Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 0.0e+00 1097.0 538 100.0
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 2.3e-304 1048.1 540 95.4
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.1e-301 1039.3 538 93.3
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 2.3e-296 1021.5 536 91.6
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 9.6e-295 1016.1 536 91.4
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 1.8e-285 985.3 540 89.3
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 2.9e-283 978.0 537 88.1
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 5.3e-277 957.2 539 87.4
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 8.0e-257 890.2 494 87.4
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.8e-256 889.0 536 79.7
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 1.8e-256 889.0 536 81.2
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 1.1e-255 886.3 536 80.0
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 3.7e-254 881.3 545 79.1
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 6.3e-254 880.6 543 78.6
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 1.1e-253 879.8 536 79.3
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 4.1e-253 877.9 536 79.5
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 9.1e-253 876.7 536 79.7
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 2.0e-252 875.5 535 80.0
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 1.7e-251 872.5 534 79.2
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 8.5e-251 870.2 536 78.5
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 6.7e-248 860.5 560 75.4
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 6.3e-246 854.0 536 76.7
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 1.1e-245 853.2 536 75.9
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 1.8e-245 852.4 619 69.5
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 4.5e-244 847.8 536 76.3
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 8.5e-243 843.6 537 76.5
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 6.1e-241 837.4 536 75.7
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.8e-240 835.9 537 77.3
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 2.4e-237 825.5 544 76.1
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 5.4e-237 824.3 536 74.3
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 7.0e-237 823.9 536 75.9
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 7.0e-237 823.9 536 75.0
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 1.6e-236 822.8 534 75.5
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 1.7e-235 819.3 538 73.8
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 6.6e-235 817.4 536 74.6
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 6.1e-233 810.8 538 74.0
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 1.0e-232 810.1 523 74.6
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 5.2e-232 807.7 537 73.6
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 5.2e-232 807.7 535 73.6
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 4.4e-231 804.7 537 73.6
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 5.7e-231 804.3 538 74.3
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.3e-230 803.1 539 72.9
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 1.7e-230 802.7 540 73.3
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 6.3e-230 800.8 537 70.6
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 1.1e-229 800.0 539 72.5
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 1.1e-229 800.0 538 73.4
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 1.6e-228 796.2 539 73.1
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 3.5e-228 795.0 541 72.8
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.0e-227 793.5 541 72.8
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 2.3e-227 792.3 539 72.9
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 8.6e-227 790.4 538 72.9
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.5e-226 789.6 541 72.5
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 9.5e-226 786.9 543 72.6
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 2.8e-225 785.4 543 71.3
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 4.7e-225 784.6 536 72.2
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 8.9e-224 780.4 539 71.8
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 1.5e-223 779.6 539 71.6
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 2.0e-223 779.2 539 71.6
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 9.8e-223 776.9 571 68.3
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 1.3e-222 776.5 544 72.8
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 5.4e-221 771.2 618 65.2
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 9.2e-221 770.4 545 69.7
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 3.0e-219 765.4 538 70.3
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 3.9e-219 765.0 544 69.9
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.1e-218 763.5 539 70.5
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 9.8e-215 750.4 542 69.4
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 8.3e-214 747.3 553 66.2
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 1.2e-212 743.4 474 76.2
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 6.0e-212 741.1 537 66.5
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 9.5e-210 733.8 542 68.1
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 1.6e-209 733.0 538 68.8
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 6.2e-209 731.1 536 68.8
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 4.0e-208 728.4 579 63.4
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 4.0e-208 728.4 579 63.4
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 9.9e-207 723.8 461 74.8
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 4.9e-206 721.5 538 65.6
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 1.2e-204 716.8 538 65.2
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 3.3e-202 708.8 491 69.9
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.3e-198 696.8 649 56.5
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.2e-198 696.0 599 61.8
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 6.4e-198 694.5 436 81.0
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.7e-195 686.4 538 65.8
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 5.1e-195 684.9 536 65.7
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 5.6e-194 681.4 441 76.6
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 3.1e-192 675.6 606 58.9
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.7e-190 669.8 490 65.5
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.3e-187 659.4 412 77.7
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 3.6e-185 652.1 459 70.8
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 1.5e-178 630.2 538 60.6
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.7e-174 616.7 536 59.0
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 4.3e-162 575.5 555 53.0
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.7e-156 556.2 489 58.3
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 8.5e-150 534.6 343 76.7
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 3.7e-145 519.2 348 75.3
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 2.4e-136 490.0 509 53.0
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 6.8e-131 471.9 300 74.3
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.1e-128 464.5 887 34.5
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 4.1e-128 462.6 308 73.7
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 2.3e-123 446.8 961 31.8
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 6.8e-123 445.3 373 61.4
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 1.5e-122 444.1 973 31.9
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.6e-122 443.4 895 33.1
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.2e-121 440.3 850 34.8
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 3.5e-119 433.0 285 72.6
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 4.9e-113 412.5 246 77.6
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.4e-112 410.2 311 66.9
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.9e-110 403.3 307 65.5
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.3e-107 393.7 234 81.2
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 3.6e-92 343.2 263 63.5
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 5.1e-86 322.8 196 80.1
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 7.6e-74 282.3 292 53.8
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 3.2e-72 276.9 170 78.2
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 3.5e-71 273.5 1178 23.1
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 1.4e-35 155.2 789 22.4
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 5.3e-35 153.3 129 60.5
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 6.7e-30 136.3 80 82.5
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 5.0e-25 120.2 68 86.8
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 4.4e-21 107.1 103 52.4
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 6.3e-20 103.2 249 26.5
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.6e-18 98.6 246 28.5
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 2.5e-16 91.3 97 51.5
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 5.2e-14 83.6 67 70.1
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 2.4e-11 74.7 333 22.2
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 6.5e-09 66.6 34 85.3
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 1.1e-08 65.9 50 68.0
arahy.Tifrunner.gnm1.ann1.505PCM Arachis hypogaea HOM05D003289 ORTHO05D016559 4.2e-08 63.9 42 61.9
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 2.1e-07 61.6 39 74.4


User provided reference genes

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