Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38270 Trifolium pratense HOM05D002984 ORTHO05D003561 3.7e-103 378.3 198 100.0
TPR.G38317 Trifolium pratense HOM05D002984 ORTHO05D003561 9.3e-86 320.5 242 74.8
Ca_19808_v3 Cicer arietinum L. HOM05D002984 ORTHO05D003561 7.3e-75 284.3 245 67.8
Medtr5g054680 Medicago truncatula HOM05D002984 ORTHO05D003561 3.6e-74 282.0 240 68.8
Psat2g101040 Pisum sativum HOM05D002984 ORTHO05D003561 3.4e-72 275.4 242 67.4
Lj2g0026621 Lotus japonicus HOM05D002984 ORTHO05D003561 2.7e-69 265.8 246 64.6
Glyma.01G086201 Glycine max HOM05D002984 ORTHO05D003561 3.0e-68 262.3 245 64.9
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 6.7e-68 261.2 240 65.0
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 1.4e-65 253.4 245 62.0
arahy.Tifrunner.gnm1.ann1.IQF6NS Arachis hypogaea HOM05D002984 ORTHO05D003561 2.6e-64 249.2 246 61.0
arahy.Tifrunner.gnm1.ann1.X8TPQJ Arachis hypogaea HOM05D002984 ORTHO05D003561 2.6e-64 249.2 246 61.0
Lalb_Chr17g0341951 Lupinus albus HOM05D002984 ORTHO05D003561 2.9e-63 245.7 245 60.4
Lj2g0022832 Lotus japonicus HOM05D002984 ORTHO05D003561 2.6e-56 222.6 246 56.1
Lj2g0024103 Lotus japonicus HOM05D002984 ORTHO05D003561 7.6e-56 221.1 246 56.5
VMungo1215G2122 Vigna mungo HOM05D002984 ORTHO05D003561 3.8e-55 218.8 241 56.0
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 7.2e-54 214.5 246 54.5
Lalb_Chr10g0099841 Lupinus albus HOM05D002984 ORTHO05D003561 5.1e-52 208.4 211 61.1
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 1.5e-51 206.8 246 53.7
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 3.3e-51 205.7 246 54.1
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 9.7e-51 204.1 246 53.3
Rhsim09G0111200 Rhododendron simsii HOM05D002984 ORTHO05D000550 6.3e-50 201.4 235 53.6
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 1.8e-49 199.9 234 53.0
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 3.1e-49 199.1 247 50.6
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 2.6e-48 196.1 246 51.2
CSS0018296 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 1.7e-47 193.4 246 51.2
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 1.7e-47 193.4 235 53.2
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 5.0e-47 191.8 243 52.7
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 5.0e-47 191.8 247 52.2
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 6.5e-47 191.4 247 51.8
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 6.5e-47 191.4 236 50.8
TAR622G0040 Trochodendron aralioides HOM05D002984 ORTHO05D003561 1.1e-46 190.7 248 49.6
Gorai.013G080300 Gossypium raimondii HOM05D002984 ORTHO05D003561 1.4e-46 190.3 246 52.0
Gohir.D13G070100 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.5e-46 189.5 246 52.4
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 3.2e-46 189.1 244 51.2
CsaV3_5G034050 Cucumis sativus L. HOM05D002984 ORTHO05D003561 3.2e-46 189.1 244 51.2
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 4.2e-46 188.7 246 50.4
ClCG05G022960 Citrullus lanatus HOM05D002984 ORTHO05D000550 4.2e-46 188.7 242 52.1
Dinv21122 Davidia involucrata HOM05D002984 ORTHO05D003561 4.2e-46 188.7 242 50.0
MD16G1046800 Malus domestica HOM05D002984 ORTHO05D003561 5.5e-46 188.3 232 52.2
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 7.2e-46 188.0 246 51.2
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 1.6e-45 186.8 251 49.0
CiPaw.16G003900 Carya illinoinensis HOM05D002984 ORTHO05D003561 4.6e-45 185.3 246 50.0
Gohir.A13G053428 Gossypium hirsutum HOM05D002984 ORTHO05D003561 8.8e-44 181.0 246 50.4
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 8.8e-44 181.0 206 53.4
COL.COLO4_07881 Corchorus olitorius HOM05D002984 ORTHO05D003561 1.1e-43 180.6 246 50.0
MD16G1047200 Malus domestica HOM05D002984 ORTHO05D003561 1.5e-43 180.3 243 49.8
Psat7g129560 Pisum sativum HOM05D002984 ORTHO05D003561 2.5e-43 179.5 256 51.2
Cpa.g.sc1.211 Carica papaya HOM05D002984 ORTHO05D003561 3.3e-43 179.1 246 48.8
Eucgr.D01061 Eucalyptus grandis HOM05D002984 ORTHO05D003561 4.3e-43 178.7 247 48.6
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 5.7e-43 178.3 225 53.3
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 9.7e-43 177.6 254 48.4
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 1.7e-42 176.8 231 51.1
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 1.7e-42 176.8 231 51.1
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 1.7e-42 176.8 201 54.7
Sed0009737 Sechium edule HOM05D002984 ORTHO05D003561 2.4e-41 172.9 244 49.2
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 1.5e-40 170.2 244 49.2
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 1.5e-40 170.2 245 49.0
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 2.6e-40 169.5 244 49.2
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 2.6e-40 169.5 234 49.1
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 1.3e-39 167.2 253 43.9
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 2.9e-39 166.0 252 46.4
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 1.4e-38 163.7 235 49.8
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 5.5e-38 161.8 254 47.6
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.7e-37 159.5 235 48.5
Sabra02G0035000 Salix brachista HOM05D002984 ORTHO05D003561 3.6e-37 159.1 253 47.0
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 6.1e-37 158.3 254 46.5
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 1.4e-36 157.1 246 47.6
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 5.1e-36 155.2 244 47.1
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 8.8e-36 154.5 234 45.7
AUR62002298 Chenopodium quinoa HOM05D002984 ORTHO05D003561 3.3e-35 152.5 243 46.1
MBI01_g09372_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 2.8e-34 149.4 231 44.2
A09p39560 Brassica napus HOM05D002984 ORTHO05D003561 3.7e-34 149.1 226 46.5
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 3.7e-34 149.1 226 46.5
AUR62015392 Chenopodium quinoa HOM05D002984 ORTHO05D003561 3.7e-34 149.1 243 45.3
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 1.1e-33 147.5 246 43.9
Sc25g0002400 Simmondsia chinensis HOM05D002984 ORTHO05D003561 3.1e-33 146.0 242 45.0
THA.LOC104821957 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 3.1e-33 146.0 232 44.0
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 5.3e-33 145.2 248 43.5
C05p24920 Brassica napus HOM05D002984 ORTHO05D003561 9.1e-33 144.4 233 43.3
Hund03157 Selenicereus undatus HOM05D002984 ORTHO05D003561 2.0e-32 143.3 241 44.4
Aa31LG7G8960 Aethionema arabicum HOM05D002984 ORTHO05D003561 1.3e-31 140.6 231 43.7
Psat5g020480 Pisum sativum HOM05D002984 ORTHO05D001752 2.2e-31 139.8 104 76.9
Nitab4.5_0000597g0030 Nicotiana tabacum HOM05D002984 ORTHO05D003561 2.9e-31 139.4 238 42.4
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 1.9e-30 136.7 227 42.7
Sp1g22670 Schrenkiella parvula HOM05D002984 ORTHO05D003561 2.5e-30 136.3 202 46.5
CARHR025920 Cardamine hirsuta HOM05D002984 ORTHO05D003561 4.2e-30 135.6 202 45.5
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 9.4e-30 134.4 201 45.8
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 1.2e-29 134.0 244 42.6
Thhalv10006778m.g Eutrema salsugineum HOM05D002984 ORTHO05D003561 2.1e-29 133.3 198 48.0
Nitab4.5_0000489g0040 Nicotiana tabacum HOM05D002984 ORTHO05D003561 6.1e-29 131.7 233 42.5
ATR0681G393 Amborella trichopoda HOM05D002984 ORTHO05D003561 2.3e-28 129.8 240 41.2
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 3.0e-28 129.4 238 42.9
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 5.2e-28 128.6 243 39.9
Peaxi162Scf00004g01518 Petunia axillaris HOM05D002984 ORTHO05D003561 5.2e-28 128.6 242 42.1
THA.LOC104808226 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 5.2e-28 128.6 226 42.0
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 1.1e-27 127.5 242 40.9
AT1G25540 Arabidopsis thaliana HOM05D002984 ORTHO05D003561 1.5e-27 127.1 203 44.8
AL1G39760 Arabidopsis lyrata HOM05D002984 ORTHO05D003561 3.3e-27 125.9 203 45.3
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 4.4e-27 125.6 202 44.6
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 4.4e-27 125.6 202 44.6
BolC3t19582H Brassica oleracea HOM05D002984 ORTHO05D003561 4.4e-27 125.6 202 44.6
PGR142G1725 Punica granatum HOM05D002984 ORTHO05D003561 4.4e-27 125.6 233 45.5
Ah.13g072880 Amaranthus hybridus HOM05D002984 ORTHO05D003561 6.3e-26 121.7 240 38.3
BraA08t34651Z Brassica rapa HOM05D002984 ORTHO05D003561 6.3e-26 121.7 202 43.1
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 6.3e-26 121.7 228 43.4
PGR142G0084 Punica granatum HOM05D002984 ORTHO05D003561 1.1e-25 120.9 197 48.7
Psat5g193280 Pisum sativum HOM05D000237 ORTHO05D021556 1.8e-25 120.2 81 84.0
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 2.4e-25 119.8 202 42.6
BcaC05g26443 Brassica carinata HOM05D002984 ORTHO05D003561 7.0e-25 118.2 202 41.6
BolC5t31221H Brassica oleracea HOM05D002984 ORTHO05D003561 7.0e-25 118.2 202 41.6
CDE08G0495 Ceratophyllum demersum HOM05D002984 ORTHO05D003561 1.2e-24 117.5 246 39.0
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 1.2e-24 117.5 211 42.2
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 2.0e-24 116.7 221 41.2
BcaC05g26654 Brassica carinata HOM05D002984 ORTHO05D003561 2.9e-23 112.8 188 44.7
FAN12G2547 Fragaria x ananassa HOM05D002984 ORTHO05D003561 3.6e-21 105.9 145 53.1
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.8e-20 103.6 226 36.3
PSO017G3087 Papaver somniferum HOM05D002984 ORTHO05D003561 1.5e-19 100.5 126 52.4
SHI14503 Sapria himalayana HOM05D002984 ORTHO05D003561 1.7e-18 97.1 240 36.7
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 2.8e-18 96.3 106 57.5
vmacro10537 Vaccinium macrocarpon HOM05D002984 ORTHO05D003561 1.1e-17 94.4 86 64.0
Nitab4.5_0000672g0090 Nicotiana tabacum HOM05D002984 ORTHO05D003561 1.8e-17 93.6 224 37.9
Nitab4.5_0005194g0020 Nicotiana tabacum HOM05D002984 ORTHO05D003561 7.0e-17 91.7 224 37.9
SGA_v2.0_scaffold124G33581 Striga asiatica HOM05D002984 ORTHO05D003561 9.1e-17 91.3 211 37.4
Lsat_1_v5_gn_5_57541 Lactuca sativa HOM05D002984 ORTHO05D003561 2.2e-15 86.7 172 43.6
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 7.2e-14 81.6 197 37.1
VMungo0464G0817 Vigna mungo HOM05D002984 ORTHO05D003561 2.7e-13 79.7 103 53.4
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 1.4e-12 77.4 192 35.4
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 1.5e-11 73.9 247 29.6
HanXRQChr17g0552241 Helianthus annuus HOM05D002984 ORTHO05D003561 4.5e-08 62.4 155 39.4
PSO339G2630 Papaver somniferum HOM05D002984 ORTHO05D003561 5.9e-08 62.0 81 50.6
BcaB03g12090 Brassica carinata HOM05D002984 ORTHO05D003561 7.7e-08 61.6 45 64.4
Psat1g103240 Pisum sativum HOM05D003523 ORTHO05D001752 2.3e-07 60.1 78 51.3
CAN.G674.44 Capsicum annuum HOM05D002984 ORTHO05D003561 3.3e-06 56.2 221 31.7


User provided reference genes

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