Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 2.8e-118 428.7 227 100.0
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 1.6e-110 402.9 227 93.0
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 2.8e-110 402.1 227 92.5
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 6.8e-109 397.5 227 93.0
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 1.2e-105 386.7 227 89.0
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 2.7e-105 385.6 227 88.5
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 6.0e-105 384.4 225 89.3
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 6.0e-105 384.4 225 89.3
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 6.0e-105 384.4 225 89.3
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 3.0e-104 382.1 227 87.2
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 1.9e-103 379.4 227 86.8
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 2.6e-100 369.0 228 86.0
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 1.1e-98 363.6 228 84.6
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 3.3e-95 352.1 227 80.2
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 3.3e-95 352.1 226 81.0
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 3.3e-95 352.1 225 80.4
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.1e-93 347.1 227 79.7
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 1.4e-93 346.7 227 78.9
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 4.0e-93 345.1 224 79.5
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 9.0e-93 344.0 227 79.3
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 2.0e-92 342.8 227 77.1
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 4.4e-92 341.7 227 78.0
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 5.8e-92 341.3 227 78.4
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.7e-91 339.7 227 78.4
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 2.9e-91 339.0 227 77.1
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 3.8e-91 338.6 227 78.0
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 6.4e-91 337.8 227 75.3
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 6.4e-91 337.8 227 78.0
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 8.4e-91 337.4 227 77.5
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 8.4e-91 337.4 227 77.5
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 1.9e-90 336.3 227 76.7
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 2.4e-90 335.9 227 76.7
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 2.4e-90 335.9 225 76.9
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 3.2e-90 335.5 227 77.1
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 5.4e-90 334.7 218 81.2
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 9.3e-90 334.0 227 75.3
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 1.2e-89 333.6 227 76.2
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 2.1e-89 332.8 227 75.8
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 6.0e-89 331.3 221 77.4
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 3.9e-88 328.6 227 75.8
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 5.1e-88 328.2 225 75.6
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 6.6e-88 327.8 224 74.6
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 1.1e-87 327.0 227 74.9
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 1.5e-87 326.6 227 74.4
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 5.6e-87 324.7 227 74.4
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 7.3e-87 324.3 237 70.9
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 9.6e-87 323.9 227 74.0
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 9.6e-87 323.9 227 75.3
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 1.6e-86 323.2 224 73.2
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 4.8e-86 321.6 227 74.4
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 6.2e-86 321.2 225 73.3
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 1.4e-85 320.1 227 72.7
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 2.4e-85 319.3 210 78.1
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 3.1e-85 318.9 224 71.4
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 3.1e-85 318.9 227 71.8
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 3.1e-85 318.9 227 71.8
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 4.0e-85 318.5 227 73.1
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 5.3e-85 318.2 242 71.1
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 1.2e-84 317.0 227 72.7
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 2.0e-84 316.2 227 71.8
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 2.6e-84 315.8 267 64.4
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 4.5e-84 315.1 224 72.8
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 9.9e-84 313.9 227 71.4
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 1.7e-83 313.2 225 72.9
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 1.7e-83 313.2 227 71.8
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 4.9e-83 311.6 221 73.3
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 4.9e-83 311.6 225 73.3
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 1.1e-82 310.5 227 71.4
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 1.4e-82 310.1 224 71.0
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 2.4e-82 309.3 224 71.0
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 4.2e-82 308.5 260 64.6
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 7.1e-82 307.8 227 70.5
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 7.1e-82 307.8 227 70.5
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.1e-81 306.2 250 64.4
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 3.5e-81 305.4 227 70.0
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 3.5e-81 305.4 227 70.0
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 3.5e-81 305.4 227 70.0
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 3.5e-81 305.4 207 76.3
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 4.6e-81 305.1 227 70.5
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.3e-80 303.5 234 69.7
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 1.9e-79 299.7 225 70.7
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.9e-79 299.7 203 75.9
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 3.3e-79 298.9 210 73.3
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 9.6e-79 297.4 227 70.0
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 9.6e-79 297.4 224 71.0
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 3.7e-78 295.4 241 67.2
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 1.8e-77 293.1 224 70.1
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 4.0e-77 292.0 224 68.8
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 5.3e-77 291.6 227 69.6
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 5.8e-76 288.1 194 78.4
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 6.5e-75 284.6 227 65.6
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 3.2e-74 282.3 227 67.0
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 1.2e-73 280.4 227 65.6
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 1.5e-71 273.5 195 74.4
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 5.8e-68 261.5 213 65.7
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 3.8e-67 258.8 214 63.1
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 2.5e-66 256.1 222 60.8
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 5.5e-66 255.0 222 60.4
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 5.5e-66 255.0 222 60.4
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 7.1e-66 254.6 207 63.8
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 1.2e-65 253.8 193 68.4
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 2.3e-64 249.6 222 59.5
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 3.4e-60 235.7 223 57.0
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 2.2e-59 233.0 215 55.8
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 6.7e-56 221.5 207 54.6
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 2.5e-50 203.0 213 51.2
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 1.5e-47 193.7 159 67.9
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 2.6e-47 193.0 139 71.2
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 3.2e-42 176.0 196 47.4
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 1.7e-38 163.7 210 49.0
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.3e-30 137.5 163 53.4
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 5.4e-29 132.1 95 68.4
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.6e-28 130.6 99 70.7
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 3.6e-17 92.8 220 29.1
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 4.0e-16 89.4 194 31.4
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 6.6e-11 72.0 210 33.8
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 1.1e-10 71.2 225 28.0
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 1.6e-09 67.4 105 47.6
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 8.9e-08 61.6 35 80.0


User provided reference genes

Program Settings