43 179.1 97 90.7
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 6.5e-43 179.1 124 71.8
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.1e-41 174.1 113 74.3
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.9e-40 169.9 171 50.3
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.1e-37 159.8 98 73.5
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 2.6e-36 157.1 133 60.9
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 5.1e-32 142.9 123 60.2
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.7e-30 137.9 111 60.4
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 1.0e-24 118.6 69 81.2
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.3e-24 117.5 65 84.6
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 8.8e-24 115.5 71 77.5
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 4.4e-23 113.2 64 84.4
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 7.2e-18 95.9 71 63.4
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.0e-16 92.0 61 73.8
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 1.0e-16 92.0 84 56.0
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 3.7e-14 83.6 124 44.4
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.8e-13 81.3 49 71.4
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 5.3e-13 79.7 67 58.2
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 9.4e-10 68.9 41 80.5
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 4.8e-06 56.6 31 83.9


User provided reference genes

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