Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G382 Trifolium pratense HOM05D004931 ORTHO05D006579 1.0e-50 203.0 95 100.0
TPR.G19613 Trifolium pratense HOM05D004931 ORTHO05D006579 2.0e-46 188.7 91 96.7
TPR.G19900 Trifolium pratense HOM05D004931 ORTHO05D006579 6.5e-45 183.7 95 93.7
Medtr2g011420 Medicago truncatula HOM05D004931 ORTHO05D006579 1.6e-43 179.1 91 92.3
Ca_00224_v3 Cicer arietinum L. HOM05D004931 ORTHO05D006579 2.8e-40 168.3 88 89.8
Psat1g210240 Pisum sativum HOM05D004931 ORTHO05D006579 1.3e-37 159.5 91 82.4
Lj6g0004184 Lotus japonicus HOM05D004931 ORTHO05D006579 7.2e-36 153.7 86 86.0
arahy.Tifrunner.gnm1.ann1.BF7HNV Arachis hypogaea HOM05D004931 ORTHO05D006579 1.6e-35 152.5 86 80.2
arahy.Tifrunner.gnm1.ann1.Q671IP Arachis hypogaea HOM05D004931 ORTHO05D006579 1.6e-35 152.5 86 80.2
Gohir.D02G175400 Gossypium hirsutum HOM05D004931 ORTHO05D006579 2.1e-35 152.1 83 84.3
VMungo0540G0694 Vigna mungo HOM05D004931 ORTHO05D006579 2.1e-35 152.1 83 84.3
Glyma.13G248100 Glycine max HOM05D004931 ORTHO05D006579 4.7e-35 151.0 83 84.3
Gohir.A03G152300 Gossypium hirsutum HOM05D004931 ORTHO05D006579 1.4e-34 149.4 83 83.1
Phvul.006G193900 Phaseolus vulgaris HOM05D004931 ORTHO05D006579 1.4e-34 149.4 83 83.1
Gorai.005G197000 Gossypium raimondii HOM05D004931 ORTHO05D006579 1.8e-34 149.1 83 83.1
Glyma.15G065800 Glycine max HOM05D004931 ORTHO05D006579 5.2e-34 147.5 83 81.9
Duzib132G0410 Durio zibethinus HOM05D004931 ORTHO05D006579 1.1e-33 146.4 83 80.7
COL.COLO4_21767 Corchorus olitorius HOM05D004931 ORTHO05D006579 1.5e-33 146.0 83 81.9
Actinidia34703 Actinidia chinensis HOM05D004931 ORTHO05D006579 2.0e-33 145.6 90 75.6
Ciclev10005352m.g Citrus clementina HOM05D004931 ORTHO05D006579 1.3e-32 142.9 86 76.7
Cpa.g.sc38.82 Carica papaya HOM05D004931 ORTHO05D006579 1.7e-32 142.5 83 79.5
TAR622G0753 Trochodendron aralioides HOM05D004931 ORTHO05D006579 1.7e-32 142.5 83 77.1
QL03p049374 Quercus lobata HOM05D004931 ORTHO05D006579 2.8e-32 141.7 83 79.5
TPR.G399 Trifolium pratense HOM05D004931 ORTHO05D006579 3.7e-32 141.4 91 76.9
Thecc.02G192700 Theobroma cacao HOM05D004931 ORTHO05D006579 4.8e-32 141.0 83 78.3
Dinv06619 Davidia involucrata HOM05D004931 ORTHO05D006579 8.2e-32 140.2 83 78.3
Sed0000722 Sechium edule HOM05D004931 ORTHO05D006579 1.1e-31 139.8 86 76.7
CSS0024647 Camellia sinensis var. sinensis HOM05D004931 ORTHO05D006579 1.4e-31 139.4 83 78.3
Migut.K01057 Erythranthe guttata HOM05D004931 ORTHO05D006579 1.4e-31 139.4 83 75.9
CiPaw.05G101400 Carya illinoinensis HOM05D004931 ORTHO05D006579 2.4e-31 138.7 83 78.3
Haze_12500 Corylus avellana HOM05D004931 ORTHO05D006579 4.1e-31 137.9 83 78.3
Prupe.1G215300 Prunus persica HOM05D004931 ORTHO05D006579 4.1e-31 137.9 83 77.1
Dinv02758 Davidia involucrata HOM05D004931 ORTHO05D006579 5.3e-31 137.5 83 74.7
TAR374G0634 Trochodendron aralioides HOM05D004931 ORTHO05D006579 5.3e-31 137.5 83 75.9
Cc11_g15020 Coffea canephora HOM05D004931 ORTHO05D006579 7.0e-31 137.1 87 75.9
Lsat_1_v5_gn_2_17061 Lactuca sativa HOM05D004931 ORTHO05D006579 7.0e-31 137.1 83 75.9
TWI36G0173 Tripterygium wilfordii HOM05D004931 ORTHO05D006579 1.2e-30 136.3 80 80.0
GSVIVG01001087001 Vitis vinifera HOM05D004931 ORTHO05D006579 1.2e-30 136.3 83 73.5
Atru.chr12.1413 Acer truncatum HOM05D004931 ORTHO05D006579 2.0e-30 135.6 92 68.5
MELO3C017814.2 Cucumis melo HOM05D004931 ORTHO05D006579 2.0e-30 135.6 83 77.1
CsaV3_4G002250 Cucumis sativus L. HOM05D004931 ORTHO05D006579 2.0e-30 135.6 83 77.1
Nn3g16276 Nelumbo nucifera HOM05D004931 ORTHO05D006579 2.0e-30 135.6 84 76.2
CANSAT01G2308 Cannabis sativa HOM05D004931 ORTHO05D006579 2.6e-30 135.2 86 73.3
ECA238G3692 Erigeron canadensis HOM05D004931 ORTHO05D006579 2.6e-30 135.2 83 73.5
FvH4_4g22670 Fragaria vesca HOM05D004931 ORTHO05D006579 2.6e-30 135.2 83 75.9
FAN12G1488 Fragaria x ananassa HOM05D004931 ORTHO05D006579 2.6e-30 135.2 83 75.9
FAN17G1056 Fragaria x ananassa HOM05D004931 ORTHO05D006579 2.6e-30 135.2 83 75.9
Manes.08G101500 Manihot esculenta HOM05D004931 ORTHO05D006579 4.5e-30 134.4 83 72.3
Sed0016914 Sechium edule HOM05D004931 ORTHO05D006579 4.5e-30 134.4 83 77.1
AUR62005713 Chenopodium quinoa HOM05D004931 ORTHO05D006579 5.9e-30 134.0 83 72.3
FAN07G1868 Fragaria x ananassa HOM05D004931 ORTHO05D006579 5.9e-30 134.0 83 75.9
MBI07_g35974_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 5.9e-30 134.0 83 73.5
SGA_v2.0_scaffold81G25976 Striga asiatica HOM05D004931 ORTHO05D006579 7.7e-30 133.7 83 73.5
Manes.09G188000 Manihot esculenta HOM05D004931 ORTHO05D006579 1.3e-29 132.9 83 74.7
Duzib248G0794 Durio zibethinus HOM05D004931 ORTHO05D006579 2.2e-29 132.1 74 83.8
HanXRQChr17g0559151 Helianthus annuus HOM05D004931 ORTHO05D006579 2.2e-29 132.1 91 69.2
Rhsim09G0128100 Rhododendron simsii HOM05D004931 ORTHO05D006579 2.9e-29 131.7 85 75.3
MSTRG.455 Avicennia marina HOM05D004931 ORTHO05D006579 3.8e-29 131.3 83 72.3
Cfa009447 Carpinus fangiana HOM05D004931 ORTHO05D006579 5.0e-29 131.0 83 73.5
DCAR_024966 Daucus carota HOM05D004931 ORTHO05D006579 6.5e-29 130.6 83 72.3
PSO017G2176 Papaver somniferum HOM05D004931 ORTHO05D006579 6.5e-29 130.6 83 72.3
Sp1g24310 Schrenkiella parvula HOM05D004931 ORTHO05D006579 8.5e-29 130.2 83 72.3
ClCG07G011910 Citrullus lanatus HOM05D004931 ORTHO05D006579 1.1e-28 129.8 87 73.6
SGA_v2.0_scaffold80G25951 Striga asiatica HOM05D004931 ORTHO05D006579 1.1e-28 129.8 83 69.9
unitig_8.g2895 Utricularia gibba HOM05D004931 ORTHO05D006579 1.9e-28 129.0 86 64.0
AL1G41640 Arabidopsis lyrata HOM05D004931 ORTHO05D006579 2.5e-28 128.6 83 73.5
Aqoxy5G03136 Aquilegia oxysepala HOM05D004931 ORTHO05D006579 3.2e-28 128.3 83 69.9
CDE05G1203 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 3.2e-28 128.3 83 69.9
PSO478G0594 Papaver somniferum HOM05D004931 ORTHO05D006579 3.2e-28 128.3 83 71.1
PGR102G0149 Punica granatum HOM05D004931 ORTHO05D006579 4.2e-28 127.9 85 69.4
vmacro10419 Vaccinium macrocarpon HOM05D004931 ORTHO05D006579 4.2e-28 127.9 85 72.9
Sc14g0009240 Simmondsia chinensis HOM05D004931 ORTHO05D006579 7.2e-28 127.1 83 68.7
EL10Ac6g13609 Beta vulgaris HOM05D004931 ORTHO05D006579 9.4e-28 126.7 83 67.5
Carub.0001s2655 Capsella rubella HOM05D004931 ORTHO05D006579 2.1e-27 125.6 83 71.1
CDE05G3195 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 2.7e-27 125.2 83 67.5
AT1G28120 Arabidopsis thaliana HOM05D004931 ORTHO05D006579 3.6e-27 124.8 83 71.1
Thhalv10008031m.g Eutrema salsugineum HOM05D004931 ORTHO05D006579 3.6e-27 124.8 83 69.9
Solyc04g045480.3 Solanum lycopersicum HOM05D004931 ORTHO05D006579 3.6e-27 124.8 83 67.5
BolC3t19725H Brassica oleracea HOM05D004931 ORTHO05D006579 4.7e-27 124.4 69 82.6
TPR.G27432 Trifolium pratense HOM05D004931 ORTHO05D006579 4.7e-27 124.4 93 69.9
ATR0582G144 Amborella trichopoda HOM05D004931 ORTHO05D006579 6.1e-27 124.0 83 68.7
Lj6A838G27 Lonicera japonica HOM05D004931 ORTHO05D006579 6.1e-27 124.0 118 55.9
BcaB03g12136 Brassica carinata HOM05D004931 ORTHO05D006579 8.0e-27 123.6 69 81.2
Potri.003G162600 Populus trichocarpa HOM05D004931 ORTHO05D006579 8.0e-27 123.6 85 71.8
A08p25870 Brassica napus HOM05D004931 ORTHO05D006579 1.0e-26 123.2 69 81.2
BraA08t34541Z Brassica rapa HOM05D004931 ORTHO05D006579 1.0e-26 123.2 69 81.2
MD00G1177400 Malus domestica HOM05D004931 ORTHO05D006579 1.0e-26 123.2 74 79.7
Sopen04g017340 Solanum pennellii HOM05D004931 ORTHO05D006579 1.0e-26 123.2 83 66.3
THA.LOC104814207 Tarenaya hassleriana HOM05D004931 ORTHO05D006579 1.8e-26 122.5 72 77.8
Ah.02g131420 Amaranthus hybridus HOM05D004931 ORTHO05D006579 2.3e-26 122.1 86 64.0
BcaC01g00008 Brassica carinata HOM05D004931 ORTHO05D006579 2.3e-26 122.1 69 79.7
C03p74760 Brassica napus HOM05D004931 ORTHO05D006579 2.3e-26 122.1 69 79.7
BcaC06g35334 Brassica carinata HOM05D004931 ORTHO05D006579 3.0e-26 121.7 65 84.6
C07p17280 Brassica napus HOM05D004931 ORTHO05D006579 3.0e-26 121.7 65 84.6
BolC7t42231H Brassica oleracea HOM05D004931 ORTHO05D006579 3.0e-26 121.7 65 84.6
SalBow2G3164 Salvia bowleyana HOM05D004931 ORTHO05D006579 3.0e-26 121.7 83 69.9
Aa31sc45G20 Aethionema arabicum HOM05D004931 ORTHO05D006579 4.0e-26 121.3 85 69.4
CARHR027590 Cardamine hirsuta HOM05D004931 ORTHO05D006579 1.2e-25 119.8 83 66.3
PGSC0003DMG401006689 Solanum tuberosum HOM05D004931 ORTHO05D006579 5.7e-25 117.5 89 62.9
MD13G1130400 Malus domestica HOM05D004931 ORTHO05D006579 1.3e-24 116.3 82 70.7
SEGI_13679 Sequoiadendron giganteum HOM05D004931 ORTHO05D006579 1.7e-24 115.9 90 60.0
Potri.001G067400 Populus trichocarpa HOM05D004931 ORTHO05D006579 2.2e-24 115.5 85 68.2
AUR62028841 Chenopodium quinoa HOM05D004931 ORTHO05D006579 2.8e-24 115.2 74 71.6
HPP92_011677 Vanilla planifolia HOM05D004931 ORTHO05D006579 1.4e-23 112.8 98 53.1
HPP92_011736 Vanilla planifolia HOM05D004931 ORTHO05D006579 1.4e-23 112.8 98 53.1
BcaB03g13953 Brassica carinata HOM05D004931 ORTHO05D006579 2.4e-23 112.1 70 70.0
Zm00001eb175560 Zea mays HOM05D004931 ORTHO05D006579 2.7e-22 108.6 64 76.6
Os08g0537800 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D006579 3.5e-22 108.2 85 61.2
Mapoly0005s0248 Marchantia polymorpha HOM05D004931 ORTHO05D006579 2.5e-20 102.1 78 57.7
Sabra01G0046800 Salix brachista HOM05D004931 ORTHO05D006579 3.2e-20 101.7 54 87.0
Nitab4.5_0001408g0040 Nicotiana tabacum HOM05D004931 ORTHO05D006579 4.2e-20 101.3 80 62.5
Nitab4.5_0007183g0010 Nicotiana tabacum HOM05D004931 ORTHO05D006579 7.2e-20 100.5 80 61.2
RcHm_v2.0_Chr4g0428911 Rosa chinensis HOM05D004931 ORTHO05D006579 9.4e-20 100.1 66 75.8
Pp3c5_2520 Physcomitrium patens HOM05D004931 ORTHO05D006579 8.0e-19 97.1 80 56.2
MBI10_g42797_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 1.2e-17 93.2 75 64.0
Zm00001eb037020 Zea mays HOM05D004931 ORTHO05D006579 5.7e-17 90.9 61 67.2
Cre10.g441500 Chlamydomonas reinhardtii HOM05D004931 ORTHO05D006579 1.2e-14 83.2 76 47.4
Pp3c6_24540 Physcomitrium patens HOM05D004931 ORTHO05D006579 1.6e-14 82.8 57 63.2
AagrBONN_evm.TU.Sc2ySwM_368.2426 Anthoceros agrestis HOM05D004931 ORTHO05D006579 2.0e-14 82.4 53 67.9
SMO358G0085 Selaginella moellendorffii HOM05D004931 ORTHO05D006579 4.5e-14 81.3 53 67.9
CAN.G465.9 Capsicum annuum HOM05D004931 ORTHO05D006579 1.3e-13 79.7 46 76.1
PRCOL_00001027 Prasinoderma coloniale HOM05D004931 ORTHO05D006579 2.3e-10 68.9 58 55.2
Haze_27431 Corylus avellana HOM05D004931 ORTHO05D006579 2.0e-09 65.9 77 41.6
BcaB03g12135 Brassica carinata HOM05D004931 ORTHO05D006579 7.5e-09 63.9 39 74.4
Actinidia31350 Actinidia chinensis HOM05D004931 ORTHO05D006579 2.2e-08 62.4 42 71.4
RcHm_v2.0_Chr7g0205601 Rosa chinensis HOM05D004931 ORTHO05D006579 2.2e-08 62.4 31 83.9
Hund26708 Selenicereus undatus HOM05D004931 ORTHO05D006579 6.3e-08 60.8 34 82.4
Peaxi162Scf00128g01757 Petunia axillaris HOM05D004931 ORTHO05D006579 3.1e-07 58.5 35 71.4
AagrBONN_evm.TU.Sc2ySwM_26.3 Anthoceros agrestis HOM05D004931 ORTHO05D006579 2.7e-06 55.5 26 84.6
FAN01G2784 Fragaria x ananassa HOM05D005362 ORTHO05D006895 4.5e-06 54.7 82 37.8


User provided reference genes

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