Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.7e-73 279.3 144 100.0
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 3.7e-68 261.5 146 93.8
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 2.9e-65 251.9 144 91.0
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 6.5e-65 250.8 146 91.8
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 3.3e-64 248.4 144 88.9
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.6e-63 246.1 144 86.8
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 4.7e-63 244.6 144 86.8
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.4e-62 243.0 142 85.9
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 1.4e-62 243.0 142 85.9
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.3e-62 242.3 144 86.1
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 5.2e-62 241.1 146 86.3
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 1.5e-61 239.6 144 84.7
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 2.0e-61 239.2 144 86.1
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 2.6e-61 238.8 144 86.1
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.6e-61 238.8 144 85.4
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 5.7e-61 237.7 142 84.5
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 9.8e-61 236.9 145 84.1
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 9.8e-61 236.9 144 85.4
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.3e-60 236.5 144 85.4
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.7e-60 236.1 144 84.0
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 2.2e-60 235.7 144 85.4
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 2.8e-60 235.3 142 85.2
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.8e-60 235.3 144 84.7
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 2.8e-60 235.3 140 85.7
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 8.3e-60 233.8 144 84.0
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.4e-59 233.0 141 85.1
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 1.4e-59 233.0 145 83.4
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.8e-59 232.6 143 84.6
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 3.1e-59 231.9 144 84.0
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 3.1e-59 231.9 144 84.0
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 3.1e-59 231.9 145 82.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 4.1e-59 231.5 144 84.0
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.1e-59 231.5 145 84.8
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 4.1e-59 231.5 145 83.4
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 4.1e-59 231.5 157 77.7
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 5.4e-59 231.1 145 84.8
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 7.0e-59 230.7 145 82.1
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 7.0e-59 230.7 144 83.3
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 9.2e-59 230.3 144 83.3
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 9.2e-59 230.3 144 82.6
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 1.6e-58 229.6 145 81.4
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 1.6e-58 229.6 144 82.6
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.6e-58 229.6 145 84.1
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.6e-58 229.6 145 84.1
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 1.6e-58 229.6 142 83.8
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 2.0e-58 229.2 145 81.4
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 81.4
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 81.4
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 81.4
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 81.4
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 81.4
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 81.4
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 3.5e-58 228.4 145 81.4
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 4.5e-58 228.0 145 80.7
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 4.5e-58 228.0 145 80.7
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 4.5e-58 228.0 134 87.3
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 4.5e-58 228.0 144 84.7
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 5.9e-58 227.6 145 80.7
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 5.9e-58 227.6 145 80.7
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 5.9e-58 227.6 145 80.7
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 5.9e-58 227.6 144 84.7
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 7.8e-58 227.3 145 80.7
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.0e-57 226.9 145 80.7
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 1.0e-57 226.9 145 80.0
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.3e-57 226.5 145 80.0
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.3e-57 226.5 145 80.7
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 1.7e-57 226.1 145 81.4
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 2.9e-57 225.3 145 81.4
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 6.6e-57 224.2 145 80.0
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 6.6e-57 224.2 132 87.9
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 8.6e-57 223.8 145 80.7
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 8.6e-57 223.8 145 79.3
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.5e-56 223.0 144 83.3
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 1.5e-56 223.0 144 80.6
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 3.3e-56 221.9 144 82.6
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 4.3e-56 221.5 145 82.1
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 4.3e-56 221.5 144 81.2
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 5.6e-56 221.1 132 84.8
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 7.3e-56 220.7 145 80.7
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.2e-55 219.9 130 86.2
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.2e-55 219.9 142 81.7
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 2.1e-55 219.2 144 81.2
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 4.7e-55 218.0 130 86.2
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.7e-55 218.0 141 78.7
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.4e-54 216.5 146 81.5
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 1.8e-54 216.1 144 81.2
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 2.3e-54 215.7 146 79.5
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 2.3e-54 215.7 144 79.2
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 4.0e-54 214.9 146 78.1
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 8.9e-54 213.8 146 80.1
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 1.2e-53 213.4 146 80.1
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.2e-53 213.4 145 80.0
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 2.0e-53 212.6 146 80.1
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 3.4e-53 211.8 145 79.3
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 4.4e-53 211.5 145 79.3
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 4.4e-53 211.5 144 79.9
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 5.8e-53 211.1 145 77.9
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 5.8e-53 211.1 145 77.9
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 9.8e-53 210.3 146 78.1
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 9.8e-53 210.3 147 78.2
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 9.8e-53 210.3 142 78.9
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 2.2e-52 209.1 144 77.8
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 3.7e-52 208.4 144 80.6
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 3.7e-52 208.4 142 79.6
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 4.9e-52 208.0 144 77.1
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 6.4e-52 207.6 201 60.2
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 6.4e-52 207.6 145 77.9
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 8.3e-52 207.2 145 77.2
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 8.3e-52 207.2 145 79.3
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 8.3e-52 207.2 145 79.3
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 1.1e-51 206.8 146 76.7
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.8e-51 206.1 147 78.2
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 3.2e-51 205.3 144 77.1
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 3.2e-51 205.3 131 81.7
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 3.2e-51 205.3 145 78.6
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.2e-50 203.4 146 76.7
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 2.7e-50 202.2 143 78.3
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 3.5e-50 201.8 128 83.6
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 7.8e-50 200.7 135 80.0
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.0e-49 200.3 144 78.5
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 3.0e-49 198.7 149 76.5
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 3.3e-48 195.3 143 75.5
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 5.6e-48 194.5 147 73.5
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 9.5e-48 193.7 182 64.3
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 1.2e-47 193.4 144 75.0
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.6e-47 193.0 150 72.7
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 2.1e-47 192.6 147 72.8
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.1e-46 190.3 145 75.2
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.1e-46 190.3 140 75.0
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 1.4e-46 189.9 146 75.3
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 1.4e-46 189.9 146 75.3
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 1.4e-46 189.9 146 75.3
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 1.2e-45 186.8 145 74.5
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.0e-45 186.0 169 66.3
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.6e-45 185.7 144 73.6
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 2.2e-44 182.6 120 81.7
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 8.3e-44 180.6 130 76.2
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.1e-43 180.3 145 73.1
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 1.1e-43 180.3 142 72.5
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 2.1e-42 176.0 95 88.4
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 3.5e-42 175.3 144 69.4
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 4.6e-42 174.9 144 70.1
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.3e-41 173.3 144 68.8
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 1.3e-41 173.3 146 71.2
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.0e-41 172.2 133 72.9
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 6.6e-41 171.0 132 73.5
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 8.6e-41 170.6 147 67.3
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 4.3e-40 168.3 136 74.3
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 9.5e-40 167.2 140 70.0
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 9.5e-40 167.2 124 76.6
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 4.7e-39 164.9 91 89.0
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 1.4e-38 163.3 120 77.5
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 1.8e-38 162.9 145 68.3
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.8e-38 161.0 122 76.2
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 2.0e-37 159.5 132 67.4
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 7.5e-37 157.5 115 73.9
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 1.3e-33 146.7 113 73.5
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 1.3e-33 146.7 122 71.3
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 8.6e-33 144.1 142 59.2
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 1.5e-32 143.3 103 76.7
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 5.6e-32 141.4 111 69.4
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 5.6e-32 141.4 82 81.7
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 8.1e-31 137.5 98 77.6
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 1.7e-28 129.8 132 59.8
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 6.4e-28 127.9 132 59.8
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 6.0e-26 121.3 119 62.2
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 6.0e-26 121.3 119 62.2
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 7.8e-26 120.9 69 82.6
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.0e-25 119.0 64 89.1
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-24 117.1 132 54.5
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.5e-24 116.7 106 68.9
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 4.3e-24 115.2 132 55.3
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 2.8e-23 112.5 99 69.7
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.2e-23 111.3 144 52.1
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 6.9e-22 107.8 80 72.5
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 2.6e-21 105.9 77 72.7
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 3.4e-21 105.5 76 73.7
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 4.9e-20 101.7 98 59.2
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 2.3e-17 92.8 45 91.1
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 1.9e-16 89.7 82 64.6
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 4.0e-14 82.0 76 64.5
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3


User provided reference genes

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